RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 KRTAP19-2Q3LHN2 52 aa9.88□□□□□ -0.83
CASC4-209ENST00000559222 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
CASC4-209ENST00000559222 C20orf166-AS1Q96NR2 134 aa9.87□□□□□ -0.83
CASC4-209ENST00000559222 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
CASC4-209ENST00000559222 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
CASC4-209ENST00000559222 A8MUU9 505 aa9.86□□□□□ -0.83
CASC4-209ENST00000559222 IGHV6-1A0A0B4J1U7 121 aa9.85□□□□□ -0.83
CASC4-209ENST00000559222 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
CASC4-209ENST00000559222 K7EP34 96 aa9.83□□□□□ -0.84
CASC4-209ENST00000559222 PDE6GP18545 87 aa9.83□□□□□ -0.84
CASC4-209ENST00000559222 LINC00313P59037 77 aa9.83□□□□□ -0.84
CASC4-209ENST00000559222 PRO0461Q9UI25 63 aa9.83□□□□□ -0.84
CASC4-209ENST00000559222 A0A1B0GVX0 72 aa9.81□□□□□ -0.84
CASC4-209ENST00000559222 C21orf62-AS1Q17RA5 79 aa9.79□□□□□ -0.84
CASC4-209ENST00000559222 ATP11AUNQ6ZP68 121 aa9.79□□□□□ -0.84
CASC4-209ENST00000559222 A0A1B0GW54 56 aa9.77□□□□□ -0.85
CASC4-209ENST00000559222 J3KT08 172 aa9.76□□□□□ -0.85
CASC4-209ENST00000559222 FSIP2Q5CZC0 6907 aa9.74□□□□□ -0.85
CASC4-209ENST00000559222 IGKV3D-7A0A0C4DH55 119 aa9.73□□□□□ -0.85
CASC4-209ENST00000559222 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
CASC4-209ENST00000559222 NREPQ16612 68 aa9.72□□□□□ -0.85
CASC4-209ENST00000559222 A8MWP4 228 aa9.71□□□□□ -0.86
CASC4-209ENST00000559222 C8orf17Q9NRJ1 99 aa9.68□□□□□ -0.86
CASC4-209ENST00000559222 MT1HP80294 61 aa9.67□□□□□ -0.86
CASC4-209ENST00000559222 NDUFB1O75438 58 aa9.66□□□□□ -0.86
CASC4-209ENST00000559222 GTF2H5Q6ZYL4 71 aa9.66□□□□□ -0.86
CASC4-209ENST00000559222 Q6ZVQ6 151 aa9.64□□□□□ -0.87
CASC4-209ENST00000559222 PRR15Q8IV56 129 aa9.64□□□□□ -0.87
CASC4-209ENST00000559222 K7EQZ3 153 aa9.63□□□□□ -0.87
CASC4-209ENST00000559222 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
CASC4-209ENST00000559222 CRCT1Q9UGL9 99 aa9.6□□□□□ -0.87
CASC4-209ENST00000559222 FLGP20930 4061 aaPredicted RBP9.6□□□□□ -0.87
CASC4-209ENST00000559222 LINC00846Q9NV44 126 aa9.59□□□□□ -0.87
CASC4-209ENST00000559222 ETDBQ3ZM63 59 aa9.58□□□□□ -0.88
CASC4-209ENST00000559222 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
CASC4-209ENST00000559222 Q8N9L7 120 aa9.58□□□□□ -0.88
CASC4-209ENST00000559222 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
CASC4-209ENST00000559222 F8W1H4 67 aa9.57□□□□□ -0.88
CASC4-209ENST00000559222 BPY2O14599 106 aa9.57□□□□□ -0.88
CASC4-209ENST00000559222 ZCCHC13Q8WW36 166 aaKnown RBP9.56□□□□□ -0.88
CASC4-209ENST00000559222 HRES1P13985 223 aa9.51□□□□□ -0.89
CASC4-209ENST00000559222 TMEM254Q8TBM7 123 aa9.51□□□□□ -0.89
CASC4-209ENST00000559222 MRPL34Q9BQ48 92 aaKnown RBP9.5□□□□□ -0.89
CASC4-209ENST00000559222 hDV103S1A0JD37 113 aa9.49□□□□□ -0.89
CASC4-209ENST00000559222 UBL5Q9BZL1 73 aa9.47□□□□□ -0.89
CASC4-209ENST00000559222 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.9
CASC4-209ENST00000559222 MPLKIPQ8TAP9 179 aa9.46□□□□□ -0.9
CASC4-209ENST00000559222 A0A1B0GV90 55 aa9.44□□□□□ -0.9
CASC4-209ENST00000559222 KRTAP10-6P60371 365 aaPredicted RBP9.43□□□□□ -0.9
CASC4-209ENST00000559222 M0R2T5 61 aa9.42□□□□□ -0.9
CASC4-209ENST00000559222 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
CASC4-209ENST00000559222 SPINK7P58062 85 aa9.42□□□□□ -0.9
CASC4-209ENST00000559222 NDUFS5O43920 106 aa9.41□□□□□ -0.9
CASC4-209ENST00000559222 CASC2Q6XLA1 102 aa9.4□□□□□ -0.9
CASC4-209ENST00000559222 Q5W150 140 aa9.37□□□□□ -0.91
CASC4-209ENST00000559222 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
CASC4-209ENST00000559222 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
CASC4-209ENST00000559222 HCG22E2RYF7 251 aa9.35□□□□□ -0.91
CASC4-209ENST00000559222 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
CASC4-209ENST00000559222 CXCL6P80162 114 aa9.3□□□□□ -0.92
CASC4-209ENST00000559222 IGKV2D-30A0A075B6S6 120 aa9.25□□□□□ -0.93
CASC4-209ENST00000559222 FAM240AA0A1B0GVK7 77 aa9.25□□□□□ -0.93
CASC4-209ENST00000559222 IGKV2-30P06310 120 aa9.25□□□□□ -0.93
CASC4-209ENST00000559222 ACYP1P07311 99 aa9.24□□□□□ -0.93
CASC4-209ENST00000559222 KRTAP9-8Q9BYQ0 159 aa9.19□□□□□ -0.94
CASC4-209ENST00000559222 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
CASC4-209ENST00000559222 ATP5EP2Q5VTU8 51 aa9.13□□□□□ -0.95
CASC4-209ENST00000559222 MT2AP02795 61 aa9.1□□□□□ -0.95
CASC4-209ENST00000559222 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
CASC4-209ENST00000559222 A0A087WVE0 104 aa9.09□□□□□ -0.95
CASC4-209ENST00000559222 KRTAP9-7A8MTY7 169 aa9.07□□□□□ -0.96
CASC4-209ENST00000559222 C4orf26Q17RF5 130 aa9.07□□□□□ -0.96
CASC4-209ENST00000559222 LINC00643Q86TS7 51 aa9.07□□□□□ -0.96
CASC4-209ENST00000559222 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
CASC4-209ENST00000559222 MT1FP04733 61 aa9.04□□□□□ -0.96
CASC4-209ENST00000559222 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
CASC4-209ENST00000559222 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
CASC4-209ENST00000559222 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.98□□□□□ -0.97
CASC4-209ENST00000559222 TRAV22A0A0B4J277 110 aa8.96□□□□□ -0.98
CASC4-209ENST00000559222 J3QR89 54 aa8.94□□□□□ -0.98
CASC4-209ENST00000559222 CYP4F30PQ9H0H9 118 aa8.93□□□□□ -0.98
CASC4-209ENST00000559222 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
CASC4-209ENST00000559222 H0Y9P7 68 aa8.9□□□□□ -0.98
CASC4-209ENST00000559222 UQCRQO14949 82 aa8.9□□□□□ -0.98
CASC4-209ENST00000559222 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.98
CASC4-209ENST00000559222 KRTAP9-3Q9BYQ3 159 aa8.89□□□□□ -0.99
CASC4-209ENST00000559222 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
CASC4-209ENST00000559222 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
CASC4-209ENST00000559222 USH2AO75445 5202 aa8.84□□□□□ -0.99
CASC4-209ENST00000559222 LCE2BO14633 110 aa8.83□□□□□ -1
CASC4-209ENST00000559222 C5orf47Q569G3 176 aa8.81□□□□□ -1
CASC4-209ENST00000559222 S4R3F8 94 aa8.8□□□□□ -1
CASC4-209ENST00000559222 LCA10Q71F78 164 aa8.79□□□□□ -1
CASC4-209ENST00000559222 ATOX1O00244 68 aa8.78□□□□□ -1
CASC4-209ENST00000559222 MT-ATP8P03928 68 aa8.78□□□□□ -1
CASC4-209ENST00000559222 SSPOA2VEC9 5147 aa8.78□□□□□ -1
CASC4-209ENST00000559222 LINC00208Q96KT6 92 aa8.77□□□□□ -1.01
CASC4-209ENST00000559222 K7ERU9 68 aa8.75□□□□□ -1.01
CASC4-209ENST00000559222 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
CASC4-209ENST00000559222 MP68P56378 58 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms