RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 SEC61BP60468 96 aaKnown RBP12.99□□□□□ -0.33
RCCD1-206ENST00000556618 Q6ZVQ6 151 aa12.98□□□□□ -0.33
RCCD1-206ENST00000556618 LINC00846Q9NV44 126 aa12.98□□□□□ -0.33
RCCD1-206ENST00000556618 NOTCH2NLQ7Z3S9 236 aa12.97□□□□□ -0.33
RCCD1-206ENST00000556618 A8MWP4 228 aa12.95□□□□□ -0.34
RCCD1-206ENST00000556618 NDUFB1O75438 58 aa12.95□□□□□ -0.34
RCCD1-206ENST00000556618 RPL37P61927 97 aaKnown RBP12.95□□□□□ -0.34
RCCD1-206ENST00000556618 MUC2Q02817 5179 aa12.93□□□□□ -0.34
RCCD1-206ENST00000556618 IGKV3D-7A0A0C4DH55 119 aa12.92□□□□□ -0.34
RCCD1-206ENST00000556618 C8orf87E5RJ46 101 aa12.91□□□□□ -0.34
RCCD1-206ENST00000556618 UBL5Q9BZL1 73 aa12.91□□□□□ -0.34
RCCD1-206ENST00000556618 BPY2O14599 106 aa12.9□□□□□ -0.34
RCCD1-206ENST00000556618 Q75L30 129 aa12.9□□□□□ -0.34
RCCD1-206ENST00000556618 KRTAP16-1A8MUX0 517 aa12.9□□□□□ -0.35
RCCD1-206ENST00000556618 PCOTHQ58A44 107 aa12.89□□□□□ -0.35
RCCD1-206ENST00000556618 C20orf166-AS1Q96NR2 134 aa12.89□□□□□ -0.35
RCCD1-206ENST00000556618 PRR15Q8IV56 129 aa12.87□□□□□ -0.35
RCCD1-206ENST00000556618 A8MUU9 505 aa12.86□□□□□ -0.35
RCCD1-206ENST00000556618 C8orf17Q9NRJ1 99 aa12.83□□□□□ -0.36
RCCD1-206ENST00000556618 K7EQZ3 153 aa12.82□□□□□ -0.36
RCCD1-206ENST00000556618 ACYP1P07311 99 aa12.81□□□□□ -0.36
RCCD1-206ENST00000556618 KRTAP4-1Q9BYQ7 146 aa12.8□□□□□ -0.36
RCCD1-206ENST00000556618 FAM240AA0A1B0GVK7 77 aa12.79□□□□□ -0.36
RCCD1-206ENST00000556618 ATP11AUNQ6ZP68 121 aa12.78□□□□□ -0.36
RCCD1-206ENST00000556618 Q8N9L7 120 aa12.75□□□□□ -0.37
RCCD1-206ENST00000556618 MMP24-AS1A0A0U1RRL7 71 aa12.73□□□□□ -0.37
RCCD1-206ENST00000556618 Q8N9P0 234 aaPredicted RBP12.69□□□□□ -0.38
RCCD1-206ENST00000556618 CXCL6P80162 114 aa12.69□□□□□ -0.38
RCCD1-206ENST00000556618 hDV103S1A0JD37 113 aa12.67□□□□□ -0.38
RCCD1-206ENST00000556618 TMEM254Q8TBM7 123 aa12.67□□□□□ -0.38
RCCD1-206ENST00000556618 MRPL34Q9BQ48 92 aaKnown RBP12.64□□□□□ -0.39
RCCD1-206ENST00000556618 J3QR89 54 aa12.61□□□□□ -0.39
RCCD1-206ENST00000556618 WFDC13Q8IUB5 93 aa12.6□□□□□ -0.39
RCCD1-206ENST00000556618 CASC2Q6XLA1 102 aa12.59□□□□□ -0.39
RCCD1-206ENST00000556618 FAT4Q6V0I7 4981 aa12.59□□□□□ -0.39
RCCD1-206ENST00000556618 ZCCHC13Q8WW36 166 aaKnown RBP12.56□□□□□ -0.4
RCCD1-206ENST00000556618 A0A0U1RQV1 116 aa12.56□□□□□ -0.4
RCCD1-206ENST00000556618 HCG22E2RYF7 251 aa12.56□□□□□ -0.4
RCCD1-206ENST00000556618 ATP5EP2Q5VTU8 51 aa12.56□□□□□ -0.4
RCCD1-206ENST00000556618 LINC00643Q86TS7 51 aa12.54□□□□□ -0.4
RCCD1-206ENST00000556618 NDUFS5O43920 106 aa12.52□□□□□ -0.41
RCCD1-206ENST00000556618 HIST1H4AP62805 103 aaKnown RBP12.42□□□□□ -0.42
RCCD1-206ENST00000556618 KRTAP19-2Q3LHN2 52 aa12.41□□□□□ -0.42
RCCD1-206ENST00000556618 K7ERU9 68 aa12.4□□□□□ -0.42
RCCD1-206ENST00000556618 Q5W150 140 aa12.36□□□□□ -0.43
RCCD1-206ENST00000556618 LCE2CQ5TA81 110 aa12.35□□□□□ -0.43
RCCD1-206ENST00000556618 SPINK7P58062 85 aa12.35□□□□□ -0.43
RCCD1-206ENST00000556618 A0A087WVE0 104 aa12.31□□□□□ -0.44
RCCD1-206ENST00000556618 HRES1P13985 223 aa12.29□□□□□ -0.44
RCCD1-206ENST00000556618 TP53AIP1Q9HCN2 124 aa12.29□□□□□ -0.44
RCCD1-206ENST00000556618 COX6B2Q6YFQ2 88 aa12.26□□□□□ -0.45
RCCD1-206ENST00000556618 LCE2AQ5TA79 106 aaPredicted RBP12.26□□□□□ -0.45
RCCD1-206ENST00000556618 MPLKIPQ8TAP9 179 aa12.23□□□□□ -0.45
RCCD1-206ENST00000556618 FLGP20930 4061 aaPredicted RBP12.23□□□□□ -0.45
RCCD1-206ENST00000556618 RBM12B-AS1Q9P1G2 102 aa12.19□□□□□ -0.46
RCCD1-206ENST00000556618 IGKV2D-30A0A075B6S6 120 aa12.18□□□□□ -0.46
RCCD1-206ENST00000556618 IGKV2-30P06310 120 aa12.18□□□□□ -0.46
RCCD1-206ENST00000556618 C7orf65Q6ZTY9 151 aa12.17□□□□□ -0.46
RCCD1-206ENST00000556618 MT-ATP8P03928 68 aa12.15□□□□□ -0.46
RCCD1-206ENST00000556618 MT1HP80294 61 aa12.15□□□□□ -0.46
RCCD1-206ENST00000556618 IMUPQ9GZP8 106 aa12.13□□□□□ -0.47
RCCD1-206ENST00000556618 FAM236DA0A1B0GTK5 79 aa12.11□□□□□ -0.47
RCCD1-206ENST00000556618 FAM236CP0DP71 79 aa12.11□□□□□ -0.47
RCCD1-206ENST00000556618 UQCRQO14949 82 aa12.09□□□□□ -0.47
RCCD1-206ENST00000556618 TRAV22A0A0B4J277 110 aa12.08□□□□□ -0.48
RCCD1-206ENST00000556618 OCR1Q9BZK8 76 aa12.03□□□□□ -0.48
RCCD1-206ENST00000556618 SCGB1A1P11684 91 aa11.99□□□□□ -0.49
RCCD1-206ENST00000556618 H0Y9P7 68 aa11.98□□□□□ -0.49
RCCD1-206ENST00000556618 LOC101927531A0A1B0GV80 90 aa11.96□□□□□ -0.5
RCCD1-206ENST00000556618 M0R2T5 61 aa11.96□□□□□ -0.5
RCCD1-206ENST00000556618 ATOX1O00244 68 aa11.96□□□□□ -0.5
RCCD1-206ENST00000556618 CYP4F30PQ9H0H9 118 aa11.96□□□□□ -0.5
RCCD1-206ENST00000556618 C4orf26Q17RF5 130 aa11.93□□□□□ -0.5
RCCD1-206ENST00000556618 FAM236AA0A1B0GUQ0 79 aa11.9□□□□□ -0.5
RCCD1-206ENST00000556618 FAM236BA0A1B0GV22 79 aa11.9□□□□□ -0.5
RCCD1-206ENST00000556618 C5orf47Q569G3 176 aa11.88□□□□□ -0.51
RCCD1-206ENST00000556618 MP68P56378 58 aa11.86□□□□□ -0.51
RCCD1-206ENST00000556618 C1orf64Q8NEQ6 169 aa11.86□□□□□ -0.51
RCCD1-206ENST00000556618 LINC00208Q96KT6 92 aa11.85□□□□□ -0.51
RCCD1-206ENST00000556618 H1FX-AS1Q4G0G2 97 aa11.84□□□□□ -0.51
RCCD1-206ENST00000556618 KRTAP10-6P60371 365 aaPredicted RBP11.83□□□□□ -0.52
RCCD1-206ENST00000556618 SMIM20Q8N5G0 67 aa11.79□□□□□ -0.52
RCCD1-206ENST00000556618 LORP23490 312 aaPredicted RBP11.79□□□□□ -0.52
RCCD1-206ENST00000556618 KRTAP3-1Q9BYR8 98 aa11.79□□□□□ -0.52
RCCD1-206ENST00000556618 H3BPC8 53 aa11.77□□□□□ -0.53
RCCD1-206ENST00000556618 TRAV7A0A075B6U4 112 aa11.76□□□□□ -0.53
RCCD1-206ENST00000556618 KLKP1Q107X0 134 aa11.71□□□□□ -0.54
RCCD1-206ENST00000556618 KRTAP9-8Q9BYQ0 159 aa11.59□□□□□ -0.55
RCCD1-206ENST00000556618 SERP2Q8N6R1 65 aa11.58□□□□□ -0.56
RCCD1-206ENST00000556618 S4R3F8 94 aa11.56□□□□□ -0.56
RCCD1-206ENST00000556618 A8MUN3 132 aa11.5□□□□□ -0.57
RCCD1-206ENST00000556618 LCA10Q71F78 164 aa11.5□□□□□ -0.57
RCCD1-206ENST00000556618 MT2AP02795 61 aa11.48□□□□□ -0.57
RCCD1-206ENST00000556618 SNURFQ9Y675 71 aa11.46□□□□□ -0.57
RCCD1-206ENST00000556618 C20orf197Q8N268 126 aa11.44□□□□□ -0.58
RCCD1-206ENST00000556618 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
RCCD1-206ENST00000556618 CSAG1Q6PB30 78 aa11.41□□□□□ -0.58
RCCD1-206ENST00000556618 KRTAP9-2Q9BYQ4 174 aa11.41□□□□□ -0.58
RCCD1-206ENST00000556618 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
RCCD1-206ENST00000556618 MT1FP04733 61 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms