RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 COX6CP09669 75 aa9.29□□□□□ -0.92
CDKN3-209ENST00000556102 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
CDKN3-209ENST00000556102 UBE2V1Q13404 147 aa9.28□□□□□ -0.92
CDKN3-209ENST00000556102 K7ERJ3 54 aa9.27□□□□□ -0.93
CDKN3-209ENST00000556102 HSD52Q0P140 79 aa9.27□□□□□ -0.93
CDKN3-209ENST00000556102 KRTAP19-1Q8IUB9 90 aa9.27□□□□□ -0.93
CDKN3-209ENST00000556102 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
CDKN3-209ENST00000556102 MTURNQ8N3F0 131 aa9.25□□□□□ -0.93
CDKN3-209ENST00000556102 VPS25Q9BRG1 176 aa9.24□□□□□ -0.93
CDKN3-209ENST00000556102 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
CDKN3-209ENST00000556102 RBM3P98179 157 aaKnown RBP9.2□□□□□ -0.94
CDKN3-209ENST00000556102 DSCR8Q96T75 97 aa9.19□□□□□ -0.94
CDKN3-209ENST00000556102 J3KT08 172 aa9.18□□□□□ -0.94
CDKN3-209ENST00000556102 SPINK7P58062 85 aa9.17□□□□□ -0.94
CDKN3-209ENST00000556102 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
CDKN3-209ENST00000556102 PYY3Q5JQD4 70 aa9.15□□□□□ -0.94
CDKN3-209ENST00000556102 SCGB1C2P0DMR2 95 aa9.13□□□□□ -0.95
CDKN3-209ENST00000556102 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
CDKN3-209ENST00000556102 C9JAW5 83 aa9.12□□□□□ -0.95
CDKN3-209ENST00000556102 NDUFB1O75438 58 aa9.11□□□□□ -0.95
CDKN3-209ENST00000556102 Q6ZQT0 140 aa9.11□□□□□ -0.95
CDKN3-209ENST00000556102 BAALC-AS2P0C853 105 aa9.09□□□□□ -0.95
CDKN3-209ENST00000556102 UQCR10Q9UDW1 63 aa9.09□□□□□ -0.95
CDKN3-209ENST00000556102 LINC00846Q9NV44 126 aa9.08□□□□□ -0.96
CDKN3-209ENST00000556102 A8MWP4 228 aa9.07□□□□□ -0.96
CDKN3-209ENST00000556102 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
CDKN3-209ENST00000556102 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
CDKN3-209ENST00000556102 KRTAP19-6Q3LI70 58 aa9.05□□□□□ -0.96
CDKN3-209ENST00000556102 LYRM7Q5U5X0 104 aa9.04□□□□□ -0.96
CDKN3-209ENST00000556102 MACF1Q9UPN3 7388 aaKnown RBP9.01□□□□□ -0.97
CDKN3-209ENST00000556102 A0A1B0GW54 56 aa9.01□□□□□ -0.97
CDKN3-209ENST00000556102 IGKV3D-7A0A0C4DH55 119 aa9□□□□□ -0.97
CDKN3-209ENST00000556102 JMJD7-PLA2G4BH0Y9G9 81 aa8.99□□□□□ -0.97
CDKN3-209ENST00000556102 LOC110117498A0A087WWA1 95 aa8.98□□□□□ -0.97
CDKN3-209ENST00000556102 Q6ZVQ6 151 aa8.98□□□□□ -0.97
CDKN3-209ENST00000556102 ATXN8Q156A1 80 aa8.95□□□□□ -0.98
CDKN3-209ENST00000556102 PDE6GP18545 87 aa8.94□□□□□ -0.98
CDKN3-209ENST00000556102 PRR15Q8IV56 129 aa8.93□□□□□ -0.98
CDKN3-209ENST00000556102 TMEM254Q8TBM7 123 aa8.9□□□□□ -0.98
CDKN3-209ENST00000556102 MRPL34Q9BQ48 92 aaKnown RBP8.9□□□□□ -0.98
CDKN3-209ENST00000556102 C14orf132Q9NPU4 83 aa8.9□□□□□ -0.98
CDKN3-209ENST00000556102 SYNE2Q8WXH0 6885 aaKnown RBP8.9□□□□□ -0.98
CDKN3-209ENST00000556102 H1FX-AS1Q4G0G2 97 aa8.89□□□□□ -0.99
CDKN3-209ENST00000556102 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
CDKN3-209ENST00000556102 MMP24-AS1A0A0U1RRL7 71 aa8.88□□□□□ -0.99
CDKN3-209ENST00000556102 NREPQ16612 68 aa8.88□□□□□ -0.99
CDKN3-209ENST00000556102 M0R143 59 aa8.85□□□□□ -0.99
CDKN3-209ENST00000556102 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
CDKN3-209ENST00000556102 hDV103S1A0JD37 113 aa8.82□□□□□ -1
CDKN3-209ENST00000556102 NDUFS5O43920 106 aa8.81□□□□□ -1
CDKN3-209ENST00000556102 K7EQZ3 153 aa8.79□□□□□ -1
CDKN3-209ENST00000556102 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
CDKN3-209ENST00000556102 IGKV2-30P06310 120 aa8.77□□□□□ -1.01
CDKN3-209ENST00000556102 KRTAP6-3Q3LI67 103 aa8.77□□□□□ -1.01
CDKN3-209ENST00000556102 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
CDKN3-209ENST00000556102 Q5W150 140 aa8.72□□□□□ -1.01
CDKN3-209ENST00000556102 BPY2O14599 106 aa8.69□□□□□ -1.02
CDKN3-209ENST00000556102 H3BT86 120 aa8.66□□□□□ -1.02
CDKN3-209ENST00000556102 C4orf26Q17RF5 130 aa8.63□□□□□ -1.03
CDKN3-209ENST00000556102 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
CDKN3-209ENST00000556102 HCG22E2RYF7 251 aa8.62□□□□□ -1.03
CDKN3-209ENST00000556102 Q8N9L7 120 aa8.61□□□□□ -1.03
CDKN3-209ENST00000556102 BATFQ16520 125 aa8.6□□□□□ -1.03
CDKN3-209ENST00000556102 CXCL6P80162 114 aa8.58□□□□□ -1.04
CDKN3-209ENST00000556102 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
CDKN3-209ENST00000556102 TSTD3H0UI37 97 aa8.57□□□□□ -1.04
CDKN3-209ENST00000556102 SMIM6P0DI80 62 aa8.57□□□□□ -1.04
CDKN3-209ENST00000556102 FAM236AA0A1B0GUQ0 79 aa8.56□□□□□ -1.04
CDKN3-209ENST00000556102 FAM236BA0A1B0GV22 79 aa8.56□□□□□ -1.04
CDKN3-209ENST00000556102 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
CDKN3-209ENST00000556102 A0A1W2PPM0 123 aa8.53□□□□□ -1.04
CDKN3-209ENST00000556102 A6NN06 94 aa8.53□□□□□ -1.04
CDKN3-209ENST00000556102 MT1BP07438 61 aa8.52□□□□□ -1.05
CDKN3-209ENST00000556102 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
CDKN3-209ENST00000556102 S4R3F8 94 aa8.51□□□□□ -1.05
CDKN3-209ENST00000556102 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
CDKN3-209ENST00000556102 Q5VV11 94 aa8.49□□□□□ -1.05
CDKN3-209ENST00000556102 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
CDKN3-209ENST00000556102 KRTAP19-8Q3LI54 63 aa8.47□□□□□ -1.05
CDKN3-209ENST00000556102 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
CDKN3-209ENST00000556102 MUC12Q9UKN1 5478 aa8.46□□□□□ -1.06
CDKN3-209ENST00000556102 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
CDKN3-209ENST00000556102 LCA10Q71F78 164 aa8.44□□□□□ -1.06
CDKN3-209ENST00000556102 NEBP20929 6669 aa8.44□□□□□ -1.06
CDKN3-209ENST00000556102 UBL5Q9BZL1 73 aa8.42□□□□□ -1.06
CDKN3-209ENST00000556102 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.06
CDKN3-209ENST00000556102 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
CDKN3-209ENST00000556102 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
CDKN3-209ENST00000556102 TP53AIP1Q9HCN2 124 aa8.34□□□□□ -1.07
CDKN3-209ENST00000556102 PRO0461Q9UI25 63 aa8.28□□□□□ -1.08
CDKN3-209ENST00000556102 KRTAP5-9P26371 169 aa8.26□□□□□ -1.09
CDKN3-209ENST00000556102 KRTAP20-1Q3LI63 56 aa8.25□□□□□ -1.09
CDKN3-209ENST00000556102 CRIPTQ9P021 101 aa8.24□□□□□ -1.09
CDKN3-209ENST00000556102 KMT2DO14686 5537 aa8.21□□□□□ -1.1
CDKN3-209ENST00000556102 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
CDKN3-209ENST00000556102 IMUPQ9GZP8 106 aa8.2□□□□□ -1.1
CDKN3-209ENST00000556102 MDN1Q9NU22 5596 aa8.19□□□□□ -1.1
CDKN3-209ENST00000556102 K7EP34 96 aa8.19□□□□□ -1.1
CDKN3-209ENST00000556102 A0A087WVE0 104 aa8.17□□□□□ -1.1
CDKN3-209ENST00000556102 LOC105371267A0A1B0GV96 52 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms