RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 C14orf132Q9NPU4 83 aa10.51□□□□□ -0.73
HIF1A-206ENST00000553999 Q6ZQT0 140 aa10.5□□□□□ -0.73
HIF1A-206ENST00000553999 FAM236DA0A1B0GTK5 79 aa10.49□□□□□ -0.73
HIF1A-206ENST00000553999 FAM236CP0DP71 79 aa10.49□□□□□ -0.73
HIF1A-206ENST00000553999 C8orf87E5RJ46 101 aa10.47□□□□□ -0.73
HIF1A-206ENST00000553999 JMJD7-PLA2G4BH0Y9G9 81 aa10.47□□□□□ -0.73
HIF1A-206ENST00000553999 MTURNQ8N3F0 131 aa10.46□□□□□ -0.73
HIF1A-206ENST00000553999 CRCT1Q9UGL9 99 aa10.46□□□□□ -0.73
HIF1A-206ENST00000553999 LYRM7Q5U5X0 104 aa10.44□□□□□ -0.74
HIF1A-206ENST00000553999 LOC110117498A0A087WWA1 95 aa10.43□□□□□ -0.74
HIF1A-206ENST00000553999 J3KT08 172 aa10.43□□□□□ -0.74
HIF1A-206ENST00000553999 LOC105371267A0A1B0GV96 52 aa10.41□□□□□ -0.74
HIF1A-206ENST00000553999 FSIP2Q5CZC0 6907 aa10.41□□□□□ -0.74
HIF1A-206ENST00000553999 NDUFB1O75438 58 aa10.4□□□□□ -0.74
HIF1A-206ENST00000553999 HRES1P13985 223 aa10.4□□□□□ -0.74
HIF1A-206ENST00000553999 C21orf62-AS1Q17RA5 79 aa10.4□□□□□ -0.74
HIF1A-206ENST00000553999 ZCCHC13Q8WW36 166 aaKnown RBP10.37□□□□□ -0.75
HIF1A-206ENST00000553999 C8orf17Q9NRJ1 99 aa10.37□□□□□ -0.75
HIF1A-206ENST00000553999 IGKV3D-7A0A0C4DH55 119 aa10.36□□□□□ -0.75
HIF1A-206ENST00000553999 A8MWP4 228 aa10.36□□□□□ -0.75
HIF1A-206ENST00000553999 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
HIF1A-206ENST00000553999 C9orf118A6NHY6 69 aa10.35□□□□□ -0.75
HIF1A-206ENST00000553999 PDE6GP18545 87 aa10.35□□□□□ -0.75
HIF1A-206ENST00000553999 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
HIF1A-206ENST00000553999 A0A1W2PPM0 123 aa10.32□□□□□ -0.76
HIF1A-206ENST00000553999 NREPQ16612 68 aa10.32□□□□□ -0.76
HIF1A-206ENST00000553999 MPLKIPQ8TAP9 179 aa10.3□□□□□ -0.76
HIF1A-206ENST00000553999 SPINK7P58062 85 aa10.28□□□□□ -0.76
HIF1A-206ENST00000553999 A0A1B0GW54 56 aa10.27□□□□□ -0.77
HIF1A-206ENST00000553999 H3BT86 120 aa10.27□□□□□ -0.77
HIF1A-206ENST00000553999 Q6ZVQ6 151 aa10.27□□□□□ -0.77
HIF1A-206ENST00000553999 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
HIF1A-206ENST00000553999 KRTAP9-8Q9BYQ0 159 aa10.27□□□□□ -0.77
HIF1A-206ENST00000553999 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
HIF1A-206ENST00000553999 K7EQZ3 153 aa10.23□□□□□ -0.77
HIF1A-206ENST00000553999 MMP24-AS1A0A0U1RRL7 71 aa10.22□□□□□ -0.77
HIF1A-206ENST00000553999 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
HIF1A-206ENST00000553999 WFDC13Q8IUB5 93 aa10.2□□□□□ -0.78
HIF1A-206ENST00000553999 NDUFS5O43920 106 aa10.19□□□□□ -0.78
HIF1A-206ENST00000553999 MT2AP02795 61 aa10.18□□□□□ -0.78
HIF1A-206ENST00000553999 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
HIF1A-206ENST00000553999 TMEM254Q8TBM7 123 aa10.16□□□□□ -0.78
HIF1A-206ENST00000553999 BPY2O14599 106 aa10.15□□□□□ -0.78
HIF1A-206ENST00000553999 Q8N9L7 120 aa10.15□□□□□ -0.78
HIF1A-206ENST00000553999 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
HIF1A-206ENST00000553999 SMCPP49901 116 aaPredicted RBP10.13□□□□□ -0.79
HIF1A-206ENST00000553999 MT1FP04733 61 aa10.12□□□□□ -0.79
HIF1A-206ENST00000553999 KRTAP10-10P60014 251 aa10.08□□□□□ -0.8
HIF1A-206ENST00000553999 COL5A1-AS1Q5SY13 56 aa10.06□□□□□ -0.8
HIF1A-206ENST00000553999 IGKV2D-30A0A075B6S6 120 aa10.04□□□□□ -0.8
HIF1A-206ENST00000553999 IGKV2-30P06310 120 aa10.04□□□□□ -0.8
HIF1A-206ENST00000553999 K7EP34 96 aa10.01□□□□□ -0.81
HIF1A-206ENST00000553999 CASC2Q6XLA1 102 aa10.01□□□□□ -0.81
HIF1A-206ENST00000553999 PRO0461Q9UI25 63 aa10.01□□□□□ -0.81
HIF1A-206ENST00000553999 Q5W150 140 aa10□□□□□ -0.81
HIF1A-206ENST00000553999 HCG22E2RYF7 251 aa9.99□□□□□ -0.81
HIF1A-206ENST00000553999 LINC00846Q9NV44 126 aa9.98□□□□□ -0.81
HIF1A-206ENST00000553999 PCP4L1A6NKN8 68 aa9.97□□□□□ -0.81
HIF1A-206ENST00000553999 LCE2BO14633 110 aa9.95□□□□□ -0.82
HIF1A-206ENST00000553999 KRTAP9-3Q9BYQ3 159 aa9.94□□□□□ -0.82
HIF1A-206ENST00000553999 UBL5Q9BZL1 73 aa9.94□□□□□ -0.82
HIF1A-206ENST00000553999 USH2AO75445 5202 aa9.94□□□□□ -0.82
HIF1A-206ENST00000553999 C7orf65Q6ZTY9 151 aa9.92□□□□□ -0.82
HIF1A-206ENST00000553999 H1FX-AS1Q4G0G2 97 aa9.89□□□□□ -0.83
HIF1A-206ENST00000553999 GTF2H5Q6ZYL4 71 aa9.85□□□□□ -0.83
HIF1A-206ENST00000553999 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
HIF1A-206ENST00000553999 SSPOA2VEC9 5147 aa9.83□□□□□ -0.84
HIF1A-206ENST00000553999 CXCL6P80162 114 aa9.82□□□□□ -0.84
HIF1A-206ENST00000553999 ETDBQ3ZM63 59 aa9.81□□□□□ -0.84
HIF1A-206ENST00000553999 KRTAP19-1Q8IUB9 90 aa9.8□□□□□ -0.84
HIF1A-206ENST00000553999 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-206ENST00000553999 F8W1H4 67 aa9.75□□□□□ -0.85
HIF1A-206ENST00000553999 C5orf47Q569G3 176 aa9.68□□□□□ -0.86
HIF1A-206ENST00000553999 FCGBPQ9Y6R7 5405 aaPredicted RBP9.64□□□□□ -0.87
HIF1A-206ENST00000553999 KRTAP9-7A8MTY7 169 aa9.63□□□□□ -0.87
HIF1A-206ENST00000553999 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
HIF1A-206ENST00000553999 C1orf64Q8NEQ6 169 aa9.62□□□□□ -0.87
HIF1A-206ENST00000553999 TP53AIP1Q9HCN2 124 aa9.6□□□□□ -0.87
HIF1A-206ENST00000553999 S4R3F8 94 aa9.6□□□□□ -0.87
HIF1A-206ENST00000553999 FAM236AA0A1B0GUQ0 79 aa9.56□□□□□ -0.88
HIF1A-206ENST00000553999 FAM236BA0A1B0GV22 79 aa9.56□□□□□ -0.88
HIF1A-206ENST00000553999 LCA10Q71F78 164 aa9.53□□□□□ -0.88
HIF1A-206ENST00000553999 HIST1H4AP62805 103 aaKnown RBP9.52□□□□□ -0.89
HIF1A-206ENST00000553999 KRTAP19-6Q3LI70 58 aa9.52□□□□□ -0.89
HIF1A-206ENST00000553999 TRAV22A0A0B4J277 110 aa9.47□□□□□ -0.89
HIF1A-206ENST00000553999 ACYP1P07311 99 aa9.47□□□□□ -0.89
HIF1A-206ENST00000553999 CYP4F30PQ9H0H9 118 aa9.47□□□□□ -0.89
HIF1A-206ENST00000553999 CSAG1Q6PB30 78 aa9.46□□□□□ -0.9
HIF1A-206ENST00000553999 A0A087WVE0 104 aa9.42□□□□□ -0.9
HIF1A-206ENST00000553999 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
HIF1A-206ENST00000553999 ATP5EP2Q5VTU8 51 aa9.42□□□□□ -0.9
HIF1A-206ENST00000553999 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
HIF1A-206ENST00000553999 H0Y9P7 68 aa9.38□□□□□ -0.91
HIF1A-206ENST00000553999 A0A1B0GV90 55 aa9.37□□□□□ -0.91
HIF1A-206ENST00000553999 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
HIF1A-206ENST00000553999 UQCRQO14949 82 aa9.34□□□□□ -0.91
HIF1A-206ENST00000553999 MACF1Q9UPN3 7388 aaKnown RBP9.33□□□□□ -0.92
HIF1A-206ENST00000553999 LINC00643Q86TS7 51 aa9.28□□□□□ -0.92
HIF1A-206ENST00000553999 MT1BP07438 61 aa9.26□□□□□ -0.93
HIF1A-206ENST00000553999 ATOX1O00244 68 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms