RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ETDBQ3ZM63 59 aa7.49□□□□□ -1.21
TUBB3-202ENST00000553656 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
TUBB3-202ENST00000553656 A0A1B0GVX0 72 aa7.47□□□□□ -1.21
TUBB3-202ENST00000553656 C8orf87E5RJ46 101 aa7.47□□□□□ -1.21
TUBB3-202ENST00000553656 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
TUBB3-202ENST00000553656 RNF213Q63HN8 5207 aa7.46□□□□□ -1.22
TUBB3-202ENST00000553656 A8MWP4 228 aa7.45□□□□□ -1.22
TUBB3-202ENST00000553656 Q75L30 129 aa7.45□□□□□ -1.22
TUBB3-202ENST00000553656 BPY2O14599 106 aa7.43□□□□□ -1.22
TUBB3-202ENST00000553656 ATP11AUNQ6ZP68 121 aa7.43□□□□□ -1.22
TUBB3-202ENST00000553656 Q6ZVQ6 151 aa7.43□□□□□ -1.22
TUBB3-202ENST00000553656 UBL5Q9BZL1 73 aa7.43□□□□□ -1.22
TUBB3-202ENST00000553656 C20orf166-AS1Q96NR2 134 aa7.42□□□□□ -1.22
TUBB3-202ENST00000553656 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
TUBB3-202ENST00000553656 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.22
TUBB3-202ENST00000553656 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
TUBB3-202ENST00000553656 LINC00846Q9NV44 126 aa7.4□□□□□ -1.22
TUBB3-202ENST00000553656 A8MUU9 505 aa7.39□□□□□ -1.23
TUBB3-202ENST00000553656 PRR15Q8IV56 129 aa7.39□□□□□ -1.23
TUBB3-202ENST00000553656 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
TUBB3-202ENST00000553656 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
TUBB3-202ENST00000553656 K7EQZ3 153 aa7.35□□□□□ -1.23
TUBB3-202ENST00000553656 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
TUBB3-202ENST00000553656 ACYP1P07311 99 aa7.33□□□□□ -1.24
TUBB3-202ENST00000553656 MUC2Q02817 5179 aa7.33□□□□□ -1.24
TUBB3-202ENST00000553656 K7ERU9 68 aa7.32□□□□□ -1.24
TUBB3-202ENST00000553656 J3QR89 54 aa7.31□□□□□ -1.24
TUBB3-202ENST00000553656 MMP24-AS1A0A0U1RRL7 71 aa7.3□□□□□ -1.24
TUBB3-202ENST00000553656 FAM240AA0A1B0GVK7 77 aa7.3□□□□□ -1.24
TUBB3-202ENST00000553656 Q8N9L7 120 aa7.3□□□□□ -1.24
TUBB3-202ENST00000553656 hDV103S1A0JD37 113 aa7.29□□□□□ -1.24
TUBB3-202ENST00000553656 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
TUBB3-202ENST00000553656 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
TUBB3-202ENST00000553656 CXCL6P80162 114 aa7.27□□□□□ -1.25
TUBB3-202ENST00000553656 Q8N9P0 234 aaPredicted RBP7.27□□□□□ -1.25
TUBB3-202ENST00000553656 NDUFS5O43920 106 aa7.25□□□□□ -1.25
TUBB3-202ENST00000553656 CASC2Q6XLA1 102 aa7.25□□□□□ -1.25
TUBB3-202ENST00000553656 WFDC13Q8IUB5 93 aa7.25□□□□□ -1.25
TUBB3-202ENST00000553656 ZCCHC13Q8WW36 166 aaKnown RBP7.24□□□□□ -1.25
TUBB3-202ENST00000553656 HCG22E2RYF7 251 aa7.22□□□□□ -1.25
TUBB3-202ENST00000553656 ATP5EP2Q5VTU8 51 aa7.22□□□□□ -1.25
TUBB3-202ENST00000553656 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
TUBB3-202ENST00000553656 LINC00643Q86TS7 51 aa7.17□□□□□ -1.26
TUBB3-202ENST00000553656 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.26
TUBB3-202ENST00000553656 HIST1H4AP62805 103 aaKnown RBP7.14□□□□□ -1.27
TUBB3-202ENST00000553656 SPINK7P58062 85 aa7.12□□□□□ -1.27
TUBB3-202ENST00000553656 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
TUBB3-202ENST00000553656 RBM12B-AS1Q9P1G2 102 aa7.1□□□□□ -1.27
TUBB3-202ENST00000553656 FAM236DA0A1B0GTK5 79 aa7.08□□□□□ -1.28
TUBB3-202ENST00000553656 FAM236CP0DP71 79 aa7.08□□□□□ -1.28
TUBB3-202ENST00000553656 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
TUBB3-202ENST00000553656 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
TUBB3-202ENST00000553656 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
TUBB3-202ENST00000553656 HRES1P13985 223 aa7.06□□□□□ -1.28
TUBB3-202ENST00000553656 Q5W150 140 aa7.06□□□□□ -1.28
TUBB3-202ENST00000553656 IGKV2D-30A0A075B6S6 120 aa7.04□□□□□ -1.28
TUBB3-202ENST00000553656 MT-ATP8P03928 68 aa7.04□□□□□ -1.28
TUBB3-202ENST00000553656 IGKV2-30P06310 120 aa7.04□□□□□ -1.28
TUBB3-202ENST00000553656 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
TUBB3-202ENST00000553656 A0A087WVE0 104 aa7.02□□□□□ -1.29
TUBB3-202ENST00000553656 MT1HP80294 61 aa7.02□□□□□ -1.29
TUBB3-202ENST00000553656 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
TUBB3-202ENST00000553656 M0R2T5 61 aa7□□□□□ -1.29
TUBB3-202ENST00000553656 TRAV22A0A0B4J277 110 aa6.95□□□□□ -1.3
TUBB3-202ENST00000553656 UQCRQO14949 82 aa6.95□□□□□ -1.3
TUBB3-202ENST00000553656 IMUPQ9GZP8 106 aa6.92□□□□□ -1.3
TUBB3-202ENST00000553656 ATOX1O00244 68 aa6.9□□□□□ -1.3
TUBB3-202ENST00000553656 SCGB1A1P11684 91 aa6.9□□□□□ -1.3
TUBB3-202ENST00000553656 H0Y9P7 68 aa6.89□□□□□ -1.31
TUBB3-202ENST00000553656 LOC101927531A0A1B0GV80 90 aa6.88□□□□□ -1.31
TUBB3-202ENST00000553656 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
TUBB3-202ENST00000553656 FLGP20930 4061 aaPredicted RBP6.85□□□□□ -1.31
TUBB3-202ENST00000553656 MP68P56378 58 aa6.85□□□□□ -1.31
TUBB3-202ENST00000553656 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
TUBB3-202ENST00000553656 CYP4F30PQ9H0H9 118 aa6.85□□□□□ -1.31
TUBB3-202ENST00000553656 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
TUBB3-202ENST00000553656 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
TUBB3-202ENST00000553656 FAM236AA0A1B0GUQ0 79 aa6.83□□□□□ -1.32
TUBB3-202ENST00000553656 FAM236BA0A1B0GV22 79 aa6.83□□□□□ -1.32
TUBB3-202ENST00000553656 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
TUBB3-202ENST00000553656 C5orf47Q569G3 176 aa6.81□□□□□ -1.32
TUBB3-202ENST00000553656 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
TUBB3-202ENST00000553656 LINC00208Q96KT6 92 aa6.8□□□□□ -1.32
TUBB3-202ENST00000553656 H3BPC8 53 aa6.76□□□□□ -1.33
TUBB3-202ENST00000553656 SMIM20Q8N5G0 67 aa6.76□□□□□ -1.33
TUBB3-202ENST00000553656 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
TUBB3-202ENST00000553656 PCP4P48539 62 aa6.73□□□□□ -1.33
TUBB3-202ENST00000553656 TRAV7A0A075B6U4 112 aa6.72□□□□□ -1.33
TUBB3-202ENST00000553656 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
TUBB3-202ENST00000553656 S4R3F8 94 aa6.69□□□□□ -1.34
TUBB3-202ENST00000553656 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
TUBB3-202ENST00000553656 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
TUBB3-202ENST00000553656 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
TUBB3-202ENST00000553656 SERP2Q8N6R1 65 aa6.65□□□□□ -1.34
TUBB3-202ENST00000553656 A8MUN3 132 aa6.64□□□□□ -1.35
TUBB3-202ENST00000553656 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
TUBB3-202ENST00000553656 MT2AP02795 61 aa6.62□□□□□ -1.35
TUBB3-202ENST00000553656 COX7CP15954 63 aa6.62□□□□□ -1.35
TUBB3-202ENST00000553656 LCA10Q71F78 164 aa6.61□□□□□ -1.35
TUBB3-202ENST00000553656 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms