RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
VPS29-211ENST00000553128 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
VPS29-211ENST00000553128 ANKRD29Q8N6D5 301 aa5.79□□□□□ -1.48
VPS29-211ENST00000553128 SPRR2EP22531 72 aa5.78□□□□□ -1.48
VPS29-211ENST00000553128 SPRR2BP35325 72 aa5.78□□□□□ -1.48
VPS29-211ENST00000553128 SPRR2AP35326 72 aa5.78□□□□□ -1.48
VPS29-211ENST00000553128 KRTAP2-2Q9BYT5 123 aa5.78□□□□□ -1.48
VPS29-211ENST00000553128 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
VPS29-211ENST00000553128 H0YGX0 51 aa5.76□□□□□ -1.49
VPS29-211ENST00000553128 SNCGO76070 127 aa5.75□□□□□ -1.49
VPS29-211ENST00000553128 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
VPS29-211ENST00000553128 TRACP01848 142 aa5.74□□□□□ -1.49
VPS29-211ENST00000553128 CCKP06307 115 aa5.74□□□□□ -1.49
VPS29-211ENST00000553128 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
VPS29-211ENST00000553128 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
VPS29-211ENST00000553128 C21orf62-AS1Q17RA5 79 aa5.73□□□□□ -1.49
VPS29-211ENST00000553128 LYRM7Q5U5X0 104 aa5.73□□□□□ -1.49
VPS29-211ENST00000553128 HIST1H4GQ99525 98 aa5.73□□□□□ -1.49
VPS29-211ENST00000553128 COA6Q5JTJ3 125 aaKnown RBP5.72□□□□□ -1.49
VPS29-211ENST00000553128 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
VPS29-211ENST00000553128 FAM236AA0A1B0GUQ0 79 aa5.71□□□□□ -1.5
VPS29-211ENST00000553128 FAM236BA0A1B0GV22 79 aa5.71□□□□□ -1.5
VPS29-211ENST00000553128 SNRPEP62304 92 aaKnown RBP5.71□□□□□ -1.5
VPS29-211ENST00000553128 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
VPS29-211ENST00000553128 A0A1B0GX51 115 aa5.69□□□□□ -1.5
VPS29-211ENST00000553128 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
VPS29-211ENST00000553128 VPS25Q9BRG1 176 aa5.66□□□□□ -1.5
VPS29-211ENST00000553128 C8orf17Q9NRJ1 99 aa5.66□□□□□ -1.5
VPS29-211ENST00000553128 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.5
VPS29-211ENST00000553128 A0A0B4J2C4 111 aa5.64□□□□□ -1.51
VPS29-211ENST00000553128 DSCR8Q96T75 97 aa5.64□□□□□ -1.51
VPS29-211ENST00000553128 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
VPS29-211ENST00000553128 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
VPS29-211ENST00000553128 J3KT08 172 aa5.63□□□□□ -1.51
VPS29-211ENST00000553128 ORMDL1Q9P0S3 153 aa5.63□□□□□ -1.51
VPS29-211ENST00000553128 HSBP1L1C9JCN9 74 aa5.62□□□□□ -1.51
VPS29-211ENST00000553128 TRIAP1O43715 76 aa5.62□□□□□ -1.51
VPS29-211ENST00000553128 IMUPQ9GZP8 106 aa5.62□□□□□ -1.51
VPS29-211ENST00000553128 Q6ZVQ6 151 aa5.61□□□□□ -1.51
VPS29-211ENST00000553128 NDUFB1O75438 58 aa5.6□□□□□ -1.51
VPS29-211ENST00000553128 SPRR2DP22532 72 aa5.6□□□□□ -1.51
VPS29-211ENST00000553128 TMEM256-PLSCR3K7ERE1 68 aa5.59□□□□□ -1.51
VPS29-211ENST00000553128 DNAL4O96015 105 aa5.59□□□□□ -1.51
VPS29-211ENST00000553128 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
VPS29-211ENST00000553128 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
VPS29-211ENST00000553128 COX8AP10176 69 aa5.57□□□□□ -1.52
VPS29-211ENST00000553128 RBM3P98179 157 aaKnown RBP5.57□□□□□ -1.52
VPS29-211ENST00000553128 C4orf26Q17RF5 130 aa5.56□□□□□ -1.52
VPS29-211ENST00000553128 Q6ZQT0 140 aa5.56□□□□□ -1.52
VPS29-211ENST00000553128 PRO1854Q9UHT4 67 aa5.56□□□□□ -1.52
VPS29-211ENST00000553128 H3BQ85 93 aa5.54□□□□□ -1.52
VPS29-211ENST00000553128 UBE2V1Q13404 147 aa5.54□□□□□ -1.52
VPS29-211ENST00000553128 C2orf91Q6ZV80 131 aa5.54□□□□□ -1.52
VPS29-211ENST00000553128 HIST1H2BLQ99880 126 aa5.54□□□□□ -1.52
VPS29-211ENST00000553128 DLEU1O43261 78 aa5.53□□□□□ -1.52
VPS29-211ENST00000553128 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
VPS29-211ENST00000553128 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
VPS29-211ENST00000553128 CEND1Q8N111 149 aa5.53□□□□□ -1.52
VPS29-211ENST00000553128 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
VPS29-211ENST00000553128 MMP24-AS1A0A0U1RRL7 71 aa5.52□□□□□ -1.53
VPS29-211ENST00000553128 Q5W150 140 aa5.52□□□□□ -1.53
VPS29-211ENST00000553128 MRPL34Q9BQ48 92 aaKnown RBP5.52□□□□□ -1.53
VPS29-211ENST00000553128 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
VPS29-211ENST00000553128 HIST3H2BBQ8N257 126 aa5.51□□□□□ -1.53
VPS29-211ENST00000553128 C14orf144Q96I85 54 aa5.51□□□□□ -1.53
VPS29-211ENST00000553128 PRR15Q8IV56 129 aa5.5□□□□□ -1.53
VPS29-211ENST00000553128 TMEM254Q8TBM7 123 aa5.5□□□□□ -1.53
VPS29-211ENST00000553128 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
VPS29-211ENST00000553128 HIGD1BQ9P298 99 aa5.5□□□□□ -1.53
VPS29-211ENST00000553128 FXYD2P54710 66 aa5.49□□□□□ -1.53
VPS29-211ENST00000553128 CSAG1Q6PB30 78 aa5.49□□□□□ -1.53
VPS29-211ENST00000553128 S4R3F8 94 aa5.49□□□□□ -1.53
VPS29-211ENST00000553128 NDUFS5O43920 106 aa5.48□□□□□ -1.53
VPS29-211ENST00000553128 LCA10Q71F78 164 aa5.48□□□□□ -1.53
VPS29-211ENST00000553128 C9JAW5 83 aa5.46□□□□□ -1.54
VPS29-211ENST00000553128 PSMB2P49721 201 aa5.46□□□□□ -1.54
VPS29-211ENST00000553128 K7ERJ3 54 aa5.45□□□□□ -1.54
VPS29-211ENST00000553128 S100A2P29034 98 aa5.45□□□□□ -1.54
VPS29-211ENST00000553128 MT1XP80297 61 aa5.44□□□□□ -1.54
VPS29-211ENST00000553128 hDV103S1A0JD37 113 aa5.43□□□□□ -1.54
VPS29-211ENST00000553128 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
VPS29-211ENST00000553128 PAM16Q9Y3D7 125 aa5.4□□□□□ -1.54
VPS29-211ENST00000553128 K7EQZ3 153 aa5.39□□□□□ -1.55
VPS29-211ENST00000553128 COX6CP09669 75 aa5.39□□□□□ -1.55
VPS29-211ENST00000553128 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
VPS29-211ENST00000553128 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
VPS29-211ENST00000553128 SPATA45Q537H7 98 aa5.38□□□□□ -1.55
VPS29-211ENST00000553128 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
VPS29-211ENST00000553128 BAALC-AS2P0C853 105 aa5.37□□□□□ -1.55
VPS29-211ENST00000553128 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
VPS29-211ENST00000553128 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
VPS29-211ENST00000553128 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
VPS29-211ENST00000553128 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
VPS29-211ENST00000553128 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
VPS29-211ENST00000553128 NREPQ16612 68 aa5.33□□□□□ -1.56
VPS29-211ENST00000553128 A0A1B0GW54 56 aa5.32□□□□□ -1.56
VPS29-211ENST00000553128 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
VPS29-211ENST00000553128 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
VPS29-211ENST00000553128 HCG22E2RYF7 251 aa5.3□□□□□ -1.56
VPS29-211ENST00000553128 SCGB1C2P0DMR2 95 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms