RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 NOTCH2NLQ7Z3S9 236 aa10.11□□□□□ -0.79
CTDSP2-207ENST00000551594 LINC00313P59037 77 aa10.09□□□□□ -0.79
CTDSP2-207ENST00000551594 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
CTDSP2-207ENST00000551594 PCOTHQ58A44 107 aa10.09□□□□□ -0.79
CTDSP2-207ENST00000551594 MUC2Q02817 5179 aa10.09□□□□□ -0.79
CTDSP2-207ENST00000551594 A0A1B0GVX0 72 aa10.08□□□□□ -0.8
CTDSP2-207ENST00000551594 KRTAP4-1Q9BYQ7 146 aa10.06□□□□□ -0.8
CTDSP2-207ENST00000551594 Q6ZVQ6 151 aa10.04□□□□□ -0.8
CTDSP2-207ENST00000551594 LINC00846Q9NV44 126 aa10.04□□□□□ -0.8
CTDSP2-207ENST00000551594 KRTAP16-1A8MUX0 517 aa10.03□□□□□ -0.8
CTDSP2-207ENST00000551594 A8MWP4 228 aa10.03□□□□□ -0.8
CTDSP2-207ENST00000551594 Q75L30 129 aa10.03□□□□□ -0.8
CTDSP2-207ENST00000551594 IGKV3D-7A0A0C4DH55 119 aa10.02□□□□□ -0.81
CTDSP2-207ENST00000551594 NDUFB1O75438 58 aa10.02□□□□□ -0.81
CTDSP2-207ENST00000551594 A8MUU9 505 aa10.01□□□□□ -0.81
CTDSP2-207ENST00000551594 C20orf166-AS1Q96NR2 134 aa10.01□□□□□ -0.81
CTDSP2-207ENST00000551594 C8orf87E5RJ46 101 aa10□□□□□ -0.81
CTDSP2-207ENST00000551594 BPY2O14599 106 aa9.98□□□□□ -0.81
CTDSP2-207ENST00000551594 PRR15Q8IV56 129 aa9.97□□□□□ -0.81
CTDSP2-207ENST00000551594 UBL5Q9BZL1 73 aa9.96□□□□□ -0.82
CTDSP2-207ENST00000551594 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
CTDSP2-207ENST00000551594 K7EQZ3 153 aa9.95□□□□□ -0.82
CTDSP2-207ENST00000551594 ATP11AUNQ6ZP68 121 aa9.95□□□□□ -0.82
CTDSP2-207ENST00000551594 Q8N9L7 120 aa9.92□□□□□ -0.82
CTDSP2-207ENST00000551594 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
CTDSP2-207ENST00000551594 ACYP1P07311 99 aa9.84□□□□□ -0.83
CTDSP2-207ENST00000551594 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
CTDSP2-207ENST00000551594 FAM240AA0A1B0GVK7 77 aa9.82□□□□□ -0.84
CTDSP2-207ENST00000551594 TMEM254Q8TBM7 123 aa9.82□□□□□ -0.84
CTDSP2-207ENST00000551594 hDV103S1A0JD37 113 aa9.81□□□□□ -0.84
CTDSP2-207ENST00000551594 FAT4Q6V0I7 4981 aa9.81□□□□□ -0.84
CTDSP2-207ENST00000551594 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
CTDSP2-207ENST00000551594 WFDC13Q8IUB5 93 aa9.8□□□□□ -0.84
CTDSP2-207ENST00000551594 MRPL34Q9BQ48 92 aaKnown RBP9.8□□□□□ -0.84
CTDSP2-207ENST00000551594 CXCL6P80162 114 aa9.77□□□□□ -0.85
CTDSP2-207ENST00000551594 ZCCHC13Q8WW36 166 aaKnown RBP9.76□□□□□ -0.85
CTDSP2-207ENST00000551594 CASC2Q6XLA1 102 aa9.75□□□□□ -0.85
CTDSP2-207ENST00000551594 NDUFS5O43920 106 aa9.73□□□□□ -0.85
CTDSP2-207ENST00000551594 KRTAP19-2Q3LHN2 52 aa9.72□□□□□ -0.85
CTDSP2-207ENST00000551594 HCG22E2RYF7 251 aa9.71□□□□□ -0.86
CTDSP2-207ENST00000551594 LCE2CQ5TA81 110 aa9.68□□□□□ -0.86
CTDSP2-207ENST00000551594 J3QR89 54 aa9.66□□□□□ -0.86
CTDSP2-207ENST00000551594 ATP5EP2Q5VTU8 51 aa9.65□□□□□ -0.86
CTDSP2-207ENST00000551594 LINC00643Q86TS7 51 aa9.65□□□□□ -0.86
CTDSP2-207ENST00000551594 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
CTDSP2-207ENST00000551594 Q5W150 140 aa9.61□□□□□ -0.87
CTDSP2-207ENST00000551594 SPINK7P58062 85 aa9.6□□□□□ -0.87
CTDSP2-207ENST00000551594 HIST1H4AP62805 103 aaKnown RBP9.6□□□□□ -0.87
CTDSP2-207ENST00000551594 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
CTDSP2-207ENST00000551594 HRES1P13985 223 aa9.59□□□□□ -0.87
CTDSP2-207ENST00000551594 FLGP20930 4061 aaPredicted RBP9.56□□□□□ -0.88
CTDSP2-207ENST00000551594 A0A087WVE0 104 aa9.54□□□□□ -0.88
CTDSP2-207ENST00000551594 MT1HP80294 61 aa9.52□□□□□ -0.89
CTDSP2-207ENST00000551594 MPLKIPQ8TAP9 179 aa9.52□□□□□ -0.89
CTDSP2-207ENST00000551594 K7ERU9 68 aa9.5□□□□□ -0.89
CTDSP2-207ENST00000551594 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
CTDSP2-207ENST00000551594 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
CTDSP2-207ENST00000551594 TP53AIP1Q9HCN2 124 aa9.48□□□□□ -0.89
CTDSP2-207ENST00000551594 RBM12B-AS1Q9P1G2 102 aa9.47□□□□□ -0.89
CTDSP2-207ENST00000551594 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.9
CTDSP2-207ENST00000551594 FAM236CP0DP71 79 aa9.46□□□□□ -0.9
CTDSP2-207ENST00000551594 C7orf65Q6ZTY9 151 aa9.43□□□□□ -0.9
CTDSP2-207ENST00000551594 MT-ATP8P03928 68 aa9.39□□□□□ -0.91
CTDSP2-207ENST00000551594 M0R2T5 61 aa9.37□□□□□ -0.91
CTDSP2-207ENST00000551594 UQCRQO14949 82 aa9.34□□□□□ -0.91
CTDSP2-207ENST00000551594 TRAV22A0A0B4J277 110 aa9.33□□□□□ -0.92
CTDSP2-207ENST00000551594 C4orf26Q17RF5 130 aa9.29□□□□□ -0.92
CTDSP2-207ENST00000551594 OCR1Q9BZK8 76 aa9.29□□□□□ -0.92
CTDSP2-207ENST00000551594 H0Y9P7 68 aa9.28□□□□□ -0.92
CTDSP2-207ENST00000551594 KRTAP10-6P60371 365 aaPredicted RBP9.28□□□□□ -0.92
CTDSP2-207ENST00000551594 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
CTDSP2-207ENST00000551594 CYP4F30PQ9H0H9 118 aa9.26□□□□□ -0.93
CTDSP2-207ENST00000551594 SCGB1A1P11684 91 aa9.24□□□□□ -0.93
CTDSP2-207ENST00000551594 LORP23490 312 aaPredicted RBP9.24□□□□□ -0.93
CTDSP2-207ENST00000551594 LOC101927531A0A1B0GV80 90 aa9.23□□□□□ -0.93
CTDSP2-207ENST00000551594 ATOX1O00244 68 aa9.21□□□□□ -0.94
CTDSP2-207ENST00000551594 H1FX-AS1Q4G0G2 97 aa9.21□□□□□ -0.94
CTDSP2-207ENST00000551594 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
CTDSP2-207ENST00000551594 LINC00208Q96KT6 92 aa9.18□□□□□ -0.94
CTDSP2-207ENST00000551594 KRTAP3-1Q9BYR8 98 aa9.18□□□□□ -0.94
CTDSP2-207ENST00000551594 FAM236AA0A1B0GUQ0 79 aa9.17□□□□□ -0.94
CTDSP2-207ENST00000551594 FAM236BA0A1B0GV22 79 aa9.17□□□□□ -0.94
CTDSP2-207ENST00000551594 MP68P56378 58 aa9.15□□□□□ -0.94
CTDSP2-207ENST00000551594 C5orf47Q569G3 176 aa9.15□□□□□ -0.94
CTDSP2-207ENST00000551594 KLKP1Q107X0 134 aa9.09□□□□□ -0.95
CTDSP2-207ENST00000551594 KRTAP9-8Q9BYQ0 159 aa9.08□□□□□ -0.96
CTDSP2-207ENST00000551594 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
CTDSP2-207ENST00000551594 H3BPC8 53 aa9.04□□□□□ -0.96
CTDSP2-207ENST00000551594 SMIM20Q8N5G0 67 aa9.04□□□□□ -0.96
CTDSP2-207ENST00000551594 KRTAP9-2Q9BYQ4 174 aa9.02□□□□□ -0.97
CTDSP2-207ENST00000551594 MT2AP02795 61 aa9□□□□□ -0.97
CTDSP2-207ENST00000551594 S4R3F8 94 aa8.99□□□□□ -0.97
CTDSP2-207ENST00000551594 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
CTDSP2-207ENST00000551594 LCA10Q71F78 164 aa8.95□□□□□ -0.98
CTDSP2-207ENST00000551594 MT1FP04733 61 aa8.93□□□□□ -0.98
CTDSP2-207ENST00000551594 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
CTDSP2-207ENST00000551594 SERP2Q8N6R1 65 aa8.89□□□□□ -0.99
CTDSP2-207ENST00000551594 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
CTDSP2-207ENST00000551594 SNURFQ9Y675 71 aa8.88□□□□□ -0.99
CTDSP2-207ENST00000551594 A8MUN3 132 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms