RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
CHMP1A-209ENST00000550872 IGHV6-1A0A0B4J1U7 121 aa8.72□□□□□ -1.01
CHMP1A-209ENST00000550872 MUC17Q685J3 4493 aa8.72□□□□□ -1.01
CHMP1A-209ENST00000550872 A0A1B0GVX0 72 aa8.69□□□□□ -1.02
CHMP1A-209ENST00000550872 NDUFB1O75438 58 aa8.69□□□□□ -1.02
CHMP1A-209ENST00000550872 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
CHMP1A-209ENST00000550872 Q75L30 129 aa8.68□□□□□ -1.02
CHMP1A-209ENST00000550872 NOTCH2NLQ7Z3S9 236 aa8.68□□□□□ -1.02
CHMP1A-209ENST00000550872 KRTAP9-2Q9BYQ4 174 aa8.67□□□□□ -1.02
CHMP1A-209ENST00000550872 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
CHMP1A-209ENST00000550872 C8orf87E5RJ46 101 aa8.66□□□□□ -1.02
CHMP1A-209ENST00000550872 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
CHMP1A-209ENST00000550872 A8MWP4 228 aa8.65□□□□□ -1.02
CHMP1A-209ENST00000550872 C20orf166-AS1Q96NR2 134 aa8.65□□□□□ -1.02
CHMP1A-209ENST00000550872 A0A1B0GV90 55 aa8.64□□□□□ -1.03
CHMP1A-209ENST00000550872 A8MUU9 505 aa8.64□□□□□ -1.03
CHMP1A-209ENST00000550872 ATP11AUNQ6ZP68 121 aa8.64□□□□□ -1.03
CHMP1A-209ENST00000550872 KRTAP16-1A8MUX0 517 aa8.63□□□□□ -1.03
CHMP1A-209ENST00000550872 IGKV3D-7A0A0C4DH55 119 aa8.62□□□□□ -1.03
CHMP1A-209ENST00000550872 Q6ZVQ6 151 aa8.62□□□□□ -1.03
CHMP1A-209ENST00000550872 BPY2O14599 106 aa8.6□□□□□ -1.03
CHMP1A-209ENST00000550872 LINC00846Q9NV44 126 aa8.6□□□□□ -1.03
CHMP1A-209ENST00000550872 PRR15Q8IV56 129 aa8.59□□□□□ -1.03
CHMP1A-209ENST00000550872 UBL5Q9BZL1 73 aa8.59□□□□□ -1.03
CHMP1A-209ENST00000550872 C8orf17Q9NRJ1 99 aa8.59□□□□□ -1.03
CHMP1A-209ENST00000550872 FAT4Q6V0I7 4981 aa8.56□□□□□ -1.04
CHMP1A-209ENST00000550872 K7EQZ3 153 aa8.55□□□□□ -1.04
CHMP1A-209ENST00000550872 MMP24-AS1A0A0U1RRL7 71 aa8.5□□□□□ -1.05
CHMP1A-209ENST00000550872 Q8N9L7 120 aa8.49□□□□□ -1.05
CHMP1A-209ENST00000550872 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
CHMP1A-209ENST00000550872 hDV103S1A0JD37 113 aa8.47□□□□□ -1.05
CHMP1A-209ENST00000550872 ACYP1P07311 99 aa8.47□□□□□ -1.05
CHMP1A-209ENST00000550872 TMEM254Q8TBM7 123 aa8.47□□□□□ -1.05
CHMP1A-209ENST00000550872 KRTAP9-6A0A140TA67 174 aa8.46□□□□□ -1.06
CHMP1A-209ENST00000550872 MRPL34Q9BQ48 92 aaKnown RBP8.46□□□□□ -1.06
CHMP1A-209ENST00000550872 FAM240AA0A1B0GVK7 77 aa8.43□□□□□ -1.06
CHMP1A-209ENST00000550872 WFDC13Q8IUB5 93 aa8.43□□□□□ -1.06
CHMP1A-209ENST00000550872 ZCCHC13Q8WW36 166 aaKnown RBP8.43□□□□□ -1.06
CHMP1A-209ENST00000550872 CXCL6P80162 114 aa8.41□□□□□ -1.06
CHMP1A-209ENST00000550872 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
CHMP1A-209ENST00000550872 NDUFS5O43920 106 aa8.4□□□□□ -1.06
CHMP1A-209ENST00000550872 KRTAP19-2Q3LHN2 52 aa8.39□□□□□ -1.07
CHMP1A-209ENST00000550872 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
CHMP1A-209ENST00000550872 HCG22E2RYF7 251 aa8.36□□□□□ -1.07
CHMP1A-209ENST00000550872 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
CHMP1A-209ENST00000550872 J3QR89 54 aa8.31□□□□□ -1.08
CHMP1A-209ENST00000550872 ATP5EP2Q5VTU8 51 aa8.31□□□□□ -1.08
CHMP1A-209ENST00000550872 SPINK7P58062 85 aa8.3□□□□□ -1.08
CHMP1A-209ENST00000550872 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
CHMP1A-209ENST00000550872 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
CHMP1A-209ENST00000550872 HRES1P13985 223 aa8.27□□□□□ -1.09
CHMP1A-209ENST00000550872 Q5W150 140 aa8.26□□□□□ -1.09
CHMP1A-209ENST00000550872 HIST1H4AP62805 103 aaKnown RBP8.25□□□□□ -1.09
CHMP1A-209ENST00000550872 MT1HP80294 61 aa8.25□□□□□ -1.09
CHMP1A-209ENST00000550872 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
CHMP1A-209ENST00000550872 FAM236DA0A1B0GTK5 79 aa8.23□□□□□ -1.09
CHMP1A-209ENST00000550872 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
CHMP1A-209ENST00000550872 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
CHMP1A-209ENST00000550872 IGKV2D-30A0A075B6S6 120 aa8.19□□□□□ -1.1
CHMP1A-209ENST00000550872 IGKV2-30P06310 120 aa8.19□□□□□ -1.1
CHMP1A-209ENST00000550872 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
CHMP1A-209ENST00000550872 M0R2T5 61 aa8.18□□□□□ -1.1
CHMP1A-209ENST00000550872 C7orf65Q6ZTY9 151 aa8.16□□□□□ -1.1
CHMP1A-209ENST00000550872 A0A087WVE0 104 aa8.15□□□□□ -1.1
CHMP1A-209ENST00000550872 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
CHMP1A-209ENST00000550872 K7ERU9 68 aa8.13□□□□□ -1.11
CHMP1A-209ENST00000550872 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
CHMP1A-209ENST00000550872 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
CHMP1A-209ENST00000550872 UQCRQO14949 82 aa8.05□□□□□ -1.12
CHMP1A-209ENST00000550872 KRTAP10-6P60371 365 aaPredicted RBP8.05□□□□□ -1.12
CHMP1A-209ENST00000550872 TRAV22A0A0B4J277 110 aa8.04□□□□□ -1.12
CHMP1A-209ENST00000550872 LORP23490 312 aaPredicted RBP8.01□□□□□ -1.13
CHMP1A-209ENST00000550872 C4orf26Q17RF5 130 aa8.01□□□□□ -1.13
CHMP1A-209ENST00000550872 MT-ATP8P03928 68 aa7.99□□□□□ -1.13
CHMP1A-209ENST00000550872 LOC101927531A0A1B0GV80 90 aa7.98□□□□□ -1.13
CHMP1A-209ENST00000550872 H0Y9P7 68 aa7.98□□□□□ -1.13
CHMP1A-209ENST00000550872 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
CHMP1A-209ENST00000550872 IMUPQ9GZP8 106 aa7.97□□□□□ -1.13
CHMP1A-209ENST00000550872 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
CHMP1A-209ENST00000550872 ATOX1O00244 68 aa7.96□□□□□ -1.14
CHMP1A-209ENST00000550872 SCGB1A1P11684 91 aa7.96□□□□□ -1.14
CHMP1A-209ENST00000550872 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
CHMP1A-209ENST00000550872 C1orf64Q8NEQ6 169 aa7.91□□□□□ -1.14
CHMP1A-209ENST00000550872 MP68P56378 58 aa7.89□□□□□ -1.15
CHMP1A-209ENST00000550872 LINC00208Q96KT6 92 aa7.89□□□□□ -1.15
CHMP1A-209ENST00000550872 C5orf47Q569G3 176 aa7.88□□□□□ -1.15
CHMP1A-209ENST00000550872 KRTAP3-1Q9BYR8 98 aa7.88□□□□□ -1.15
CHMP1A-209ENST00000550872 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
CHMP1A-209ENST00000550872 FAM236AA0A1B0GUQ0 79 aa7.84□□□□□ -1.15
CHMP1A-209ENST00000550872 FAM236BA0A1B0GV22 79 aa7.84□□□□□ -1.15
CHMP1A-209ENST00000550872 H3BPC8 53 aa7.81□□□□□ -1.16
CHMP1A-209ENST00000550872 SMIM20Q8N5G0 67 aa7.79□□□□□ -1.16
CHMP1A-209ENST00000550872 MT2AP02795 61 aa7.78□□□□□ -1.16
CHMP1A-209ENST00000550872 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
CHMP1A-209ENST00000550872 S4R3F8 94 aa7.77□□□□□ -1.17
CHMP1A-209ENST00000550872 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
CHMP1A-209ENST00000550872 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
CHMP1A-209ENST00000550872 MT1FP04733 61 aa7.72□□□□□ -1.17
CHMP1A-209ENST00000550872 LCA10Q71F78 164 aa7.71□□□□□ -1.18
CHMP1A-209ENST00000550872 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms