RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 A0A1B0GVX0 72 aa4.99□□□□□ -1.61
HDAC7-229ENST00000549883 M0R2T5 61 aa4.99□□□□□ -1.61
HDAC7-229ENST00000549883 TAX1BP3O14907 124 aa4.99□□□□□ -1.61
HDAC7-229ENST00000549883 MTURNQ8N3F0 131 aa4.99□□□□□ -1.61
HDAC7-229ENST00000549883 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
HDAC7-229ENST00000549883 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
HDAC7-229ENST00000549883 LOC110117498A0A087WWA1 95 aa4.98□□□□□ -1.61
HDAC7-229ENST00000549883 C9orf118A6NHY6 69 aa4.97□□□□□ -1.61
HDAC7-229ENST00000549883 JMJD7-PLA2G4BH0Y9G9 81 aa4.97□□□□□ -1.61
HDAC7-229ENST00000549883 TRBV20-1A0A075B6N2 111 aa4.96□□□□□ -1.62
HDAC7-229ENST00000549883 A0A1W2PPM0 123 aa4.95□□□□□ -1.62
HDAC7-229ENST00000549883 LYRM7Q5U5X0 104 aa4.95□□□□□ -1.62
HDAC7-229ENST00000549883 C8orf87E5RJ46 101 aa4.94□□□□□ -1.62
HDAC7-229ENST00000549883 HRES1P13985 223 aa4.94□□□□□ -1.62
HDAC7-229ENST00000549883 IGKV3D-7A0A0C4DH55 119 aa4.93□□□□□ -1.62
HDAC7-229ENST00000549883 J3KT08 172 aa4.93□□□□□ -1.62
HDAC7-229ENST00000549883 A8MWP4 228 aa4.92□□□□□ -1.62
HDAC7-229ENST00000549883 PDE6GP18545 87 aa4.92□□□□□ -1.62
HDAC7-229ENST00000549883 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
HDAC7-229ENST00000549883 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
HDAC7-229ENST00000549883 H3BT86 120 aa4.9□□□□□ -1.63
HDAC7-229ENST00000549883 SMCPP49901 116 aaPredicted RBP4.9□□□□□ -1.63
HDAC7-229ENST00000549883 C21orf62-AS1Q17RA5 79 aa4.9□□□□□ -1.63
HDAC7-229ENST00000549883 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
HDAC7-229ENST00000549883 ZCCHC13Q8WW36 166 aaKnown RBP4.9□□□□□ -1.63
HDAC7-229ENST00000549883 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
HDAC7-229ENST00000549883 A0A1B0GW54 56 aa4.89□□□□□ -1.63
HDAC7-229ENST00000549883 NDUFB1O75438 58 aa4.89□□□□□ -1.63
HDAC7-229ENST00000549883 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
HDAC7-229ENST00000549883 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
HDAC7-229ENST00000549883 NREPQ16612 68 aa4.88□□□□□ -1.63
HDAC7-229ENST00000549883 PRR15Q8IV56 129 aa4.88□□□□□ -1.63
HDAC7-229ENST00000549883 SPCS1Q9Y6A9 102 aa4.88□□□□□ -1.63
HDAC7-229ENST00000549883 FAM236DA0A1B0GTK5 79 aa4.87□□□□□ -1.63
HDAC7-229ENST00000549883 FAM236CP0DP71 79 aa4.87□□□□□ -1.63
HDAC7-229ENST00000549883 Q6ZVQ6 151 aa4.87□□□□□ -1.63
HDAC7-229ENST00000549883 MMP24-AS1A0A0U1RRL7 71 aa4.86□□□□□ -1.63
HDAC7-229ENST00000549883 K7EQZ3 153 aa4.86□□□□□ -1.63
HDAC7-229ENST00000549883 SPINK7P58062 85 aa4.86□□□□□ -1.63
HDAC7-229ENST00000549883 RBM12B-AS1Q9P1G2 102 aa4.84□□□□□ -1.63
HDAC7-229ENST00000549883 PRO0461Q9UI25 63 aa4.84□□□□□ -1.63
HDAC7-229ENST00000549883 COL5A1-AS1Q5SY13 56 aa4.83□□□□□ -1.64
HDAC7-229ENST00000549883 Q8N9L7 120 aa4.83□□□□□ -1.64
HDAC7-229ENST00000549883 MT2AP02795 61 aa4.82□□□□□ -1.64
HDAC7-229ENST00000549883 TMEM254Q8TBM7 123 aa4.82□□□□□ -1.64
HDAC7-229ENST00000549883 MRPL34Q9BQ48 92 aaKnown RBP4.82□□□□□ -1.64
HDAC7-229ENST00000549883 BPY2O14599 106 aa4.81□□□□□ -1.64
HDAC7-229ENST00000549883 hDV103S1A0JD37 113 aa4.8□□□□□ -1.64
HDAC7-229ENST00000549883 PCP4L1A6NKN8 68 aa4.8□□□□□ -1.64
HDAC7-229ENST00000549883 K7EP34 96 aa4.8□□□□□ -1.64
HDAC7-229ENST00000549883 MT1FP04733 61 aa4.79□□□□□ -1.64
HDAC7-229ENST00000549883 Q5W150 140 aa4.79□□□□□ -1.64
HDAC7-229ENST00000549883 WFDC13Q8IUB5 93 aa4.79□□□□□ -1.64
HDAC7-229ENST00000549883 LINC00846Q9NV44 126 aa4.78□□□□□ -1.64
HDAC7-229ENST00000549883 NDUFS5O43920 106 aa4.77□□□□□ -1.65
HDAC7-229ENST00000549883 CASC2Q6XLA1 102 aa4.74□□□□□ -1.65
HDAC7-229ENST00000549883 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
HDAC7-229ENST00000549883 HCG22E2RYF7 251 aa4.73□□□□□ -1.65
HDAC7-229ENST00000549883 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
HDAC7-229ENST00000549883 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
HDAC7-229ENST00000549883 LCE2BO14633 110 aa4.72□□□□□ -1.65
HDAC7-229ENST00000549883 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
HDAC7-229ENST00000549883 ETDBQ3ZM63 59 aa4.71□□□□□ -1.66
HDAC7-229ENST00000549883 GTF2H5Q6ZYL4 71 aa4.7□□□□□ -1.66
HDAC7-229ENST00000549883 UBL5Q9BZL1 73 aa4.7□□□□□ -1.66
HDAC7-229ENST00000549883 F8W1H4 67 aa4.68□□□□□ -1.66
HDAC7-229ENST00000549883 H1FX-AS1Q4G0G2 97 aa4.67□□□□□ -1.66
HDAC7-229ENST00000549883 C7orf65Q6ZTY9 151 aa4.67□□□□□ -1.66
HDAC7-229ENST00000549883 C4orf26Q17RF5 130 aa4.66□□□□□ -1.66
HDAC7-229ENST00000549883 CXCL6P80162 114 aa4.65□□□□□ -1.67
HDAC7-229ENST00000549883 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
HDAC7-229ENST00000549883 USH2AO75445 5202 aa4.6□□□□□ -1.67
HDAC7-229ENST00000549883 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
HDAC7-229ENST00000549883 SSPOA2VEC9 5147 aa4.59□□□□□ -1.68
HDAC7-229ENST00000549883 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
HDAC7-229ENST00000549883 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
HDAC7-229ENST00000549883 C5orf47Q569G3 176 aa4.55□□□□□ -1.68
HDAC7-229ENST00000549883 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
HDAC7-229ENST00000549883 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
HDAC7-229ENST00000549883 A0A1B0GV90 55 aa4.54□□□□□ -1.68
HDAC7-229ENST00000549883 ACYP1P07311 99 aa4.53□□□□□ -1.68
HDAC7-229ENST00000549883 FAM240AA0A1B0GVK7 77 aa4.52□□□□□ -1.69
HDAC7-229ENST00000549883 LCA10Q71F78 164 aa4.52□□□□□ -1.69
HDAC7-229ENST00000549883 CYP4F30PQ9H0H9 118 aa4.52□□□□□ -1.69
HDAC7-229ENST00000549883 A0A087WVE0 104 aa4.51□□□□□ -1.69
HDAC7-229ENST00000549883 HIST1H4AP62805 103 aaKnown RBP4.51□□□□□ -1.69
HDAC7-229ENST00000549883 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
HDAC7-229ENST00000549883 S4R3F8 94 aa4.51□□□□□ -1.69
HDAC7-229ENST00000549883 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
HDAC7-229ENST00000549883 ATP5EP2Q5VTU8 51 aa4.48□□□□□ -1.69
HDAC7-229ENST00000549883 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
HDAC7-229ENST00000549883 CSAG1Q6PB30 78 aa4.46□□□□□ -1.7
HDAC7-229ENST00000549883 LINC00643Q86TS7 51 aa4.45□□□□□ -1.7
HDAC7-229ENST00000549883 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
HDAC7-229ENST00000549883 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
HDAC7-229ENST00000549883 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
HDAC7-229ENST00000549883 H0Y9P7 68 aa4.44□□□□□ -1.7
HDAC7-229ENST00000549883 UQCRQO14949 82 aa4.44□□□□□ -1.7
HDAC7-229ENST00000549883 MT1BP07438 61 aa4.41□□□□□ -1.7
HDAC7-229ENST00000549883 KLKP1Q107X0 134 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms