RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 HIST1H4AP62805 103 aaKnown RBP2.76□□□□□ -1.97
NPAS3-204ENST00000546849 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 C3orf56Q8N813 242 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 OBSCN-AS1Q96MR7 158 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 CSMD3Q7Z407 3707 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 A0A1W2PNM2 257 aa2.75□□□□□ -1.97
NPAS3-204ENST00000546849 F8WEM9 126 aa2.75□□□□□ -1.97
NPAS3-204ENST00000546849 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
NPAS3-204ENST00000546849 PRM2P04554 102 aa2.75□□□□□ -1.97
NPAS3-204ENST00000546849 LINC00575Q6W349 94 aa2.75□□□□□ -1.97
NPAS3-204ENST00000546849 SOSTDC1Q6X4U4 206 aa2.75□□□□□ -1.97
NPAS3-204ENST00000546849 ZCCHC13Q8WW36 166 aaKnown RBP2.75□□□□□ -1.97
NPAS3-204ENST00000546849 C14orf132Q9NPU4 83 aa2.75□□□□□ -1.97
NPAS3-204ENST00000546849 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
NPAS3-204ENST00000546849 TRAV10A0A0B4J240 114 aa2.74□□□□□ -1.97
NPAS3-204ENST00000546849 C3orf84H3BNL1 204 aa2.74□□□□□ -1.97
NPAS3-204ENST00000546849 CRYGAP11844 174 aa2.74□□□□□ -1.97
NPAS3-204ENST00000546849 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
NPAS3-204ENST00000546849 LINC01556Q5JQF7 62 aa2.74□□□□□ -1.97
NPAS3-204ENST00000546849 LYPD5Q6UWN5 251 aa2.74□□□□□ -1.97
NPAS3-204ENST00000546849 STAB2Q8WWQ8 2551 aa2.74□□□□□ -1.97
NPAS3-204ENST00000546849 FRAS1Q86XX4 4008 aa2.73□□□□□ -1.97
NPAS3-204ENST00000546849 A0A096LPF7 62 aa2.73□□□□□ -1.97
NPAS3-204ENST00000546849 NCR3O14931 201 aa2.73□□□□□ -1.97
NPAS3-204ENST00000546849 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
NPAS3-204ENST00000546849 CLPSL2Q6UWE3 100 aa2.73□□□□□ -1.97
NPAS3-204ENST00000546849 B9D2Q9BPU9 175 aa2.73□□□□□ -1.97
NPAS3-204ENST00000546849 WFDC10AQ9H1F0 79 aa2.73□□□□□ -1.97
NPAS3-204ENST00000546849 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 DEFB131BA0A096LNP1 70 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 ETDCA0A1B0GVM5 59 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 ELOF1P60002 83 aaKnown RBP2.72□□□□□ -1.97
NPAS3-204ENST00000546849 HAMPP81172 84 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 NREPQ16612 68 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 C20orf166-AS1Q96NR2 134 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 UPK3BQ9BT76 320 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 LINC00474Q9P2X8 69 aa2.72□□□□□ -1.97
NPAS3-204ENST00000546849 ERC2-IT1O76042 136 aa2.71□□□□□ -1.98
NPAS3-204ENST00000546849 UNQ6190/PRO20217Q6UXQ8 127 aa2.71□□□□□ -1.98
NPAS3-204ENST00000546849 Q6ZQY7 126 aa2.71□□□□□ -1.98
NPAS3-204ENST00000546849 LINC00846Q9NV44 126 aa2.71□□□□□ -1.98
NPAS3-204ENST00000546849 IGKV3D-7A0A0C4DH55 119 aa2.7□□□□□ -1.98
NPAS3-204ENST00000546849 Q6ZQT0 140 aa2.7□□□□□ -1.98
NPAS3-204ENST00000546849 Q6ZRU5 148 aa2.7□□□□□ -1.98
NPAS3-204ENST00000546849 KCNQ1DNQ9H478 68 aa2.7□□□□□ -1.98
NPAS3-204ENST00000546849 NDUFB1O75438 58 aa2.69□□□□□ -1.98
NPAS3-204ENST00000546849 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
NPAS3-204ENST00000546849 ENHOQ6UWT2 76 aa2.69□□□□□ -1.98
NPAS3-204ENST00000546849 C6orf48Q9UBA6 75 aa2.69□□□□□ -1.98
NPAS3-204ENST00000546849 LINC00588Q9Y4M8 146 aa2.69□□□□□ -1.98
NPAS3-204ENST00000546849 TRBV7-4A0A0J9YYF1 115 aa2.68□□□□□ -1.98
NPAS3-204ENST00000546849 DEFB4AO15263 64 aa2.68□□□□□ -1.98
NPAS3-204ENST00000546849 UBE2DNLQ8IWF7 75 aa2.68□□□□□ -1.98
NPAS3-204ENST00000546849 Q6ZRX8 168 aa2.67□□□□□ -1.98
NPAS3-204ENST00000546849 SCXQ7RTU7 201 aa2.67□□□□□ -1.98
NPAS3-204ENST00000546849 SMCR5Q8TEV8 140 aa2.67□□□□□ -1.98
NPAS3-204ENST00000546849 XAGE1AQ9HD64 81 aa2.67□□□□□ -1.98
NPAS3-204ENST00000546849 SERP1Q9Y6X1 66 aa2.67□□□□□ -1.98
NPAS3-204ENST00000546849 DNAH7Q8WXX0 4024 aa2.66□□□□□ -1.98
NPAS3-204ENST00000546849 UBE2BP63146 152 aa2.66□□□□□ -1.98
NPAS3-204ENST00000546849 KLKP1Q107X0 134 aa2.66□□□□□ -1.98
NPAS3-204ENST00000546849 ESRGQ1W209 222 aa2.66□□□□□ -1.98
NPAS3-204ENST00000546849 C9orf116Q5BN46 136 aaPredicted RBP2.66□□□□□ -1.98
NPAS3-204ENST00000546849 DPH3Q96FX2 82 aa2.66□□□□□ -1.98
NPAS3-204ENST00000546849 IGLV5-48A0A075B6I7 105 aa2.65□□□□□ -1.99
NPAS3-204ENST00000546849 NUPR2A6NF83 97 aa2.65□□□□□ -1.99
NPAS3-204ENST00000546849 H3BPC8 53 aa2.65□□□□□ -1.99
NPAS3-204ENST00000546849 RPL37AP61513 92 aaKnown RBP2.65□□□□□ -1.99
NPAS3-204ENST00000546849 WFDC10BQ8IUB3 73 aa2.65□□□□□ -1.99
NPAS3-204ENST00000546849 PRR15Q8IV56 129 aa2.65□□□□□ -1.99
NPAS3-204ENST00000546849 C20orf197Q8N268 126 aa2.65□□□□□ -1.99
NPAS3-204ENST00000546849 DNAH9Q9NYC9 4486 aa2.64□□□□□ -1.99
NPAS3-204ENST00000546849 C1orf137Q5JT78 98 aa2.64□□□□□ -1.99
NPAS3-204ENST00000546849 CNBPP62633 177 aaKnown RBP2.63□□□□□ -1.99
NPAS3-204ENST00000546849 DEFB105AQ8NG35 78 aa2.63□□□□□ -1.99
NPAS3-204ENST00000546849 TMEM254Q8TBM7 123 aa2.63□□□□□ -1.99
NPAS3-204ENST00000546849 C22orf24Q9Y442 160 aa2.63□□□□□ -1.99
NPAS3-204ENST00000546849 DNAH3Q8TD57 4116 aa2.62□□□□□ -1.99
NPAS3-204ENST00000546849 A0A087WVE0 104 aa2.62□□□□□ -1.99
NPAS3-204ENST00000546849 SPRR1AP35321 89 aa2.62□□□□□ -1.99
NPAS3-204ENST00000546849 LINC00313P59037 77 aa2.62□□□□□ -1.99
NPAS3-204ENST00000546849 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
NPAS3-204ENST00000546849 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
NPAS3-204ENST00000546849 HCG22E2RYF7 251 aa2.61□□□□□ -1.99
NPAS3-204ENST00000546849 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
NPAS3-204ENST00000546849 MUC2Q02817 5179 aa2.6□□□□□ -1.99
NPAS3-204ENST00000546849 hDV103S1A0JD37 113 aa2.6□□□□□ -1.99
NPAS3-204ENST00000546849 KRTAP26-1Q6PEX3 210 aa2.6□□□□□ -1.99
NPAS3-204ENST00000546849 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
NPAS3-204ENST00000546849 TP53AIP1Q9HCN2 124 aa2.6□□□□□ -1.99
NPAS3-204ENST00000546849 KMT2AQ03164 3969 aa2.58□□□□□ -2
NPAS3-204ENST00000546849 H7BZZ5 65 aa2.58□□□□□ -2
NPAS3-204ENST00000546849 Q9BRP9 147 aa2.58□□□□□ -2
NPAS3-204ENST00000546849 DMBT1Q9UGM3 2413 aaPredicted RBP2.58□□□□□ -2
NPAS3-204ENST00000546849 STARD9Q9P2P6 4700 aa2.57□□□□□ -2
NPAS3-204ENST00000546849 SPRR1BP22528 89 aa2.57□□□□□ -2
NPAS3-204ENST00000546849 C9orf163Q8N9P6 203 aa2.57□□□□□ -2
NPAS3-204ENST00000546849 Q8NDZ9 215 aa2.57□□□□□ -2
NPAS3-204ENST00000546849 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
NPAS3-204ENST00000546849 KRTAP12-4P60329 112 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms