RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TRBV20-1A0A075B6N2 111 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 LOC107984156A0A0G2JMH3 177 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 TRBV7-6A0A0J9YX20 115 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 A0A1B0GX51 115 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 UMAD1C9J7I0 102 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 IL7P13232 177 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 COX7CP15954 63 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 IFI27P40305 119 aaPredicted RBP1.5□□□□□ -2.17
SNHG1-222ENST00000545308 GNG4P50150 75 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 ARL17AQ8IVW1 177 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 KCNRGQ8N5I3 272 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
SNHG1-222ENST00000545308 C20orf78Q9BR46 151 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 C2orf88Q9BSF0 95 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 TMEM191AQ9H0A3 160 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 TOMM7Q9P0U1 55 aa1.5□□□□□ -2.17
SNHG1-222ENST00000545308 ARPC5O15511 151 aa1.49□□□□□ -2.17
SNHG1-222ENST00000545308 COX17Q14061 63 aa1.49□□□□□ -2.17
SNHG1-222ENST00000545308 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
SNHG1-222ENST00000545308 ATP11AUNQ6ZP68 121 aa1.49□□□□□ -2.17
SNHG1-222ENST00000545308 SPRR4Q96PI1 79 aa1.49□□□□□ -2.17
SNHG1-222ENST00000545308 MANBALQ9NQG1 85 aa1.49□□□□□ -2.17
SNHG1-222ENST00000545308 FCGBPQ9Y6R7 5405 aaPredicted RBP1.49□□□□□ -2.17
SNHG1-222ENST00000545308 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 A0A1B0GUT8 65 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 LINC01549A6NIU2 74 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 C9JAW5 83 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 J3QR89 54 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 HBDP02042 147 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 CKS2P33552 79 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 SFTA2Q6UW10 78 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 LINC00299Q6ZSB3 139 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 TMEM141Q96I45 108 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 SMIM7Q9BQ49 75 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 CYSTM1Q9H1C7 97 aa1.48□□□□□ -2.17
SNHG1-222ENST00000545308 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
SNHG1-222ENST00000545308 TRAV23DV6A0A075B6W5 121 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 LOC105371267A0A1B0GV96 52 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 UQCRQO14949 82 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 MT-ND4LP03901 98 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 S100A8P05109 93 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 PRLHP81277 87 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 Q6ZUT4 128 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 S100ZQ8WXG8 99 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 HSPB8Q9UJY1 196 aa1.47□□□□□ -2.17
SNHG1-222ENST00000545308 A0A087WSZ3 146 aa1.46□□□□□ -2.18
SNHG1-222ENST00000545308 C9orf92A6NGG3 77 aa1.46□□□□□ -2.18
SNHG1-222ENST00000545308 K7EMI3 77 aa1.46□□□□□ -2.18
SNHG1-222ENST00000545308 RPL37P61927 97 aaKnown RBP1.46□□□□□ -2.18
SNHG1-222ENST00000545308 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
SNHG1-222ENST00000545308 RPL7L1Q6DKI1 246 aaKnown RBP1.46□□□□□ -2.18
SNHG1-222ENST00000545308 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
SNHG1-222ENST00000545308 RPL39P62891 51 aaKnown RBP1.45□□□□□ -2.18
SNHG1-222ENST00000545308 MIR22HGQ0VDD5 57 aa1.45□□□□□ -2.18
SNHG1-222ENST00000545308 C9orf153Q5TBE3 101 aa1.45□□□□□ -2.18
SNHG1-222ENST00000545308 FAM213BQ8TBF2 198 aa1.45□□□□□ -2.18
SNHG1-222ENST00000545308 COX7B2Q8TF08 81 aa1.45□□□□□ -2.18
SNHG1-222ENST00000545308 GNG13Q9P2W3 67 aa1.45□□□□□ -2.18
SNHG1-222ENST00000545308 FXYD6-FXYD2A0A087WZ82 144 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 HIGD1CA8MV81 97 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 JMJD7-PLA2G4BH0Y9G9 81 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 Q5BKY6 102 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 ALKAL2Q6UX46 152 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 OBSCN-AS1Q96MR7 158 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 AMELXQ99217 191 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 SMIM2Q9BVW6 85 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
SNHG1-222ENST00000545308 USH2AO75445 5202 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 KANTRA0A1W2PQU2 76 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 K7ERU9 68 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 INE1O15225 51 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 AKR1D1P51857 326 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 Q5XG85 94 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 PRO1933Q9H354 126 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 KCNQ1DNQ9H478 68 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 CDKN2A-AS1Q9UH64 79 aa1.43□□□□□ -2.18
SNHG1-222ENST00000545308 SYNE2Q8WXH0 6885 aaKnown RBP1.42□□□□□ -2.18
SNHG1-222ENST00000545308 LOC110117498A0A087WWA1 95 aa1.42□□□□□ -2.18
SNHG1-222ENST00000545308 SPRR1AP35321 89 aa1.42□□□□□ -2.18
SNHG1-222ENST00000545308 LINC00158P58513 81 aa1.42□□□□□ -2.18
SNHG1-222ENST00000545308 ERG28Q9UKR5 140 aa1.42□□□□□ -2.18
SNHG1-222ENST00000545308 SPATA45Q537H7 98 aa1.41□□□□□ -2.18
SNHG1-222ENST00000545308 Q8N8P6 123 aa1.41□□□□□ -2.18
SNHG1-222ENST00000545308 NXT2Q9NPJ8 142 aaKnown RBP1.41□□□□□ -2.18
SNHG1-222ENST00000545308 IGIPA6NJ69 53 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 ZNF815PA8K554 130 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 D6R8Y8 96 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 NCR3O14931 201 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 MT2AP02795 61 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 CLLU1Q5K131 121 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 Q6ZRX8 168 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 VPS25Q9BRG1 176 aa1.4□□□□□ -2.19
SNHG1-222ENST00000545308 SMIM27A0A1W2PRY6 76 aa1.39□□□□□ -2.19
SNHG1-222ENST00000545308 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
SNHG1-222ENST00000545308 TEX49A0A1B0GTD5 131 aa1.38□□□□□ -2.19
SNHG1-222ENST00000545308 SPINK8P0C7L1 97 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms