RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 A0A1W2PPM0 123 aa6.92□□□□□ -1.3
DDX55-213ENST00000545042 C8orf87E5RJ46 101 aa6.92□□□□□ -1.3
DDX55-213ENST00000545042 TAX1BP3O14907 124 aa6.92□□□□□ -1.3
DDX55-213ENST00000545042 C14orf132Q9NPU4 83 aa6.92□□□□□ -1.3
DDX55-213ENST00000545042 MT1HP80294 61 aa6.91□□□□□ -1.3
DDX55-213ENST00000545042 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
DDX55-213ENST00000545042 H3BT86 120 aa6.9□□□□□ -1.3
DDX55-213ENST00000545042 NDUFB1O75438 58 aa6.9□□□□□ -1.3
DDX55-213ENST00000545042 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.3
DDX55-213ENST00000545042 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
DDX55-213ENST00000545042 M0R2T5 61 aa6.86□□□□□ -1.31
DDX55-213ENST00000545042 NREPQ16612 68 aa6.85□□□□□ -1.31
DDX55-213ENST00000545042 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
DDX55-213ENST00000545042 SPCS1Q9Y6A9 102 aa6.85□□□□□ -1.31
DDX55-213ENST00000545042 A8MWP4 228 aa6.84□□□□□ -1.31
DDX55-213ENST00000545042 COL5A1-AS1Q5SY13 56 aa6.84□□□□□ -1.31
DDX55-213ENST00000545042 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
DDX55-213ENST00000545042 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
DDX55-213ENST00000545042 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
DDX55-213ENST00000545042 FLGP20930 4061 aaPredicted RBP6.77□□□□□ -1.33
DDX55-213ENST00000545042 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.33
DDX55-213ENST00000545042 FAM236DA0A1B0GTK5 79 aa6.76□□□□□ -1.33
DDX55-213ENST00000545042 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
DDX55-213ENST00000545042 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
DDX55-213ENST00000545042 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
DDX55-213ENST00000545042 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
DDX55-213ENST00000545042 Q6ZVQ6 151 aa6.75□□□□□ -1.33
DDX55-213ENST00000545042 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
DDX55-213ENST00000545042 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
DDX55-213ENST00000545042 K7EP34 96 aa6.73□□□□□ -1.33
DDX55-213ENST00000545042 BPY2O14599 106 aa6.73□□□□□ -1.33
DDX55-213ENST00000545042 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
DDX55-213ENST00000545042 PCP4L1A6NKN8 68 aa6.71□□□□□ -1.34
DDX55-213ENST00000545042 HRES1P13985 223 aa6.71□□□□□ -1.34
DDX55-213ENST00000545042 TMEM254Q8TBM7 123 aa6.71□□□□□ -1.34
DDX55-213ENST00000545042 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
DDX55-213ENST00000545042 K7EQZ3 153 aa6.7□□□□□ -1.34
DDX55-213ENST00000545042 GTF2H5Q6ZYL4 71 aa6.7□□□□□ -1.34
DDX55-213ENST00000545042 MRPL34Q9BQ48 92 aaKnown RBP6.7□□□□□ -1.34
DDX55-213ENST00000545042 KRTAP9-6A0A140TA67 174 aa6.69□□□□□ -1.34
DDX55-213ENST00000545042 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
DDX55-213ENST00000545042 SPINK7P58062 85 aa6.69□□□□□ -1.34
DDX55-213ENST00000545042 PRO0461Q9UI25 63 aa6.69□□□□□ -1.34
DDX55-213ENST00000545042 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
DDX55-213ENST00000545042 NDUFS5O43920 106 aa6.67□□□□□ -1.34
DDX55-213ENST00000545042 UBL5Q9BZL1 73 aa6.66□□□□□ -1.34
DDX55-213ENST00000545042 F8W1H4 67 aa6.63□□□□□ -1.35
DDX55-213ENST00000545042 Q8N9L7 120 aa6.62□□□□□ -1.35
DDX55-213ENST00000545042 LINC00846Q9NV44 126 aa6.62□□□□□ -1.35
DDX55-213ENST00000545042 CASC2Q6XLA1 102 aa6.61□□□□□ -1.35
DDX55-213ENST00000545042 WFDC13Q8IUB5 93 aa6.6□□□□□ -1.35
DDX55-213ENST00000545042 ETDBQ3ZM63 59 aa6.57□□□□□ -1.36
DDX55-213ENST00000545042 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
DDX55-213ENST00000545042 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
DDX55-213ENST00000545042 IGKV2D-30A0A075B6S6 120 aa6.53□□□□□ -1.36
DDX55-213ENST00000545042 IGKV2-30P06310 120 aa6.53□□□□□ -1.36
DDX55-213ENST00000545042 CXCL6P80162 114 aa6.53□□□□□ -1.36
DDX55-213ENST00000545042 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
DDX55-213ENST00000545042 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
DDX55-213ENST00000545042 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
DDX55-213ENST00000545042 Q5W150 140 aa6.51□□□□□ -1.37
DDX55-213ENST00000545042 MT2AP02795 61 aa6.46□□□□□ -1.38
DDX55-213ENST00000545042 ACYP1P07311 99 aa6.46□□□□□ -1.38
DDX55-213ENST00000545042 H1FX-AS1Q4G0G2 97 aa6.46□□□□□ -1.38
DDX55-213ENST00000545042 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
DDX55-213ENST00000545042 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
DDX55-213ENST00000545042 FAM240AA0A1B0GVK7 77 aa6.41□□□□□ -1.38
DDX55-213ENST00000545042 MT1FP04733 61 aa6.4□□□□□ -1.38
DDX55-213ENST00000545042 C4orf26Q17RF5 130 aa6.39□□□□□ -1.39
DDX55-213ENST00000545042 ATP5EP2Q5VTU8 51 aa6.39□□□□□ -1.39
DDX55-213ENST00000545042 HIST1H4AP62805 103 aaKnown RBP6.34□□□□□ -1.39
DDX55-213ENST00000545042 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
DDX55-213ENST00000545042 A0A1B0GV90 55 aa6.32□□□□□ -1.4
DDX55-213ENST00000545042 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
DDX55-213ENST00000545042 TRAV22A0A0B4J277 110 aa6.29□□□□□ -1.4
DDX55-213ENST00000545042 LINC00643Q86TS7 51 aa6.29□□□□□ -1.4
DDX55-213ENST00000545042 LCE2BO14633 110 aa6.27□□□□□ -1.41
DDX55-213ENST00000545042 USH2AO75445 5202 aa6.27□□□□□ -1.41
DDX55-213ENST00000545042 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
DDX55-213ENST00000545042 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
DDX55-213ENST00000545042 UQCRQO14949 82 aa6.26□□□□□ -1.41
DDX55-213ENST00000545042 CYP4F30PQ9H0H9 118 aa6.26□□□□□ -1.41
DDX55-213ENST00000545042 S4R3F8 94 aa6.26□□□□□ -1.41
DDX55-213ENST00000545042 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
DDX55-213ENST00000545042 C5orf47Q569G3 176 aa6.24□□□□□ -1.41
DDX55-213ENST00000545042 J3QR89 54 aa6.23□□□□□ -1.41
DDX55-213ENST00000545042 ATOX1O00244 68 aa6.23□□□□□ -1.41
DDX55-213ENST00000545042 A0A087WVE0 104 aa6.21□□□□□ -1.42
DDX55-213ENST00000545042 H0Y9P7 68 aa6.21□□□□□ -1.42
DDX55-213ENST00000545042 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
DDX55-213ENST00000545042 LCA10Q71F78 164 aa6.19□□□□□ -1.42
DDX55-213ENST00000545042 FAM236AA0A1B0GUQ0 79 aa6.17□□□□□ -1.42
DDX55-213ENST00000545042 FAM236BA0A1B0GV22 79 aa6.17□□□□□ -1.42
DDX55-213ENST00000545042 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
DDX55-213ENST00000545042 MP68P56378 58 aa6.13□□□□□ -1.43
DDX55-213ENST00000545042 LINC00208Q96KT6 92 aa6.12□□□□□ -1.43
DDX55-213ENST00000545042 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
DDX55-213ENST00000545042 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
DDX55-213ENST00000545042 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
DDX55-213ENST00000545042 A8MUN3 132 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms