RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 Q6ZQT0 140 aa12.03□□□□□ -0.48
CHFR-222ENST00000544093 LOC110117498A0A087WWA1 95 aa12.02□□□□□ -0.49
CHFR-222ENST00000544093 A0A1B0GVX0 72 aa12.01□□□□□ -0.49
CHFR-222ENST00000544093 BATFQ16520 125 aa12□□□□□ -0.49
CHFR-222ENST00000544093 NOTCH2NLQ7Z3S9 236 aa12□□□□□ -0.49
CHFR-222ENST00000544093 LOC105371267A0A1B0GV96 52 aa11.96□□□□□ -0.49
CHFR-222ENST00000544093 NDUFB1O75438 58 aa11.95□□□□□ -0.5
CHFR-222ENST00000544093 LORP23490 312 aaPredicted RBP11.95□□□□□ -0.5
CHFR-222ENST00000544093 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
CHFR-222ENST00000544093 FLGP20930 4061 aaPredicted RBP11.93□□□□□ -0.5
CHFR-222ENST00000544093 C14orf132Q9NPU4 83 aa11.92□□□□□ -0.5
CHFR-222ENST00000544093 C9orf118A6NHY6 69 aa11.91□□□□□ -0.5
CHFR-222ENST00000544093 KRTAP9-6A0A140TA67 174 aa11.87□□□□□ -0.51
CHFR-222ENST00000544093 H3BT86 120 aa11.87□□□□□ -0.51
CHFR-222ENST00000544093 A0A1W2PPM0 123 aa11.86□□□□□ -0.51
CHFR-222ENST00000544093 A8MWP4 228 aa11.86□□□□□ -0.51
CHFR-222ENST00000544093 TAX1BP3O14907 124 aa11.85□□□□□ -0.51
CHFR-222ENST00000544093 NREPQ16612 68 aa11.81□□□□□ -0.52
CHFR-222ENST00000544093 RBM12B-AS1Q9P1G2 102 aa11.81□□□□□ -0.52
CHFR-222ENST00000544093 Q8N9P0 234 aaPredicted RBP11.79□□□□□ -0.52
CHFR-222ENST00000544093 ZCCHC13Q8WW36 166 aaKnown RBP11.79□□□□□ -0.52
CHFR-222ENST00000544093 C8orf17Q9NRJ1 99 aa11.78□□□□□ -0.52
CHFR-222ENST00000544093 IGKV3D-7A0A0C4DH55 119 aa11.77□□□□□ -0.53
CHFR-222ENST00000544093 FAM236DA0A1B0GTK5 79 aa11.77□□□□□ -0.53
CHFR-222ENST00000544093 FAM236CP0DP71 79 aa11.77□□□□□ -0.53
CHFR-222ENST00000544093 HRES1P13985 223 aa11.74□□□□□ -0.53
CHFR-222ENST00000544093 PRR15Q8IV56 129 aa11.74□□□□□ -0.53
CHFR-222ENST00000544093 MPLKIPQ8TAP9 179 aa11.74□□□□□ -0.53
CHFR-222ENST00000544093 FSIP2Q5CZC0 6907 aa11.72□□□□□ -0.53
CHFR-222ENST00000544093 Q6ZVQ6 151 aa11.71□□□□□ -0.53
CHFR-222ENST00000544093 MTURNQ8N3F0 131 aa11.71□□□□□ -0.53
CHFR-222ENST00000544093 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
CHFR-222ENST00000544093 SPINK7P58062 85 aa11.66□□□□□ -0.54
CHFR-222ENST00000544093 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.54
CHFR-222ENST00000544093 CRCT1Q9UGL9 99 aa11.65□□□□□ -0.54
CHFR-222ENST00000544093 TMEM254Q8TBM7 123 aa11.64□□□□□ -0.55
CHFR-222ENST00000544093 MRPL34Q9BQ48 92 aaKnown RBP11.62□□□□□ -0.55
CHFR-222ENST00000544093 MMP24-AS1A0A0U1RRL7 71 aa11.61□□□□□ -0.55
CHFR-222ENST00000544093 BPY2O14599 106 aa11.61□□□□□ -0.55
CHFR-222ENST00000544093 K7EQZ3 153 aa11.59□□□□□ -0.55
CHFR-222ENST00000544093 hDV103S1A0JD37 113 aa11.58□□□□□ -0.56
CHFR-222ENST00000544093 KRTAP9-8Q9BYQ0 159 aa11.54□□□□□ -0.56
CHFR-222ENST00000544093 SMCPP49901 116 aaPredicted RBP11.53□□□□□ -0.56
CHFR-222ENST00000544093 K7EP34 96 aa11.51□□□□□ -0.57
CHFR-222ENST00000544093 NDUFS5O43920 106 aa11.5□□□□□ -0.57
CHFR-222ENST00000544093 WFDC13Q8IUB5 93 aa11.48□□□□□ -0.57
CHFR-222ENST00000544093 PRO0461Q9UI25 63 aa11.48□□□□□ -0.57
CHFR-222ENST00000544093 UBL5Q9BZL1 73 aa11.45□□□□□ -0.58
CHFR-222ENST00000544093 GTF2H5Q6ZYL4 71 aa11.43□□□□□ -0.58
CHFR-222ENST00000544093 CASC2Q6XLA1 102 aa11.42□□□□□ -0.58
CHFR-222ENST00000544093 MT2AP02795 61 aa11.39□□□□□ -0.59
CHFR-222ENST00000544093 Q8N9L7 120 aa11.39□□□□□ -0.59
CHFR-222ENST00000544093 LINC00846Q9NV44 126 aa11.39□□□□□ -0.59
CHFR-222ENST00000544093 F8W1H4 67 aa11.35□□□□□ -0.59
CHFR-222ENST00000544093 HCG22E2RYF7 251 aa11.33□□□□□ -0.6
CHFR-222ENST00000544093 C7orf65Q6ZTY9 151 aa11.33□□□□□ -0.6
CHFR-222ENST00000544093 CXCL6P80162 114 aa11.32□□□□□ -0.6
CHFR-222ENST00000544093 IGKV2D-30A0A075B6S6 120 aa11.3□□□□□ -0.6
CHFR-222ENST00000544093 PCP4L1A6NKN8 68 aa11.3□□□□□ -0.6
CHFR-222ENST00000544093 IGKV2-30P06310 120 aa11.3□□□□□ -0.6
CHFR-222ENST00000544093 Q5W150 140 aa11.3□□□□□ -0.6
CHFR-222ENST00000544093 MT1FP04733 61 aa11.29□□□□□ -0.6
CHFR-222ENST00000544093 KRTAP10-10P60014 251 aa11.29□□□□□ -0.6
CHFR-222ENST00000544093 H1FX-AS1Q4G0G2 97 aa11.26□□□□□ -0.61
CHFR-222ENST00000544093 ETDBQ3ZM63 59 aa11.23□□□□□ -0.61
CHFR-222ENST00000544093 KRTAP9-3Q9BYQ3 159 aa11.18□□□□□ -0.62
CHFR-222ENST00000544093 TP53AIP1Q9HCN2 124 aa11.14□□□□□ -0.63
CHFR-222ENST00000544093 USH2AO75445 5202 aa11.13□□□□□ -0.63
CHFR-222ENST00000544093 LCE2BO14633 110 aa11.08□□□□□ -0.64
CHFR-222ENST00000544093 ACYP1P07311 99 aa11.08□□□□□ -0.64
CHFR-222ENST00000544093 C4orf26Q17RF5 130 aa11.08□□□□□ -0.64
CHFR-222ENST00000544093 FAM240AA0A1B0GVK7 77 aa11.01□□□□□ -0.65
CHFR-222ENST00000544093 SSPOA2VEC9 5147 aa11.01□□□□□ -0.65
CHFR-222ENST00000544093 ATP5EP2Q5VTU8 51 aa10.98□□□□□ -0.65
CHFR-222ENST00000544093 C1orf64Q8NEQ6 169 aa10.92□□□□□ -0.66
CHFR-222ENST00000544093 KRTAP19-1Q8IUB9 90 aa10.89□□□□□ -0.67
CHFR-222ENST00000544093 KRTAP3-1Q9BYR8 98 aa10.88□□□□□ -0.67
CHFR-222ENST00000544093 S4R3F8 94 aa10.88□□□□□ -0.67
CHFR-222ENST00000544093 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
CHFR-222ENST00000544093 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
CHFR-222ENST00000544093 C5orf47Q569G3 176 aa10.84□□□□□ -0.67
CHFR-222ENST00000544093 CYP4F30PQ9H0H9 118 aa10.84□□□□□ -0.67
CHFR-222ENST00000544093 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.83□□□□□ -0.68
CHFR-222ENST00000544093 LOC101927531A0A1B0GV80 90 aa10.82□□□□□ -0.68
CHFR-222ENST00000544093 CSAG1Q6PB30 78 aa10.82□□□□□ -0.68
CHFR-222ENST00000544093 FCGBPQ9Y6R7 5405 aaPredicted RBP10.78□□□□□ -0.68
CHFR-222ENST00000544093 UQCRQO14949 82 aa10.77□□□□□ -0.69
CHFR-222ENST00000544093 LCA10Q71F78 164 aa10.77□□□□□ -0.69
CHFR-222ENST00000544093 LINC00643Q86TS7 51 aa10.77□□□□□ -0.69
CHFR-222ENST00000544093 ATOX1O00244 68 aa10.75□□□□□ -0.69
CHFR-222ENST00000544093 KRTAP19-6Q3LI70 58 aa10.75□□□□□ -0.69
CHFR-222ENST00000544093 FAM236AA0A1B0GUQ0 79 aa10.73□□□□□ -0.69
CHFR-222ENST00000544093 FAM236BA0A1B0GV22 79 aa10.73□□□□□ -0.69
CHFR-222ENST00000544093 KRTAP9-7A8MTY7 169 aa10.68□□□□□ -0.7
CHFR-222ENST00000544093 H0Y9P7 68 aa10.68□□□□□ -0.7
CHFR-222ENST00000544093 A0A1B0GV90 55 aa10.67□□□□□ -0.7
CHFR-222ENST00000544093 A0A087WVE0 104 aa10.64□□□□□ -0.71
CHFR-222ENST00000544093 J3QR89 54 aa10.6□□□□□ -0.71
CHFR-222ENST00000544093 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
CHFR-222ENST00000544093 MACF1Q9UPN3 7388 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms