RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 MIR7-3HGQ8N6C7 128 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 BORCS7Q96B45 105 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 SMIM12Q96EX1 92 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BLQ99880 126 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 SEC11CQ9BY50 192 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 CYSLTR1Q9Y271 337 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 A0A1B0GV72 72 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 A0A1W2PPM0 123 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 IGIPA6NJ69 53 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BKO60814 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 NDUFB6O95139 128 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BJP06899 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BOP23527 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 S100A2P29034 98 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BBP33778 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 FAUP35544 74 aaKnown RBP0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 H2BFSP57053 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BDP58876 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BCP62807 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 RPL23P62829 140 aaKnown RBP0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 RHEBQ15382 184 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST2H2BEQ16778 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 PYDC2Q56P42 97 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 COL5A1-AS1Q5SY13 56 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 AKR1C8PQ5T2L2 129 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 TRIQKQ629K1 86 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 C7orf65Q6ZTY9 151 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 C2orf91Q6ZV80 131 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 TEN1Q86WV5 123 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 SMIM4Q8WVI0 70 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BHQ93079 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BNQ99877 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST1H2BMQ99879 126 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 MIEN1Q9BRT3 115 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 MAP1LC3CQ9BXW4 147 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 LINC00472Q9H8W2 130 aa0.43□□□□□ -2.34
TRAV1-1-201ENST00000542354 A0A087WVE0 104 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 KANTRA0A1W2PQU2 76 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 A4D1N5 150 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 NAP1L6A6NFF2 107 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 UMAD1C9J7I0 102 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 K7ERU9 68 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 TAX1BP3O14907 124 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 SSNA1O43805 119 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 NDUFC2O95298 119 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 TRGC2P03986 189 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 IGLC3P0DOY3 106 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 FABP4P15090 132 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 ATP6V0CP27449 155 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 CKS2P33552 79 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 HERV-K104P63124 156 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 VAMP3Q15836 100 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 BATFQ16520 125 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 MEIG1Q5JSS6 88 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 RPL7L1Q6DKI1 246 aaKnown RBP0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 PET117Q6UWS5 81 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 TOMM5Q8N4H5 51 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 C1orf64Q8NEQ6 169 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 PPP1R1CQ8WVI7 109 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 MBD3L1Q8WWY6 194 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 RAB37Q96AX2 223 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 VPS25Q9BRG1 176 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 UQCR10Q9UDW1 63 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 NAT8Q9UHE5 227 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 LAMTOR2Q9Y2Q5 125 aa0.42□□□□□ -2.34
TRAV1-1-201ENST00000542354 A0A1B0GUT8 65 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 A0A1B0GVX0 72 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 A0A1B0GW15 77 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 A0A1B0GX51 115 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 K7EP34 96 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 PDE6DO43924 150 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 SRP19P09132 144 aaKnown RBP0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 NMUP48645 174 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 RPS28P62857 69 aaKnown RBP0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 CCL20P78556 96 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 SERF2P84101 59 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 HSD52Q0P140 79 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 BVES-AS1Q5T3Y7 98 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 MRPL54Q6P161 138 aaKnown RBP0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 C20orf197Q8N268 126 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 SMIM20Q8N5G0 67 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 C18orf32Q8TCD1 76 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 VAMP8Q9BV40 100 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 HSPB8Q9UJY1 196 aa0.41□□□□□ -2.34
TRAV1-1-201ENST00000542354 CTXND1A0A1B0GTU2 59 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 hDV103S1A0JD37 113 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 MAP1LC3B2A6NCE7 125 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 LINC01546A6NGU7 62 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 F8W1H4 67 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 TMEM250H0YL14 139 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 CCDC179H3BU77 68 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 J3QR89 54 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 MT-ATP8P03928 68 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 PET100P0DJ07 73 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 COX8AP10176 69 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 GNG4P50150 75 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 SEC61GP60059 68 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 ADIRFQ15847 76 aa0.4□□□□□ -2.35
TRAV1-1-201ENST00000542354 PMCHL1Q16048 86 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms