RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 A0A1B0GVX0 72 aa10.25□□□□□ -0.77
DDB1-220ENST00000542337 J3KT08 172 aa10.24□□□□□ -0.77
DDB1-220ENST00000542337 M0R143 59 aa10.2□□□□□ -0.78
DDB1-220ENST00000542337 ATXN8Q156A1 80 aa10.2□□□□□ -0.78
DDB1-220ENST00000542337 NDUFB1O75438 58 aa10.19□□□□□ -0.78
DDB1-220ENST00000542337 Q6ZQT0 140 aa10.18□□□□□ -0.78
DDB1-220ENST00000542337 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
DDB1-220ENST00000542337 HRES1P13985 223 aa10.15□□□□□ -0.78
DDB1-220ENST00000542337 MTURNQ8N3F0 131 aa10.15□□□□□ -0.78
DDB1-220ENST00000542337 KRTAP9-8Q9BYQ0 159 aa10.15□□□□□ -0.78
DDB1-220ENST00000542337 A0A1B0GW54 56 aa10.13□□□□□ -0.79
DDB1-220ENST00000542337 MPLKIPQ8TAP9 179 aa10.13□□□□□ -0.79
DDB1-220ENST00000542337 PDE6GP18545 87 aa10.12□□□□□ -0.79
DDB1-220ENST00000542337 ZCCHC13Q8WW36 166 aaKnown RBP10.12□□□□□ -0.79
DDB1-220ENST00000542337 NAA38Q9BRA0 125 aaKnown RBP10.11□□□□□ -0.79
DDB1-220ENST00000542337 LOC110117498A0A087WWA1 95 aa10.1□□□□□ -0.79
DDB1-220ENST00000542337 LYRM7Q5U5X0 104 aa10.09□□□□□ -0.79
DDB1-220ENST00000542337 A8MWP4 228 aa10.07□□□□□ -0.8
DDB1-220ENST00000542337 SPINK7P58062 85 aa10.05□□□□□ -0.8
DDB1-220ENST00000542337 Q8N9P0 234 aaPredicted RBP10.05□□□□□ -0.8
DDB1-220ENST00000542337 C8orf17Q9NRJ1 99 aa10.04□□□□□ -0.8
DDB1-220ENST00000542337 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
DDB1-220ENST00000542337 SMIM6P0DI80 62 aa10.02□□□□□ -0.81
DDB1-220ENST00000542337 IGKV3D-7A0A0C4DH55 119 aa10□□□□□ -0.81
DDB1-220ENST00000542337 MT2AP02795 61 aa10□□□□□ -0.81
DDB1-220ENST00000542337 NREPQ16612 68 aa10□□□□□ -0.81
DDB1-220ENST00000542337 Q6ZVQ6 151 aa9.98□□□□□ -0.81
DDB1-220ENST00000542337 TSTD3H0UI37 97 aa9.96□□□□□ -0.82
DDB1-220ENST00000542337 KRTAP10-10P60014 251 aa9.96□□□□□ -0.82
DDB1-220ENST00000542337 BATFQ16520 125 aa9.96□□□□□ -0.82
DDB1-220ENST00000542337 PRR15Q8IV56 129 aa9.95□□□□□ -0.82
DDB1-220ENST00000542337 MT1FP04733 61 aa9.91□□□□□ -0.82
DDB1-220ENST00000542337 WFDC13Q8IUB5 93 aa9.9□□□□□ -0.82
DDB1-220ENST00000542337 TMEM254Q8TBM7 123 aa9.89□□□□□ -0.83
DDB1-220ENST00000542337 USH2AO75445 5202 aa9.89□□□□□ -0.83
DDB1-220ENST00000542337 MRPL34Q9BQ48 92 aaKnown RBP9.88□□□□□ -0.83
DDB1-220ENST00000542337 H3BT86 120 aa9.87□□□□□ -0.83
DDB1-220ENST00000542337 C9orf118A6NHY6 69 aa9.85□□□□□ -0.83
DDB1-220ENST00000542337 MMP24-AS1A0A0U1RRL7 71 aa9.84□□□□□ -0.83
DDB1-220ENST00000542337 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
DDB1-220ENST00000542337 NDUFS5O43920 106 aa9.84□□□□□ -0.83
DDB1-220ENST00000542337 KRTAP9-3Q9BYQ3 159 aa9.83□□□□□ -0.84
DDB1-220ENST00000542337 A0A1W2PPM0 123 aa9.81□□□□□ -0.84
DDB1-220ENST00000542337 BPY2O14599 106 aa9.81□□□□□ -0.84
DDB1-220ENST00000542337 SSPOA2VEC9 5147 aa9.8□□□□□ -0.84
DDB1-220ENST00000542337 K7EQZ3 153 aa9.8□□□□□ -0.84
DDB1-220ENST00000542337 LCE2BO14633 110 aa9.79□□□□□ -0.84
DDB1-220ENST00000542337 TAX1BP3O14907 124 aa9.78□□□□□ -0.84
DDB1-220ENST00000542337 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.76□□□□□ -0.85
DDB1-220ENST00000542337 H1FX-AS1Q4G0G2 97 aa9.73□□□□□ -0.85
DDB1-220ENST00000542337 IGKV2D-30A0A075B6S6 120 aa9.7□□□□□ -0.86
DDB1-220ENST00000542337 IGKV2-30P06310 120 aa9.7□□□□□ -0.86
DDB1-220ENST00000542337 KRTAP19-1Q8IUB9 90 aa9.7□□□□□ -0.86
DDB1-220ENST00000542337 LINC00846Q9NV44 126 aa9.69□□□□□ -0.86
DDB1-220ENST00000542337 KRTAP9-7A8MTY7 169 aa9.68□□□□□ -0.86
DDB1-220ENST00000542337 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
DDB1-220ENST00000542337 SPCS1Q9Y6A9 102 aa9.68□□□□□ -0.86
DDB1-220ENST00000542337 CASC2Q6XLA1 102 aa9.67□□□□□ -0.86
DDB1-220ENST00000542337 LOC105371267A0A1B0GV96 52 aa9.65□□□□□ -0.86
DDB1-220ENST00000542337 Q5W150 140 aa9.64□□□□□ -0.87
DDB1-220ENST00000542337 Q8N9L7 120 aa9.64□□□□□ -0.87
DDB1-220ENST00000542337 FCGBPQ9Y6R7 5405 aaPredicted RBP9.64□□□□□ -0.87
DDB1-220ENST00000542337 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
DDB1-220ENST00000542337 CXCL6P80162 114 aa9.6□□□□□ -0.87
DDB1-220ENST00000542337 UBL5Q9BZL1 73 aa9.59□□□□□ -0.87
DDB1-220ENST00000542337 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
DDB1-220ENST00000542337 COL5A1-AS1Q5SY13 56 aa9.55□□□□□ -0.88
DDB1-220ENST00000542337 C4orf26Q17RF5 130 aa9.52□□□□□ -0.89
DDB1-220ENST00000542337 KRTAP19-6Q3LI70 58 aa9.51□□□□□ -0.89
DDB1-220ENST00000542337 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
DDB1-220ENST00000542337 K7EP34 96 aa9.47□□□□□ -0.89
DDB1-220ENST00000542337 GTF2H5Q6ZYL4 71 aa9.4□□□□□ -0.9
DDB1-220ENST00000542337 MACF1Q9UPN3 7388 aaKnown RBP9.4□□□□□ -0.91
DDB1-220ENST00000542337 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
DDB1-220ENST00000542337 C5orf47Q569G3 176 aa9.38□□□□□ -0.91
DDB1-220ENST00000542337 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
DDB1-220ENST00000542337 S4R3F8 94 aa9.36□□□□□ -0.91
DDB1-220ENST00000542337 FAM236AA0A1B0GUQ0 79 aa9.35□□□□□ -0.91
DDB1-220ENST00000542337 FAM236BA0A1B0GV22 79 aa9.35□□□□□ -0.91
DDB1-220ENST00000542337 F8W1H4 67 aa9.34□□□□□ -0.91
DDB1-220ENST00000542337 CSAG1Q6PB30 78 aa9.33□□□□□ -0.92
DDB1-220ENST00000542337 KRTAP3-1Q9BYR8 98 aa9.31□□□□□ -0.92
DDB1-220ENST00000542337 SYNE2Q8WXH0 6885 aaKnown RBP9.31□□□□□ -0.92
DDB1-220ENST00000542337 ETDBQ3ZM63 59 aa9.28□□□□□ -0.92
DDB1-220ENST00000542337 LCA10Q71F78 164 aa9.25□□□□□ -0.93
DDB1-220ENST00000542337 PCP4L1A6NKN8 68 aa9.18□□□□□ -0.94
DDB1-220ENST00000542337 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
DDB1-220ENST00000542337 ACYP1P07311 99 aa9.15□□□□□ -0.94
DDB1-220ENST00000542337 Q5VV11 94 aa9.15□□□□□ -0.94
DDB1-220ENST00000542337 TRAV22A0A0B4J277 110 aa9.14□□□□□ -0.95
DDB1-220ENST00000542337 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
DDB1-220ENST00000542337 KRTAP6-3Q3LI67 103 aa9.12□□□□□ -0.95
DDB1-220ENST00000542337 SPRR2GQ9BYE4 73 aa9.11□□□□□ -0.95
DDB1-220ENST00000542337 A6NN06 94 aa9.1□□□□□ -0.95
DDB1-220ENST00000542337 KLKP1Q107X0 134 aa9.09□□□□□ -0.95
DDB1-220ENST00000542337 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
DDB1-220ENST00000542337 MT1BP07438 61 aa9.06□□□□□ -0.96
DDB1-220ENST00000542337 HIST1H4AP62805 103 aaKnown RBP9.06□□□□□ -0.96
DDB1-220ENST00000542337 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
DDB1-220ENST00000542337 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms