RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 IGKV4-1P06312 121 aa13.1□□□□□ -0.31
CHFR-218ENST00000540963 DEFB116Q30KQ4 102 aa13.1□□□□□ -0.31
CHFR-218ENST00000540963 TMEM256-PLSCR3K7ERE1 68 aa13.09□□□□□ -0.31
CHFR-218ENST00000540963 H3BQ85 93 aa13.06□□□□□ -0.32
CHFR-218ENST00000540963 UQCR10Q9UDW1 63 aa13.06□□□□□ -0.32
CHFR-218ENST00000540963 CCKP06307 115 aa13.05□□□□□ -0.32
CHFR-218ENST00000540963 COX6CP09669 75 aa13.04□□□□□ -0.32
CHFR-218ENST00000540963 UBE2V1Q13404 147 aa13.04□□□□□ -0.32
CHFR-218ENST00000540963 TRACP01848 142 aa13.01□□□□□ -0.33
CHFR-218ENST00000540963 KRTAP6-3Q3LI67 103 aa13.01□□□□□ -0.33
CHFR-218ENST00000540963 TMA7Q9Y2S6 64 aaKnown RBP13.01□□□□□ -0.33
CHFR-218ENST00000540963 IGHV6-1A0A0B4J1U7 121 aa12.94□□□□□ -0.34
CHFR-218ENST00000540963 A8MWP4 228 aa12.94□□□□□ -0.34
CHFR-218ENST00000540963 SCGB1C2P0DMR2 95 aa12.91□□□□□ -0.34
CHFR-218ENST00000540963 RBM3P98179 157 aaKnown RBP12.91□□□□□ -0.34
CHFR-218ENST00000540963 VPS25Q9BRG1 176 aa12.89□□□□□ -0.35
CHFR-218ENST00000540963 BAALC-AS2P0C853 105 aa12.88□□□□□ -0.35
CHFR-218ENST00000540963 A0A1B0GVX0 72 aa12.86□□□□□ -0.35
CHFR-218ENST00000540963 C8orf87E5RJ46 101 aa12.86□□□□□ -0.35
CHFR-218ENST00000540963 SPINK7P58062 85 aa12.85□□□□□ -0.35
CHFR-218ENST00000540963 ZCCHC13Q8WW36 166 aaKnown RBP12.84□□□□□ -0.35
CHFR-218ENST00000540963 DSCR8Q96T75 97 aa12.83□□□□□ -0.36
CHFR-218ENST00000540963 Q6ZQT0 140 aa12.81□□□□□ -0.36
CHFR-218ENST00000540963 NAA38Q9BRA0 125 aaKnown RBP12.81□□□□□ -0.36
CHFR-218ENST00000540963 C9JAW5 83 aa12.78□□□□□ -0.36
CHFR-218ENST00000540963 Q8N9P0 234 aaPredicted RBP12.76□□□□□ -0.37
CHFR-218ENST00000540963 J3KT08 172 aa12.71□□□□□ -0.37
CHFR-218ENST00000540963 ATXN8Q156A1 80 aa12.68□□□□□ -0.38
CHFR-218ENST00000540963 WFDC13Q8IUB5 93 aa12.68□□□□□ -0.38
CHFR-218ENST00000540963 LOC110117498A0A087WWA1 95 aa12.67□□□□□ -0.38
CHFR-218ENST00000540963 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
CHFR-218ENST00000540963 IGKV3D-7A0A0C4DH55 119 aa12.64□□□□□ -0.39
CHFR-218ENST00000540963 M0R143 59 aa12.64□□□□□ -0.39
CHFR-218ENST00000540963 JMJD7-PLA2G4BH0Y9G9 81 aa12.63□□□□□ -0.39
CHFR-218ENST00000540963 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
CHFR-218ENST00000540963 NEBP20929 6669 aa12.62□□□□□ -0.39
CHFR-218ENST00000540963 C14orf132Q9NPU4 83 aa12.6□□□□□ -0.39
CHFR-218ENST00000540963 A0A1B0GW54 56 aa12.58□□□□□ -0.4
CHFR-218ENST00000540963 NDUFB1O75438 58 aa12.57□□□□□ -0.4
CHFR-218ENST00000540963 PDE6GP18545 87 aa12.53□□□□□ -0.4
CHFR-218ENST00000540963 SMIM6P0DI80 62 aa12.51□□□□□ -0.41
CHFR-218ENST00000540963 LYRM7Q5U5X0 104 aa12.51□□□□□ -0.41
CHFR-218ENST00000540963 PRR15Q8IV56 129 aa12.51□□□□□ -0.41
CHFR-218ENST00000540963 Q6ZVQ6 151 aa12.5□□□□□ -0.41
CHFR-218ENST00000540963 H1FX-AS1Q4G0G2 97 aa12.49□□□□□ -0.41
CHFR-218ENST00000540963 MMP24-AS1A0A0U1RRL7 71 aa12.46□□□□□ -0.41
CHFR-218ENST00000540963 NREPQ16612 68 aa12.44□□□□□ -0.42
CHFR-218ENST00000540963 MUC12Q9UKN1 5478 aa12.44□□□□□ -0.42
CHFR-218ENST00000540963 BATFQ16520 125 aa12.42□□□□□ -0.42
CHFR-218ENST00000540963 MRPL34Q9BQ48 92 aaKnown RBP12.38□□□□□ -0.43
CHFR-218ENST00000540963 TAX1BP3O14907 124 aa12.37□□□□□ -0.43
CHFR-218ENST00000540963 TMEM254Q8TBM7 123 aa12.37□□□□□ -0.43
CHFR-218ENST00000540963 K7EQZ3 153 aa12.36□□□□□ -0.43
CHFR-218ENST00000540963 C9orf118A6NHY6 69 aa12.35□□□□□ -0.43
CHFR-218ENST00000540963 KRTAP20-1Q3LI63 56 aa12.34□□□□□ -0.43
CHFR-218ENST00000540963 A6NN06 94 aa12.33□□□□□ -0.44
CHFR-218ENST00000540963 TSTD3H0UI37 97 aa12.33□□□□□ -0.44
CHFR-218ENST00000540963 H3BT86 120 aa12.32□□□□□ -0.44
CHFR-218ENST00000540963 A0A1W2PPM0 123 aa12.3□□□□□ -0.44
CHFR-218ENST00000540963 hDV103S1A0JD37 113 aa12.29□□□□□ -0.44
CHFR-218ENST00000540963 LOC105371267A0A1B0GV96 52 aa12.28□□□□□ -0.44
CHFR-218ENST00000540963 Q5W150 140 aa12.28□□□□□ -0.44
CHFR-218ENST00000540963 SMCPP49901 116 aaPredicted RBP12.2□□□□□ -0.46
CHFR-218ENST00000540963 Q8N9L7 120 aa12.2□□□□□ -0.46
CHFR-218ENST00000540963 BPY2O14599 106 aa12.19□□□□□ -0.46
CHFR-218ENST00000540963 NDUFS5O43920 106 aa12.19□□□□□ -0.46
CHFR-218ENST00000540963 MT1BP07438 61 aa12.18□□□□□ -0.46
CHFR-218ENST00000540963 KRTAP5-9P26371 169 aa12.15□□□□□ -0.46
CHFR-218ENST00000540963 Q5VV11 94 aa12.15□□□□□ -0.46
CHFR-218ENST00000540963 IGKV2D-30A0A075B6S6 120 aa12.13□□□□□ -0.47
CHFR-218ENST00000540963 IGKV2-30P06310 120 aa12.13□□□□□ -0.47
CHFR-218ENST00000540963 C7orf65Q6ZTY9 151 aa12.12□□□□□ -0.47
CHFR-218ENST00000540963 KRTAP19-8Q3LI54 63 aa12.1□□□□□ -0.47
CHFR-218ENST00000540963 KRTAP10-5P60370 271 aa12.08□□□□□ -0.48
CHFR-218ENST00000540963 SPCS1Q9Y6A9 102 aa12.08□□□□□ -0.48
CHFR-218ENST00000540963 FAM236AA0A1B0GUQ0 79 aa12.07□□□□□ -0.48
CHFR-218ENST00000540963 FAM236BA0A1B0GV22 79 aa12.07□□□□□ -0.48
CHFR-218ENST00000540963 CASC2Q6XLA1 102 aa12.07□□□□□ -0.48
CHFR-218ENST00000540963 SPRR2GQ9BYE4 73 aa12.07□□□□□ -0.48
CHFR-218ENST00000540963 HCG22E2RYF7 251 aa12.05□□□□□ -0.48
CHFR-218ENST00000540963 PRO0461Q9UI25 63 aa12.05□□□□□ -0.48
CHFR-218ENST00000540963 MDN1Q9NU22 5596 aa12.03□□□□□ -0.48
CHFR-218ENST00000540963 KMT2DO14686 5537 aa12.02□□□□□ -0.49
CHFR-218ENST00000540963 C4orf26Q17RF5 130 aa12□□□□□ -0.49
CHFR-218ENST00000540963 C5orf47Q569G3 176 aa11.99□□□□□ -0.49
CHFR-218ENST00000540963 KRTAP3-1Q9BYR8 98 aa11.96□□□□□ -0.49
CHFR-218ENST00000540963 CXCL6P80162 114 aa11.92□□□□□ -0.5
CHFR-218ENST00000540963 K7EP34 96 aa11.88□□□□□ -0.51
CHFR-218ENST00000540963 CSAG1Q6PB30 78 aa11.88□□□□□ -0.51
CHFR-218ENST00000540963 KRTAP2-3P0C7H8 128 aa11.87□□□□□ -0.51
CHFR-218ENST00000540963 COL5A1-AS1Q5SY13 56 aa11.87□□□□□ -0.51
CHFR-218ENST00000540963 KRTAP2-4Q9BYR9 128 aa11.87□□□□□ -0.51
CHFR-218ENST00000540963 UBL5Q9BZL1 73 aa11.86□□□□□ -0.51
CHFR-218ENST00000540963 S4R3F8 94 aa11.85□□□□□ -0.51
CHFR-218ENST00000540963 KLKP1Q107X0 134 aa11.8□□□□□ -0.52
CHFR-218ENST00000540963 LCA10Q71F78 164 aa11.75□□□□□ -0.53
CHFR-218ENST00000540963 C1orf64Q8NEQ6 169 aa11.71□□□□□ -0.53
CHFR-218ENST00000540963 IMUPQ9GZP8 106 aa11.7□□□□□ -0.54
CHFR-218ENST00000540963 ETDBQ3ZM63 59 aa11.65□□□□□ -0.54
CHFR-218ENST00000540963 CRIPTQ9P021 101 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms