RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 DNAL4O96015 105 aa9.42□□□□□ -0.9
LPCAT3-210ENST00000540090 CEND1Q8N111 149 aa9.41□□□□□ -0.9
LPCAT3-210ENST00000540090 C2orf91Q6ZV80 131 aa9.4□□□□□ -0.9
LPCAT3-210ENST00000540090 NEBP20929 6669 aa9.38□□□□□ -0.91
LPCAT3-210ENST00000540090 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
LPCAT3-210ENST00000540090 A6NJY4 79 aa9.37□□□□□ -0.91
LPCAT3-210ENST00000540090 J3KT08 172 aa9.35□□□□□ -0.91
LPCAT3-210ENST00000540090 S100A6P06703 90 aa9.35□□□□□ -0.91
LPCAT3-210ENST00000540090 UBE2V1Q13404 147 aa9.35□□□□□ -0.91
LPCAT3-210ENST00000540090 FXYD2P54710 66 aa9.34□□□□□ -0.91
LPCAT3-210ENST00000540090 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
LPCAT3-210ENST00000540090 MUC12Q9UKN1 5478 aa9.34□□□□□ -0.91
LPCAT3-210ENST00000540090 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
LPCAT3-210ENST00000540090 PAM16Q9Y3D7 125 aa9.32□□□□□ -0.92
LPCAT3-210ENST00000540090 RBM3P98179 157 aaKnown RBP9.29□□□□□ -0.92
LPCAT3-210ENST00000540090 LYRM7Q5U5X0 104 aa9.29□□□□□ -0.92
LPCAT3-210ENST00000540090 NDUFB1O75438 58 aa9.28□□□□□ -0.92
LPCAT3-210ENST00000540090 PSMB2P49721 201 aa9.28□□□□□ -0.92
LPCAT3-210ENST00000540090 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
LPCAT3-210ENST00000540090 DSCR8Q96T75 97 aa9.27□□□□□ -0.93
LPCAT3-210ENST00000540090 COX6CP09669 75 aa9.26□□□□□ -0.93
LPCAT3-210ENST00000540090 C8orf17Q9NRJ1 99 aa9.26□□□□□ -0.93
LPCAT3-210ENST00000540090 C21orf62-AS1Q17RA5 79 aa9.25□□□□□ -0.93
LPCAT3-210ENST00000540090 Q6ZQT0 140 aa9.25□□□□□ -0.93
LPCAT3-210ENST00000540090 IGKV3D-7A0A0C4DH55 119 aa9.22□□□□□ -0.93
LPCAT3-210ENST00000540090 VAMP8Q9BV40 100 aa9.22□□□□□ -0.93
LPCAT3-210ENST00000540090 K7ERJ3 54 aa9.2□□□□□ -0.94
LPCAT3-210ENST00000540090 S100A1P23297 94 aa9.2□□□□□ -0.94
LPCAT3-210ENST00000540090 C9JAW5 83 aa9.19□□□□□ -0.94
LPCAT3-210ENST00000540090 Q6ZVQ6 151 aa9.18□□□□□ -0.94
LPCAT3-210ENST00000540090 KRTAP20-1Q3LI63 56 aa9.17□□□□□ -0.94
LPCAT3-210ENST00000540090 A6NN06 94 aa9.16□□□□□ -0.94
LPCAT3-210ENST00000540090 HSD52Q0P140 79 aa9.13□□□□□ -0.95
LPCAT3-210ENST00000540090 BAALC-AS2P0C853 105 aa9.11□□□□□ -0.95
LPCAT3-210ENST00000540090 A0A1B0GW54 56 aa9.09□□□□□ -0.95
LPCAT3-210ENST00000540090 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
LPCAT3-210ENST00000540090 MT1BP07438 61 aa9.08□□□□□ -0.96
LPCAT3-210ENST00000540090 SCGB1C2P0DMR2 95 aa9.08□□□□□ -0.96
LPCAT3-210ENST00000540090 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
LPCAT3-210ENST00000540090 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
LPCAT3-210ENST00000540090 MMP24-AS1A0A0U1RRL7 71 aa9.03□□□□□ -0.96
LPCAT3-210ENST00000540090 KRTAP5-9P26371 169 aa9.02□□□□□ -0.97
LPCAT3-210ENST00000540090 Q5VV11 94 aa9.02□□□□□ -0.97
LPCAT3-210ENST00000540090 LOC110117498A0A087WWA1 95 aa9.01□□□□□ -0.97
LPCAT3-210ENST00000540090 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
LPCAT3-210ENST00000540090 JMJD7-PLA2G4BH0Y9G9 81 aa9□□□□□ -0.97
LPCAT3-210ENST00000540090 IGKV2-30P06310 120 aa9□□□□□ -0.97
LPCAT3-210ENST00000540090 KRTAP19-8Q3LI54 63 aa8.99□□□□□ -0.97
LPCAT3-210ENST00000540090 MDN1Q9NU22 5596 aa8.99□□□□□ -0.97
LPCAT3-210ENST00000540090 KMT2DO14686 5537 aa8.99□□□□□ -0.97
LPCAT3-210ENST00000540090 KRTAP10-5P60370 271 aa8.98□□□□□ -0.97
LPCAT3-210ENST00000540090 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
LPCAT3-210ENST00000540090 NDUFS5O43920 106 aa8.97□□□□□ -0.97
LPCAT3-210ENST00000540090 PDE6GP18545 87 aa8.97□□□□□ -0.97
LPCAT3-210ENST00000540090 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
LPCAT3-210ENST00000540090 FAM236AA0A1B0GUQ0 79 aa8.96□□□□□ -0.98
LPCAT3-210ENST00000540090 FAM236BA0A1B0GV22 79 aa8.96□□□□□ -0.98
LPCAT3-210ENST00000540090 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.98
LPCAT3-210ENST00000540090 NREPQ16612 68 aa8.95□□□□□ -0.98
LPCAT3-210ENST00000540090 Q5W150 140 aa8.95□□□□□ -0.98
LPCAT3-210ENST00000540090 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
LPCAT3-210ENST00000540090 C4orf26Q17RF5 130 aa8.92□□□□□ -0.98
LPCAT3-210ENST00000540090 K7EQZ3 153 aa8.89□□□□□ -0.99
LPCAT3-210ENST00000540090 PYY3Q5JQD4 70 aa8.89□□□□□ -0.99
LPCAT3-210ENST00000540090 C14orf132Q9NPU4 83 aa8.89□□□□□ -0.99
LPCAT3-210ENST00000540090 ATXN8Q156A1 80 aa8.88□□□□□ -0.99
LPCAT3-210ENST00000540090 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
LPCAT3-210ENST00000540090 KRTAP2-3P0C7H8 128 aa8.82□□□□□ -1
LPCAT3-210ENST00000540090 CSAG1Q6PB30 78 aa8.82□□□□□ -1
LPCAT3-210ENST00000540090 KRTAP2-4Q9BYR9 128 aa8.82□□□□□ -1
LPCAT3-210ENST00000540090 KRTAP3-1Q9BYR8 98 aa8.81□□□□□ -1
LPCAT3-210ENST00000540090 S4R3F8 94 aa8.79□□□□□ -1
LPCAT3-210ENST00000540090 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
LPCAT3-210ENST00000540090 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
LPCAT3-210ENST00000540090 NAA38Q9BRA0 125 aaKnown RBP8.75□□□□□ -1.01
LPCAT3-210ENST00000540090 LCA10Q71F78 164 aa8.74□□□□□ -1.01
LPCAT3-210ENST00000540090 BPY2O14599 106 aa8.73□□□□□ -1.01
LPCAT3-210ENST00000540090 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
LPCAT3-210ENST00000540090 CXCL6P80162 114 aa8.7□□□□□ -1.02
LPCAT3-210ENST00000540090 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
LPCAT3-210ENST00000540090 IMUPQ9GZP8 106 aa8.68□□□□□ -1.02
LPCAT3-210ENST00000540090 Q8N9L7 120 aa8.67□□□□□ -1.02
LPCAT3-210ENST00000540090 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
LPCAT3-210ENST00000540090 TMA7Q9Y2S6 64 aaKnown RBP8.62□□□□□ -1.03
LPCAT3-210ENST00000540090 CRIPTQ9P021 101 aa8.61□□□□□ -1.03
LPCAT3-210ENST00000540090 M0R143 59 aa8.6□□□□□ -1.03
LPCAT3-210ENST00000540090 SPRR2FQ96RM1 72 aa8.6□□□□□ -1.03
LPCAT3-210ENST00000540090 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
LPCAT3-210ENST00000540090 SPRR2EP22531 72 aa8.59□□□□□ -1.03
LPCAT3-210ENST00000540090 SPRR2BP35325 72 aa8.59□□□□□ -1.03
LPCAT3-210ENST00000540090 SPRR2AP35326 72 aa8.59□□□□□ -1.03
LPCAT3-210ENST00000540090 H3BT86 120 aa8.53□□□□□ -1.04
LPCAT3-210ENST00000540090 KRTAP2-2Q9BYT5 123 aa8.51□□□□□ -1.05
LPCAT3-210ENST00000540090 KRTAP2-1Q9BYU5 128 aa8.51□□□□□ -1.05
LPCAT3-210ENST00000540090 TSTD3H0UI37 97 aa8.45□□□□□ -1.06
LPCAT3-210ENST00000540090 LCE1AQ5T7P2 110 aa8.44□□□□□ -1.06
LPCAT3-210ENST00000540090 A0A087WVE0 104 aa8.41□□□□□ -1.06
LPCAT3-210ENST00000540090 KRTAP8-1Q8IUC2 63 aa8.41□□□□□ -1.06
LPCAT3-210ENST00000540090 PRO2289Q9P1D8 64 aa8.41□□□□□ -1.06
LPCAT3-210ENST00000540090 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms