RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 A8MUU9 505 aa12.16□□□□□ -0.46
CLTA-210ENST00000540080 NOTCH2NLQ7Z3S9 236 aa12.16□□□□□ -0.46
CLTA-210ENST00000540080 A0A1B0GW54 56 aa12.15□□□□□ -0.46
CLTA-210ENST00000540080 J3KT08 172 aa12.12□□□□□ -0.47
CLTA-210ENST00000540080 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
CLTA-210ENST00000540080 KRTAP16-1A8MUX0 517 aa12.1□□□□□ -0.47
CLTA-210ENST00000540080 KRTAP19-2Q3LHN2 52 aa12.09□□□□□ -0.47
CLTA-210ENST00000540080 LCE2CQ5TA81 110 aa12.08□□□□□ -0.48
CLTA-210ENST00000540080 C8orf87E5RJ46 101 aa12.05□□□□□ -0.48
CLTA-210ENST00000540080 SMCPP49901 116 aaPredicted RBP12.04□□□□□ -0.48
CLTA-210ENST00000540080 NREPQ16612 68 aa12.04□□□□□ -0.48
CLTA-210ENST00000540080 K7EP34 96 aa12.03□□□□□ -0.48
CLTA-210ENST00000540080 NDUFB1O75438 58 aa12.03□□□□□ -0.48
CLTA-210ENST00000540080 A8MWP4 228 aa11.99□□□□□ -0.49
CLTA-210ENST00000540080 PRO0461Q9UI25 63 aa11.98□□□□□ -0.49
CLTA-210ENST00000540080 IGKV3D-7A0A0C4DH55 119 aa11.96□□□□□ -0.49
CLTA-210ENST00000540080 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
CLTA-210ENST00000540080 KRTAP9-2Q9BYQ4 174 aa11.94□□□□□ -0.5
CLTA-210ENST00000540080 C8orf17Q9NRJ1 99 aa11.93□□□□□ -0.5
CLTA-210ENST00000540080 MT1HP80294 61 aa11.92□□□□□ -0.5
CLTA-210ENST00000540080 GTF2H5Q6ZYL4 71 aa11.92□□□□□ -0.5
CLTA-210ENST00000540080 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
CLTA-210ENST00000540080 BPY2O14599 106 aa11.84□□□□□ -0.51
CLTA-210ENST00000540080 Q6ZVQ6 151 aa11.84□□□□□ -0.51
CLTA-210ENST00000540080 Q8N9P0 234 aaPredicted RBP11.83□□□□□ -0.52
CLTA-210ENST00000540080 K7EQZ3 153 aa11.82□□□□□ -0.52
CLTA-210ENST00000540080 F8W1H4 67 aa11.81□□□□□ -0.52
CLTA-210ENST00000540080 ZCCHC13Q8WW36 166 aaKnown RBP11.81□□□□□ -0.52
CLTA-210ENST00000540080 MMP24-AS1A0A0U1RRL7 71 aa11.79□□□□□ -0.52
CLTA-210ENST00000540080 LINC00846Q9NV44 126 aa11.77□□□□□ -0.53
CLTA-210ENST00000540080 M0R2T5 61 aa11.76□□□□□ -0.53
CLTA-210ENST00000540080 ETDBQ3ZM63 59 aa11.74□□□□□ -0.53
CLTA-210ENST00000540080 TMEM254Q8TBM7 123 aa11.74□□□□□ -0.53
CLTA-210ENST00000540080 hDV103S1A0JD37 113 aa11.73□□□□□ -0.53
CLTA-210ENST00000540080 Q8N9L7 120 aa11.73□□□□□ -0.53
CLTA-210ENST00000540080 MRPL34Q9BQ48 92 aaKnown RBP11.73□□□□□ -0.53
CLTA-210ENST00000540080 UBL5Q9BZL1 73 aa11.73□□□□□ -0.53
CLTA-210ENST00000540080 KRTAP9-6A0A140TA67 174 aa11.72□□□□□ -0.53
CLTA-210ENST00000540080 HRES1P13985 223 aa11.69□□□□□ -0.54
CLTA-210ENST00000540080 NDUFS5O43920 106 aa11.67□□□□□ -0.54
CLTA-210ENST00000540080 SPINK7P58062 85 aa11.67□□□□□ -0.54
CLTA-210ENST00000540080 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.54
CLTA-210ENST00000540080 FAM236CP0DP71 79 aa11.65□□□□□ -0.54
CLTA-210ENST00000540080 KRTAP10-6P60371 365 aaPredicted RBP11.65□□□□□ -0.54
CLTA-210ENST00000540080 WFDC13Q8IUB5 93 aa11.65□□□□□ -0.54
CLTA-210ENST00000540080 RBM12B-AS1Q9P1G2 102 aa11.65□□□□□ -0.54
CLTA-210ENST00000540080 FLGP20930 4061 aaPredicted RBP11.64□□□□□ -0.55
CLTA-210ENST00000540080 MPLKIPQ8TAP9 179 aa11.62□□□□□ -0.55
CLTA-210ENST00000540080 LORP23490 312 aaPredicted RBP11.61□□□□□ -0.55
CLTA-210ENST00000540080 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
CLTA-210ENST00000540080 HCG22E2RYF7 251 aa11.53□□□□□ -0.56
CLTA-210ENST00000540080 Q5W150 140 aa11.49□□□□□ -0.57
CLTA-210ENST00000540080 A0A1B0GV90 55 aa11.48□□□□□ -0.57
CLTA-210ENST00000540080 CXCL6P80162 114 aa11.48□□□□□ -0.57
CLTA-210ENST00000540080 LCE2DQ5TA82 110 aaPredicted RBP11.48□□□□□ -0.57
CLTA-210ENST00000540080 ACYP1P07311 99 aa11.44□□□□□ -0.58
CLTA-210ENST00000540080 IGKV2D-30A0A075B6S6 120 aa11.42□□□□□ -0.58
CLTA-210ENST00000540080 IGKV2-30P06310 120 aa11.42□□□□□ -0.58
CLTA-210ENST00000540080 FAM240AA0A1B0GVK7 77 aa11.38□□□□□ -0.59
CLTA-210ENST00000540080 C7orf65Q6ZTY9 151 aa11.36□□□□□ -0.59
CLTA-210ENST00000540080 KRTAP9-8Q9BYQ0 159 aa11.31□□□□□ -0.6
CLTA-210ENST00000540080 ATP5EP2Q5VTU8 51 aa11.27□□□□□ -0.61
CLTA-210ENST00000540080 TP53AIP1Q9HCN2 124 aa11.27□□□□□ -0.61
CLTA-210ENST00000540080 HIST1H4AP62805 103 aaKnown RBP11.24□□□□□ -0.61
CLTA-210ENST00000540080 H1FX-AS1Q4G0G2 97 aa11.22□□□□□ -0.61
CLTA-210ENST00000540080 FSIP2Q5CZC0 6907 aa11.21□□□□□ -0.62
CLTA-210ENST00000540080 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
CLTA-210ENST00000540080 LINC00643Q86TS7 51 aa11.19□□□□□ -0.62
CLTA-210ENST00000540080 MT2AP02795 61 aa11.18□□□□□ -0.62
CLTA-210ENST00000540080 CRCT1Q9UGL9 99 aa11.16□□□□□ -0.62
CLTA-210ENST00000540080 MT1FP04733 61 aa11.11□□□□□ -0.63
CLTA-210ENST00000540080 A0A087WVE0 104 aa11.1□□□□□ -0.63
CLTA-210ENST00000540080 KRTAP10-10P60014 251 aa11.09□□□□□ -0.63
CLTA-210ENST00000540080 J3QR89 54 aa11.08□□□□□ -0.64
CLTA-210ENST00000540080 TRAV22A0A0B4J277 110 aa11.06□□□□□ -0.64
CLTA-210ENST00000540080 C1orf64Q8NEQ6 169 aa11.02□□□□□ -0.65
CLTA-210ENST00000540080 KRTAP3-1Q9BYR8 98 aa11.02□□□□□ -0.65
CLTA-210ENST00000540080 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.65
CLTA-210ENST00000540080 UQCRQO14949 82 aa11.01□□□□□ -0.65
CLTA-210ENST00000540080 LOC101927531A0A1B0GV80 90 aa10.97□□□□□ -0.65
CLTA-210ENST00000540080 H0Y9P7 68 aa10.95□□□□□ -0.66
CLTA-210ENST00000540080 KRTAP9-3Q9BYQ3 159 aa10.95□□□□□ -0.66
CLTA-210ENST00000540080 ATOX1O00244 68 aa10.91□□□□□ -0.66
CLTA-210ENST00000540080 S4R3F8 94 aa10.89□□□□□ -0.67
CLTA-210ENST00000540080 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
CLTA-210ENST00000540080 LCE2BO14633 110 aa10.85□□□□□ -0.67
CLTA-210ENST00000540080 OCR1Q9BZK8 76 aa10.85□□□□□ -0.67
CLTA-210ENST00000540080 LCA10Q71F78 164 aa10.82□□□□□ -0.68
CLTA-210ENST00000540080 LINC00208Q96KT6 92 aa10.81□□□□□ -0.68
CLTA-210ENST00000540080 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
CLTA-210ENST00000540080 K7ERU9 68 aa10.77□□□□□ -0.69
CLTA-210ENST00000540080 MP68P56378 58 aa10.77□□□□□ -0.69
CLTA-210ENST00000540080 USH2AO75445 5202 aa10.76□□□□□ -0.69
CLTA-210ENST00000540080 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
CLTA-210ENST00000540080 KLKP1Q107X0 134 aa10.72□□□□□ -0.69
CLTA-210ENST00000540080 MT-ATP8P03928 68 aa10.7□□□□□ -0.7
CLTA-210ENST00000540080 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
CLTA-210ENST00000540080 IMUPQ9GZP8 106 aa10.68□□□□□ -0.7
CLTA-210ENST00000540080 FAM236AA0A1B0GUQ0 79 aa10.66□□□□□ -0.7
CLTA-210ENST00000540080 FAM236BA0A1B0GV22 79 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms