RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 IGHV6-1A0A0B4J1U7 121 aa9.45□□□□□ -0.9
DDX55-204ENST00000536079 LINC00313P59037 77 aa9.45□□□□□ -0.9
DDX55-204ENST00000536079 A0A1B0GW54 56 aa9.44□□□□□ -0.9
DDX55-204ENST00000536079 A8MUU9 505 aa9.44□□□□□ -0.9
DDX55-204ENST00000536079 C21orf62-AS1Q17RA5 79 aa9.43□□□□□ -0.9
DDX55-204ENST00000536079 A0A0U1RQV1 116 aa9.42□□□□□ -0.9
DDX55-204ENST00000536079 A0A1B0GVX0 72 aa9.42□□□□□ -0.9
DDX55-204ENST00000536079 KRTAP19-2Q3LHN2 52 aa9.41□□□□□ -0.9
DDX55-204ENST00000536079 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
DDX55-204ENST00000536079 J3KT08 172 aa9.39□□□□□ -0.91
DDX55-204ENST00000536079 GTF2H5Q6ZYL4 71 aa9.38□□□□□ -0.91
DDX55-204ENST00000536079 NREPQ16612 68 aa9.37□□□□□ -0.91
DDX55-204ENST00000536079 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
DDX55-204ENST00000536079 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
DDX55-204ENST00000536079 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
DDX55-204ENST00000536079 A8MWP4 228 aa9.35□□□□□ -0.91
DDX55-204ENST00000536079 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
DDX55-204ENST00000536079 F8W1H4 67 aa9.3□□□□□ -0.92
DDX55-204ENST00000536079 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
DDX55-204ENST00000536079 NDUFB1O75438 58 aa9.29□□□□□ -0.92
DDX55-204ENST00000536079 ETDBQ3ZM63 59 aa9.29□□□□□ -0.92
DDX55-204ENST00000536079 Q6ZVQ6 151 aa9.29□□□□□ -0.92
DDX55-204ENST00000536079 PRR15Q8IV56 129 aa9.28□□□□□ -0.92
DDX55-204ENST00000536079 LINC00846Q9NV44 126 aa9.27□□□□□ -0.93
DDX55-204ENST00000536079 K7EQZ3 153 aa9.25□□□□□ -0.93
DDX55-204ENST00000536079 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
DDX55-204ENST00000536079 BPY2O14599 106 aa9.23□□□□□ -0.93
DDX55-204ENST00000536079 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
DDX55-204ENST00000536079 Q8N9L7 120 aa9.21□□□□□ -0.94
DDX55-204ENST00000536079 MT1HP80294 61 aa9.2□□□□□ -0.94
DDX55-204ENST00000536079 A0A1B0GV90 55 aa9.19□□□□□ -0.94
DDX55-204ENST00000536079 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
DDX55-204ENST00000536079 FLGP20930 4061 aaPredicted RBP9.16□□□□□ -0.94
DDX55-204ENST00000536079 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
DDX55-204ENST00000536079 TMEM254Q8TBM7 123 aa9.14□□□□□ -0.95
DDX55-204ENST00000536079 hDV103S1A0JD37 113 aa9.13□□□□□ -0.95
DDX55-204ENST00000536079 MRPL34Q9BQ48 92 aaKnown RBP9.13□□□□□ -0.95
DDX55-204ENST00000536079 COX6B2Q6YFQ2 88 aa9.12□□□□□ -0.95
DDX55-204ENST00000536079 HRES1P13985 223 aa9.1□□□□□ -0.95
DDX55-204ENST00000536079 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
DDX55-204ENST00000536079 MPLKIPQ8TAP9 179 aa9.06□□□□□ -0.96
DDX55-204ENST00000536079 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
DDX55-204ENST00000536079 SPINK7P58062 85 aa9.04□□□□□ -0.96
DDX55-204ENST00000536079 NDUFS5O43920 106 aa9.03□□□□□ -0.96
DDX55-204ENST00000536079 Q5W150 140 aa9.02□□□□□ -0.97
DDX55-204ENST00000536079 HCG22E2RYF7 251 aa8.99□□□□□ -0.97
DDX55-204ENST00000536079 CXCL6P80162 114 aa8.99□□□□□ -0.97
DDX55-204ENST00000536079 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
DDX55-204ENST00000536079 ACYP1P07311 99 aa8.97□□□□□ -0.97
DDX55-204ENST00000536079 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
DDX55-204ENST00000536079 M0R2T5 61 aa8.95□□□□□ -0.98
DDX55-204ENST00000536079 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
DDX55-204ENST00000536079 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
DDX55-204ENST00000536079 FAM236DA0A1B0GTK5 79 aa8.92□□□□□ -0.98
DDX55-204ENST00000536079 FAM236CP0DP71 79 aa8.92□□□□□ -0.98
DDX55-204ENST00000536079 KRTAP9-2Q9BYQ4 174 aa8.89□□□□□ -0.99
DDX55-204ENST00000536079 IGKV2D-30A0A075B6S6 120 aa8.86□□□□□ -0.99
DDX55-204ENST00000536079 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
DDX55-204ENST00000536079 ATP5EP2Q5VTU8 51 aa8.83□□□□□ -1
DDX55-204ENST00000536079 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
DDX55-204ENST00000536079 LINC00643Q86TS7 51 aa8.8□□□□□ -1
DDX55-204ENST00000536079 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
DDX55-204ENST00000536079 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
DDX55-204ENST00000536079 A0A087WVE0 104 aa8.77□□□□□ -1.01
DDX55-204ENST00000536079 KRTAP9-8Q9BYQ0 159 aa8.77□□□□□ -1.01
DDX55-204ENST00000536079 TP53AIP1Q9HCN2 124 aa8.75□□□□□ -1.01
DDX55-204ENST00000536079 C4orf26Q17RF5 130 aa8.71□□□□□ -1.02
DDX55-204ENST00000536079 J3QR89 54 aa8.69□□□□□ -1.02
DDX55-204ENST00000536079 H1FX-AS1Q4G0G2 97 aa8.67□□□□□ -1.02
DDX55-204ENST00000536079 MT2AP02795 61 aa8.66□□□□□ -1.02
DDX55-204ENST00000536079 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.02
DDX55-204ENST00000536079 TRAV22A0A0B4J277 110 aa8.62□□□□□ -1.03
DDX55-204ENST00000536079 MT1FP04733 61 aa8.61□□□□□ -1.03
DDX55-204ENST00000536079 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
DDX55-204ENST00000536079 UQCRQO14949 82 aa8.6□□□□□ -1.03
DDX55-204ENST00000536079 H0Y9P7 68 aa8.56□□□□□ -1.04
DDX55-204ENST00000536079 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
DDX55-204ENST00000536079 OCR1Q9BZK8 76 aa8.55□□□□□ -1.04
DDX55-204ENST00000536079 LOC101927531A0A1B0GV80 90 aa8.54□□□□□ -1.04
DDX55-204ENST00000536079 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
DDX55-204ENST00000536079 FSIP2Q5CZC0 6907 aa8.52□□□□□ -1.05
DDX55-204ENST00000536079 K7ERU9 68 aa8.51□□□□□ -1.05
DDX55-204ENST00000536079 KRTAP10-10P60014 251 aa8.5□□□□□ -1.05
DDX55-204ENST00000536079 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
DDX55-204ENST00000536079 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
DDX55-204ENST00000536079 ATOX1O00244 68 aa8.47□□□□□ -1.05
DDX55-204ENST00000536079 LINC00208Q96KT6 92 aa8.45□□□□□ -1.06
DDX55-204ENST00000536079 USH2AO75445 5202 aa8.44□□□□□ -1.06
DDX55-204ENST00000536079 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
DDX55-204ENST00000536079 C5orf47Q569G3 176 aa8.43□□□□□ -1.06
DDX55-204ENST00000536079 CRCT1Q9UGL9 99 aa8.43□□□□□ -1.06
DDX55-204ENST00000536079 S4R3F8 94 aa8.43□□□□□ -1.06
DDX55-204ENST00000536079 LCA10Q71F78 164 aa8.42□□□□□ -1.06
DDX55-204ENST00000536079 IMUPQ9GZP8 106 aa8.41□□□□□ -1.06
DDX55-204ENST00000536079 LCE2BO14633 110 aa8.4□□□□□ -1.06
DDX55-204ENST00000536079 SCGB1A1P11684 91 aa8.4□□□□□ -1.06
DDX55-204ENST00000536079 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
DDX55-204ENST00000536079 MP68P56378 58 aa8.38□□□□□ -1.07
DDX55-204ENST00000536079 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
DDX55-204ENST00000536079 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms