RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CEND1Q8N111 149 aa6.3□□□□□ -1.4
TNFRSF1A-207ENST00000535958 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
TNFRSF1A-207ENST00000535958 PSMB2P49721 201 aa6.29□□□□□ -1.4
TNFRSF1A-207ENST00000535958 SPINK7P58062 85 aa6.29□□□□□ -1.4
TNFRSF1A-207ENST00000535958 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
TNFRSF1A-207ENST00000535958 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
TNFRSF1A-207ENST00000535958 S100A1P23297 94 aa6.28□□□□□ -1.4
TNFRSF1A-207ENST00000535958 LYRM7Q5U5X0 104 aa6.28□□□□□ -1.4
TNFRSF1A-207ENST00000535958 COX6CP09669 75 aa6.27□□□□□ -1.41
TNFRSF1A-207ENST00000535958 C2orf91Q6ZV80 131 aa6.26□□□□□ -1.41
TNFRSF1A-207ENST00000535958 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
TNFRSF1A-207ENST00000535958 VAMP8Q9BV40 100 aa6.26□□□□□ -1.41
TNFRSF1A-207ENST00000535958 J3KT08 172 aa6.25□□□□□ -1.41
TNFRSF1A-207ENST00000535958 NDUFB1O75438 58 aa6.24□□□□□ -1.41
TNFRSF1A-207ENST00000535958 FXYD2P54710 66 aa6.24□□□□□ -1.41
TNFRSF1A-207ENST00000535958 C21orf62-AS1Q17RA5 79 aa6.24□□□□□ -1.41
TNFRSF1A-207ENST00000535958 Q8N9P0 234 aaPredicted RBP6.24□□□□□ -1.41
TNFRSF1A-207ENST00000535958 DSCR8Q96T75 97 aa6.24□□□□□ -1.41
TNFRSF1A-207ENST00000535958 UBE2V1Q13404 147 aa6.23□□□□□ -1.41
TNFRSF1A-207ENST00000535958 RBM3P98179 157 aaKnown RBP6.21□□□□□ -1.42
TNFRSF1A-207ENST00000535958 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
TNFRSF1A-207ENST00000535958 K7ERJ3 54 aa6.18□□□□□ -1.42
TNFRSF1A-207ENST00000535958 C9JAW5 83 aa6.17□□□□□ -1.42
TNFRSF1A-207ENST00000535958 HSD52Q0P140 79 aa6.16□□□□□ -1.42
TNFRSF1A-207ENST00000535958 SCGB1C2P0DMR2 95 aa6.15□□□□□ -1.42
TNFRSF1A-207ENST00000535958 C8orf17Q9NRJ1 99 aa6.15□□□□□ -1.42
TNFRSF1A-207ENST00000535958 IGKV3D-7A0A0C4DH55 119 aa6.13□□□□□ -1.43
TNFRSF1A-207ENST00000535958 Q6ZQT0 140 aa6.13□□□□□ -1.43
TNFRSF1A-207ENST00000535958 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
TNFRSF1A-207ENST00000535958 Q6ZVQ6 151 aa6.11□□□□□ -1.43
TNFRSF1A-207ENST00000535958 BAALC-AS2P0C853 105 aa6.08□□□□□ -1.44
TNFRSF1A-207ENST00000535958 NDUFS5O43920 106 aa6.07□□□□□ -1.44
TNFRSF1A-207ENST00000535958 A0A1B0GW54 56 aa6.06□□□□□ -1.44
TNFRSF1A-207ENST00000535958 JMJD7-PLA2G4BH0Y9G9 81 aa6.05□□□□□ -1.44
TNFRSF1A-207ENST00000535958 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
TNFRSF1A-207ENST00000535958 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
TNFRSF1A-207ENST00000535958 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
TNFRSF1A-207ENST00000535958 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
TNFRSF1A-207ENST00000535958 PDE6GP18545 87 aa6.03□□□□□ -1.44
TNFRSF1A-207ENST00000535958 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
TNFRSF1A-207ENST00000535958 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
TNFRSF1A-207ENST00000535958 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
TNFRSF1A-207ENST00000535958 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
TNFRSF1A-207ENST00000535958 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
TNFRSF1A-207ENST00000535958 NREPQ16612 68 aa6.01□□□□□ -1.45
TNFRSF1A-207ENST00000535958 UQCR10Q9UDW1 63 aa6.01□□□□□ -1.45
TNFRSF1A-207ENST00000535958 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
TNFRSF1A-207ENST00000535958 A6NN06 94 aa6□□□□□ -1.45
TNFRSF1A-207ENST00000535958 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
TNFRSF1A-207ENST00000535958 hDV103S1A0JD37 113 aa5.99□□□□□ -1.45
TNFRSF1A-207ENST00000535958 PYY3Q5JQD4 70 aa5.98□□□□□ -1.45
TNFRSF1A-207ENST00000535958 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
TNFRSF1A-207ENST00000535958 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
TNFRSF1A-207ENST00000535958 C14orf132Q9NPU4 83 aa5.97□□□□□ -1.45
TNFRSF1A-207ENST00000535958 NEBP20929 6669 aa5.94□□□□□ -1.46
TNFRSF1A-207ENST00000535958 K7EQZ3 153 aa5.94□□□□□ -1.46
TNFRSF1A-207ENST00000535958 MUC12Q9UKN1 5478 aa5.93□□□□□ -1.46
TNFRSF1A-207ENST00000535958 Q5VV11 94 aa5.93□□□□□ -1.46
TNFRSF1A-207ENST00000535958 C5orf47Q569G3 176 aa5.92□□□□□ -1.46
TNFRSF1A-207ENST00000535958 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
TNFRSF1A-207ENST00000535958 C4orf26Q17RF5 130 aa5.9□□□□□ -1.46
TNFRSF1A-207ENST00000535958 NAA38Q9BRA0 125 aaKnown RBP5.89□□□□□ -1.47
TNFRSF1A-207ENST00000535958 BPY2O14599 106 aa5.88□□□□□ -1.47
TNFRSF1A-207ENST00000535958 M0R143 59 aa5.87□□□□□ -1.47
TNFRSF1A-207ENST00000535958 Q5W150 140 aa5.87□□□□□ -1.47
TNFRSF1A-207ENST00000535958 HCG22E2RYF7 251 aa5.86□□□□□ -1.47
TNFRSF1A-207ENST00000535958 S4R3F8 94 aa5.86□□□□□ -1.47
TNFRSF1A-207ENST00000535958 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
TNFRSF1A-207ENST00000535958 MT1BP07438 61 aa5.84□□□□□ -1.47
TNFRSF1A-207ENST00000535958 CSAG1Q6PB30 78 aa5.84□□□□□ -1.47
TNFRSF1A-207ENST00000535958 CXCL6P80162 114 aa5.83□□□□□ -1.48
TNFRSF1A-207ENST00000535958 IMUPQ9GZP8 106 aa5.82□□□□□ -1.48
TNFRSF1A-207ENST00000535958 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
TNFRSF1A-207ENST00000535958 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
TNFRSF1A-207ENST00000535958 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
TNFRSF1A-207ENST00000535958 TSTD3H0UI37 97 aa5.79□□□□□ -1.48
TNFRSF1A-207ENST00000535958 Q8N9L7 120 aa5.79□□□□□ -1.48
TNFRSF1A-207ENST00000535958 LCA10Q71F78 164 aa5.77□□□□□ -1.49
TNFRSF1A-207ENST00000535958 C1orf64Q8NEQ6 169 aa5.77□□□□□ -1.49
TNFRSF1A-207ENST00000535958 H3BT86 120 aa5.76□□□□□ -1.49
TNFRSF1A-207ENST00000535958 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
TNFRSF1A-207ENST00000535958 KLKP1Q107X0 134 aa5.76□□□□□ -1.49
TNFRSF1A-207ENST00000535958 TMA7Q9Y2S6 64 aaKnown RBP5.76□□□□□ -1.49
TNFRSF1A-207ENST00000535958 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
TNFRSF1A-207ENST00000535958 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
TNFRSF1A-207ENST00000535958 BATFQ16520 125 aa5.71□□□□□ -1.5
TNFRSF1A-207ENST00000535958 KMT2DO14686 5537 aa5.71□□□□□ -1.5
TNFRSF1A-207ENST00000535958 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
TNFRSF1A-207ENST00000535958 UBL5Q9BZL1 73 aa5.67□□□□□ -1.5
TNFRSF1A-207ENST00000535958 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
TNFRSF1A-207ENST00000535958 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
TNFRSF1A-207ENST00000535958 TP53AIP1Q9HCN2 124 aa5.64□□□□□ -1.51
TNFRSF1A-207ENST00000535958 A0A1W2PPM0 123 aa5.62□□□□□ -1.51
TNFRSF1A-207ENST00000535958 C9orf118A6NHY6 69 aa5.62□□□□□ -1.51
TNFRSF1A-207ENST00000535958 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
TNFRSF1A-207ENST00000535958 SPRR2EP22531 72 aa5.59□□□□□ -1.51
TNFRSF1A-207ENST00000535958 SPRR2BP35325 72 aa5.59□□□□□ -1.51
TNFRSF1A-207ENST00000535958 SPRR2AP35326 72 aa5.59□□□□□ -1.51
TNFRSF1A-207ENST00000535958 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.51
TNFRSF1A-207ENST00000535958 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms