RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 A8MUU9 505 aa12.02□□□□□ -0.49
SFSWAP-204ENST00000535399 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.49
SFSWAP-204ENST00000535399 K7EP34 96 aa12.01□□□□□ -0.49
SFSWAP-204ENST00000535399 KRTAP16-1A8MUX0 517 aa12□□□□□ -0.49
SFSWAP-204ENST00000535399 J3KT08 172 aa12□□□□□ -0.49
SFSWAP-204ENST00000535399 IGHV6-1A0A0B4J1U7 121 aa11.99□□□□□ -0.49
SFSWAP-204ENST00000535399 LCE2AQ5TA79 106 aaPredicted RBP11.99□□□□□ -0.49
SFSWAP-204ENST00000535399 ATP11AUNQ6ZP68 121 aa11.99□□□□□ -0.49
SFSWAP-204ENST00000535399 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
SFSWAP-204ENST00000535399 A0A1B0GVX0 72 aa11.98□□□□□ -0.49
SFSWAP-204ENST00000535399 C8orf87E5RJ46 101 aa11.94□□□□□ -0.5
SFSWAP-204ENST00000535399 KRTAP19-2Q3LHN2 52 aa11.93□□□□□ -0.5
SFSWAP-204ENST00000535399 NREPQ16612 68 aa11.91□□□□□ -0.5
SFSWAP-204ENST00000535399 LCE2CQ5TA81 110 aa11.9□□□□□ -0.5
SFSWAP-204ENST00000535399 A8MWP4 228 aa11.89□□□□□ -0.51
SFSWAP-204ENST00000535399 NDUFB1O75438 58 aa11.88□□□□□ -0.51
SFSWAP-204ENST00000535399 GTF2H5Q6ZYL4 71 aa11.88□□□□□ -0.51
SFSWAP-204ENST00000535399 IGKV3D-7A0A0C4DH55 119 aa11.86□□□□□ -0.51
SFSWAP-204ENST00000535399 PRR15Q8IV56 129 aa11.8□□□□□ -0.52
SFSWAP-204ENST00000535399 C8orf17Q9NRJ1 99 aa11.8□□□□□ -0.52
SFSWAP-204ENST00000535399 F8W1H4 67 aa11.78□□□□□ -0.52
SFSWAP-204ENST00000535399 Q6ZVQ6 151 aa11.76□□□□□ -0.53
SFSWAP-204ENST00000535399 Q8N9P0 234 aaPredicted RBP11.74□□□□□ -0.53
SFSWAP-204ENST00000535399 BPY2O14599 106 aa11.73□□□□□ -0.53
SFSWAP-204ENST00000535399 K7EQZ3 153 aa11.71□□□□□ -0.53
SFSWAP-204ENST00000535399 LINC00846Q9NV44 126 aa11.71□□□□□ -0.53
SFSWAP-204ENST00000535399 MT1HP80294 61 aa11.7□□□□□ -0.54
SFSWAP-204ENST00000535399 ETDBQ3ZM63 59 aa11.7□□□□□ -0.54
SFSWAP-204ENST00000535399 MMP24-AS1A0A0U1RRL7 71 aa11.69□□□□□ -0.54
SFSWAP-204ENST00000535399 COX6B2Q6YFQ2 88 aa11.67□□□□□ -0.54
SFSWAP-204ENST00000535399 ZCCHC13Q8WW36 166 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-204ENST00000535399 KRTAP9-2Q9BYQ4 174 aa11.66□□□□□ -0.54
SFSWAP-204ENST00000535399 UBL5Q9BZL1 73 aa11.64□□□□□ -0.55
SFSWAP-204ENST00000535399 TMEM254Q8TBM7 123 aa11.63□□□□□ -0.55
SFSWAP-204ENST00000535399 FLGP20930 4061 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-204ENST00000535399 hDV103S1A0JD37 113 aa11.61□□□□□ -0.55
SFSWAP-204ENST00000535399 Q8N9L7 120 aa11.61□□□□□ -0.55
SFSWAP-204ENST00000535399 MRPL34Q9BQ48 92 aaKnown RBP11.61□□□□□ -0.55
SFSWAP-204ENST00000535399 HRES1P13985 223 aa11.55□□□□□ -0.56
SFSWAP-204ENST00000535399 MPLKIPQ8TAP9 179 aa11.53□□□□□ -0.56
SFSWAP-204ENST00000535399 SPINK7P58062 85 aa11.5□□□□□ -0.57
SFSWAP-204ENST00000535399 WFDC13Q8IUB5 93 aa11.5□□□□□ -0.57
SFSWAP-204ENST00000535399 A0A1B0GV90 55 aa11.49□□□□□ -0.57
SFSWAP-204ENST00000535399 CASC2Q6XLA1 102 aa11.49□□□□□ -0.57
SFSWAP-204ENST00000535399 KRTAP9-6A0A140TA67 174 aa11.48□□□□□ -0.57
SFSWAP-204ENST00000535399 NDUFS5O43920 106 aa11.47□□□□□ -0.57
SFSWAP-204ENST00000535399 M0R2T5 61 aa11.46□□□□□ -0.57
SFSWAP-204ENST00000535399 RBM12B-AS1Q9P1G2 102 aa11.44□□□□□ -0.58
SFSWAP-204ENST00000535399 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-204ENST00000535399 CXCL6P80162 114 aa11.43□□□□□ -0.58
SFSWAP-204ENST00000535399 HCG22E2RYF7 251 aa11.41□□□□□ -0.58
SFSWAP-204ENST00000535399 LORP23490 312 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-204ENST00000535399 FAM236DA0A1B0GTK5 79 aa11.4□□□□□ -0.58
SFSWAP-204ENST00000535399 ACYP1P07311 99 aa11.4□□□□□ -0.58
SFSWAP-204ENST00000535399 FAM236CP0DP71 79 aa11.4□□□□□ -0.58
SFSWAP-204ENST00000535399 FAM240AA0A1B0GVK7 77 aa11.39□□□□□ -0.59
SFSWAP-204ENST00000535399 Q5W150 140 aa11.39□□□□□ -0.59
SFSWAP-204ENST00000535399 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
SFSWAP-204ENST00000535399 IGKV2D-30A0A075B6S6 120 aa11.25□□□□□ -0.61
SFSWAP-204ENST00000535399 IGKV2-30P06310 120 aa11.25□□□□□ -0.61
SFSWAP-204ENST00000535399 ATP5EP2Q5VTU8 51 aa11.24□□□□□ -0.61
SFSWAP-204ENST00000535399 C7orf65Q6ZTY9 151 aa11.24□□□□□ -0.61
SFSWAP-204ENST00000535399 TP53AIP1Q9HCN2 124 aa11.17□□□□□ -0.62
SFSWAP-204ENST00000535399 LINC00643Q86TS7 51 aa11.16□□□□□ -0.62
SFSWAP-204ENST00000535399 KRTAP9-8Q9BYQ0 159 aa11.14□□□□□ -0.63
SFSWAP-204ENST00000535399 HIST1H4AP62805 103 aaKnown RBP11.12□□□□□ -0.63
SFSWAP-204ENST00000535399 J3QR89 54 aa11.06□□□□□ -0.64
SFSWAP-204ENST00000535399 H1FX-AS1Q4G0G2 97 aa11.06□□□□□ -0.64
SFSWAP-204ENST00000535399 C4orf26Q17RF5 130 aa11.04□□□□□ -0.64
SFSWAP-204ENST00000535399 A0A087WVE0 104 aa11.03□□□□□ -0.64
SFSWAP-204ENST00000535399 MT2AP02795 61 aa11.01□□□□□ -0.65
SFSWAP-204ENST00000535399 TRAV22A0A0B4J277 110 aa10.97□□□□□ -0.65
SFSWAP-204ENST00000535399 UQCRQO14949 82 aa10.94□□□□□ -0.66
SFSWAP-204ENST00000535399 MT1FP04733 61 aa10.93□□□□□ -0.66
SFSWAP-204ENST00000535399 CRCT1Q9UGL9 99 aa10.93□□□□□ -0.66
SFSWAP-204ENST00000535399 KRTAP3-1Q9BYR8 98 aa10.92□□□□□ -0.66
SFSWAP-204ENST00000535399 CYP4F30PQ9H0H9 118 aa10.92□□□□□ -0.66
SFSWAP-204ENST00000535399 FSIP2Q5CZC0 6907 aa10.91□□□□□ -0.66
SFSWAP-204ENST00000535399 LOC101927531A0A1B0GV80 90 aa10.88□□□□□ -0.67
SFSWAP-204ENST00000535399 C1orf64Q8NEQ6 169 aa10.87□□□□□ -0.67
SFSWAP-204ENST00000535399 H0Y9P7 68 aa10.85□□□□□ -0.67
SFSWAP-204ENST00000535399 KRTAP10-10P60014 251 aa10.85□□□□□ -0.67
SFSWAP-204ENST00000535399 ATOX1O00244 68 aa10.83□□□□□ -0.68
SFSWAP-204ENST00000535399 OCR1Q9BZK8 76 aa10.82□□□□□ -0.68
SFSWAP-204ENST00000535399 K7ERU9 68 aa10.78□□□□□ -0.68
SFSWAP-204ENST00000535399 KRTAP9-3Q9BYQ3 159 aa10.78□□□□□ -0.68
SFSWAP-204ENST00000535399 S4R3F8 94 aa10.73□□□□□ -0.69
SFSWAP-204ENST00000535399 LINC00208Q96KT6 92 aa10.71□□□□□ -0.69
SFSWAP-204ENST00000535399 MT-ATP8P03928 68 aa10.7□□□□□ -0.7
SFSWAP-204ENST00000535399 C5orf47Q569G3 176 aa10.7□□□□□ -0.7
SFSWAP-204ENST00000535399 USH2AO75445 5202 aa10.7□□□□□ -0.7
SFSWAP-204ENST00000535399 IMUPQ9GZP8 106 aa10.69□□□□□ -0.7
SFSWAP-204ENST00000535399 MP68P56378 58 aa10.68□□□□□ -0.7
SFSWAP-204ENST00000535399 LCA10Q71F78 164 aa10.68□□□□□ -0.7
SFSWAP-204ENST00000535399 LCE2BO14633 110 aa10.66□□□□□ -0.7
SFSWAP-204ENST00000535399 SCGB1A1P11684 91 aa10.66□□□□□ -0.7
SFSWAP-204ENST00000535399 KLKP1Q107X0 134 aa10.63□□□□□ -0.71
SFSWAP-204ENST00000535399 CSAG1Q6PB30 78 aa10.61□□□□□ -0.71
SFSWAP-204ENST00000535399 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
SFSWAP-204ENST00000535399 H3BPC8 53 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms