RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 TSTD3H0UI37 97 aa5.05□□□□□ -1.6
CLSTN3-203ENST00000534830 CCKP06307 115 aa5.05□□□□□ -1.6
CLSTN3-203ENST00000534830 TRACP01848 142 aa5.04□□□□□ -1.6
CLSTN3-203ENST00000534830 MT2AP02795 61 aa5.04□□□□□ -1.6
CLSTN3-203ENST00000534830 HRES1P13985 223 aa5.04□□□□□ -1.6
CLSTN3-203ENST00000534830 DEFB116Q30KQ4 102 aa5.04□□□□□ -1.6
CLSTN3-203ENST00000534830 NEBP20929 6669 aa5.02□□□□□ -1.61
CLSTN3-203ENST00000534830 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
CLSTN3-203ENST00000534830 IGHV6-1A0A0B4J1U7 121 aa5.01□□□□□ -1.61
CLSTN3-203ENST00000534830 MT1FP04733 61 aa5.01□□□□□ -1.61
CLSTN3-203ENST00000534830 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
CLSTN3-203ENST00000534830 RBM3P98179 157 aaKnown RBP5.01□□□□□ -1.61
CLSTN3-203ENST00000534830 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
CLSTN3-203ENST00000534830 A0A1B0GVX0 72 aa5□□□□□ -1.61
CLSTN3-203ENST00000534830 C8orf87E5RJ46 101 aa5□□□□□ -1.61
CLSTN3-203ENST00000534830 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
CLSTN3-203ENST00000534830 PCP4L1A6NKN8 68 aa4.98□□□□□ -1.61
CLSTN3-203ENST00000534830 SCGB1C2P0DMR2 95 aa4.98□□□□□ -1.61
CLSTN3-203ENST00000534830 BATFQ16520 125 aa4.98□□□□□ -1.61
CLSTN3-203ENST00000534830 DSCR8Q96T75 97 aa4.98□□□□□ -1.61
CLSTN3-203ENST00000534830 RBM12B-AS1Q9P1G2 102 aa4.98□□□□□ -1.61
CLSTN3-203ENST00000534830 M0R143 59 aa4.97□□□□□ -1.61
CLSTN3-203ENST00000534830 BAALC-AS2P0C853 105 aa4.97□□□□□ -1.61
CLSTN3-203ENST00000534830 FAM236DA0A1B0GTK5 79 aa4.96□□□□□ -1.62
CLSTN3-203ENST00000534830 FAM236CP0DP71 79 aa4.96□□□□□ -1.62
CLSTN3-203ENST00000534830 C21orf62-AS1Q17RA5 79 aa4.96□□□□□ -1.62
CLSTN3-203ENST00000534830 Q6ZQT0 140 aa4.96□□□□□ -1.62
CLSTN3-203ENST00000534830 VPS25Q9BRG1 176 aa4.96□□□□□ -1.62
CLSTN3-203ENST00000534830 C9JAW5 83 aa4.95□□□□□ -1.62
CLSTN3-203ENST00000534830 J3KT08 172 aa4.95□□□□□ -1.62
CLSTN3-203ENST00000534830 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
CLSTN3-203ENST00000534830 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
CLSTN3-203ENST00000534830 NAA38Q9BRA0 125 aaKnown RBP4.95□□□□□ -1.62
CLSTN3-203ENST00000534830 A0A1B0GW54 56 aa4.93□□□□□ -1.62
CLSTN3-203ENST00000534830 TAX1BP3O14907 124 aa4.92□□□□□ -1.62
CLSTN3-203ENST00000534830 LOC110117498A0A087WWA1 95 aa4.91□□□□□ -1.62
CLSTN3-203ENST00000534830 JMJD7-PLA2G4BH0Y9G9 81 aa4.91□□□□□ -1.62
CLSTN3-203ENST00000534830 SPINK7P58062 85 aa4.91□□□□□ -1.62
CLSTN3-203ENST00000534830 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.62
CLSTN3-203ENST00000534830 A8MWP4 228 aa4.9□□□□□ -1.63
CLSTN3-203ENST00000534830 ATXN8Q156A1 80 aa4.9□□□□□ -1.63
CLSTN3-203ENST00000534830 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
CLSTN3-203ENST00000534830 IGKV3D-7A0A0C4DH55 119 aa4.89□□□□□ -1.63
CLSTN3-203ENST00000534830 NDUFB1O75438 58 aa4.89□□□□□ -1.63
CLSTN3-203ENST00000534830 MTURNQ8N3F0 131 aa4.89□□□□□ -1.63
CLSTN3-203ENST00000534830 C9orf118A6NHY6 69 aa4.88□□□□□ -1.63
CLSTN3-203ENST00000534830 PDE6GP18545 87 aa4.88□□□□□ -1.63
CLSTN3-203ENST00000534830 COL5A1-AS1Q5SY13 56 aa4.86□□□□□ -1.63
CLSTN3-203ENST00000534830 Q6ZVQ6 151 aa4.86□□□□□ -1.63
CLSTN3-203ENST00000534830 C14orf132Q9NPU4 83 aa4.86□□□□□ -1.63
CLSTN3-203ENST00000534830 A0A1W2PPM0 123 aa4.85□□□□□ -1.63
CLSTN3-203ENST00000534830 PRR15Q8IV56 129 aa4.85□□□□□ -1.63
CLSTN3-203ENST00000534830 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
CLSTN3-203ENST00000534830 NREPQ16612 68 aa4.82□□□□□ -1.64
CLSTN3-203ENST00000534830 WFDC13Q8IUB5 93 aa4.82□□□□□ -1.64
CLSTN3-203ENST00000534830 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
CLSTN3-203ENST00000534830 MRPL34Q9BQ48 92 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-203ENST00000534830 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
CLSTN3-203ENST00000534830 SPCS1Q9Y6A9 102 aa4.79□□□□□ -1.64
CLSTN3-203ENST00000534830 hDV103S1A0JD37 113 aa4.78□□□□□ -1.64
CLSTN3-203ENST00000534830 K7EQZ3 153 aa4.78□□□□□ -1.64
CLSTN3-203ENST00000534830 H3BT86 120 aa4.77□□□□□ -1.65
CLSTN3-203ENST00000534830 K7EP34 96 aa4.77□□□□□ -1.65
CLSTN3-203ENST00000534830 SMCPP49901 116 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-203ENST00000534830 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
CLSTN3-203ENST00000534830 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
CLSTN3-203ENST00000534830 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
CLSTN3-203ENST00000534830 PRO0461Q9UI25 63 aa4.75□□□□□ -1.65
CLSTN3-203ENST00000534830 Q5W150 140 aa4.74□□□□□ -1.65
CLSTN3-203ENST00000534830 A0A1B0GV90 55 aa4.73□□□□□ -1.65
CLSTN3-203ENST00000534830 BPY2O14599 106 aa4.72□□□□□ -1.65
CLSTN3-203ENST00000534830 NDUFS5O43920 106 aa4.71□□□□□ -1.66
CLSTN3-203ENST00000534830 C7orf65Q6ZTY9 151 aa4.7□□□□□ -1.66
CLSTN3-203ENST00000534830 GTF2H5Q6ZYL4 71 aa4.7□□□□□ -1.66
CLSTN3-203ENST00000534830 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
CLSTN3-203ENST00000534830 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
CLSTN3-203ENST00000534830 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
CLSTN3-203ENST00000534830 CASC2Q6XLA1 102 aa4.67□□□□□ -1.66
CLSTN3-203ENST00000534830 Q8N9L7 120 aa4.67□□□□□ -1.66
CLSTN3-203ENST00000534830 HCG22E2RYF7 251 aa4.66□□□□□ -1.66
CLSTN3-203ENST00000534830 KMT2DO14686 5537 aa4.66□□□□□ -1.66
CLSTN3-203ENST00000534830 F8W1H4 67 aa4.65□□□□□ -1.67
CLSTN3-203ENST00000534830 CXCL6P80162 114 aa4.64□□□□□ -1.67
CLSTN3-203ENST00000534830 ETDBQ3ZM63 59 aa4.64□□□□□ -1.67
CLSTN3-203ENST00000534830 A6NN06 94 aa4.63□□□□□ -1.67
CLSTN3-203ENST00000534830 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
CLSTN3-203ENST00000534830 C4orf26Q17RF5 130 aa4.63□□□□□ -1.67
CLSTN3-203ENST00000534830 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
CLSTN3-203ENST00000534830 UBL5Q9BZL1 73 aa4.59□□□□□ -1.67
CLSTN3-203ENST00000534830 C5orf47Q569G3 176 aa4.56□□□□□ -1.68
CLSTN3-203ENST00000534830 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
CLSTN3-203ENST00000534830 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
CLSTN3-203ENST00000534830 MT1BP07438 61 aa4.55□□□□□ -1.68
CLSTN3-203ENST00000534830 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
CLSTN3-203ENST00000534830 S4R3F8 94 aa4.55□□□□□ -1.68
CLSTN3-203ENST00000534830 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
CLSTN3-203ENST00000534830 KRTAP19-8Q3LI54 63 aa4.54□□□□□ -1.68
CLSTN3-203ENST00000534830 LCA10Q71F78 164 aa4.54□□□□□ -1.68
CLSTN3-203ENST00000534830 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
CLSTN3-203ENST00000534830 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms