RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 Q6Q795 121 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 SOSTDC1Q6X4U4 206 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 LINC00643Q86TS7 51 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 C3orf22Q8N5N4 141 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 SMIM11BQ8TCY0 68 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 SMCR5Q8TEV8 140 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 CAMK2N2Q96S95 79 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 ORMDL1Q9P0S3 153 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 LAMTOR3Q9UHA4 124 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 TRAV23DV6A0A075B6W5 121 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 A0A087WVE0 104 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 TRBV7-7A0A0K0K1E9 115 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 FAM240AA0A1B0GVK7 77 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 ATOX1O00244 68 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 C9orf129Q5T035 196 aaKnown RBP1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 Q6JHZ5 121 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 UNQ6190/PRO20217Q6UXQ8 127 aa1.62□□□□□ -2.15
CHMP4A-208ENST00000534106 IGLV8-61A0A075B6I0 122 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 UQCRQO14949 82 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 COX7CP15954 63 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 CXCL5P42830 114 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 CXCL6P80162 114 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 SPAG11BQ08648 103 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 CDC42SE2Q9NRR3 84 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 C6orf48Q9UBA6 75 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 C22orf24Q9Y442 160 aa1.61□□□□□ -2.15
CHMP4A-208ENST00000534106 H0YGX0 51 aa1.6□□□□□ -2.15
CHMP4A-208ENST00000534106 RPL28P46779 137 aaKnown RBP1.6□□□□□ -2.15
CHMP4A-208ENST00000534106 FAM104AQ969W3 186 aa1.6□□□□□ -2.15
CHMP4A-208ENST00000534106 DSCR8Q96T75 97 aa1.6□□□□□ -2.15
CHMP4A-208ENST00000534106 UBL5Q9BZL1 73 aa1.6□□□□□ -2.15
CHMP4A-208ENST00000534106 PKIGQ9Y2B9 76 aa1.6□□□□□ -2.15
CHMP4A-208ENST00000534106 CSDC2Q9Y534 153 aaKnown RBP1.6□□□□□ -2.15
CHMP4A-208ENST00000534106 IGKV2-28A0A075B6P5 120 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 FAM236DA0A1B0GTK5 79 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 IGKV2D-28P01615 120 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 CCKP06307 115 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 FAM236CP0DP71 79 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 TMEM258P61165 79 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 KRTAP20-1Q3LI63 56 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 C6orf99Q4VX62 202 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 HRCT1Q6UXD1 115 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 COX6B2Q6YFQ2 88 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 FAM19A1Q7Z5A9 133 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 LINC01561Q8N1V8 128 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 C20orf197Q8N268 126 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 SERP2Q8N6R1 65 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 DEFB105AQ8NG35 78 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 IMUPQ9GZP8 106 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 LINC00846Q9NV44 126 aa1.59□□□□□ -2.15
CHMP4A-208ENST00000534106 JMJD7-PLA2G4BH0Y9G9 81 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 BCE1O60756 84 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 COX7BP24311 80 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 RBM3P98179 157 aaKnown RBP1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 C5orf47Q569G3 176 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 ATP5EP2Q5VTU8 51 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 FP248Q71RG6 208 aaPredicted RBP1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 KRTAP13-1Q8IUC0 172 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 Q8IZM0 81 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 LINC00167Q96N53 147 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 XAGE1AQ9HD64 81 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 SNURFQ9Y675 71 aa1.58□□□□□ -2.16
CHMP4A-208ENST00000534106 IGHV3OR16-9A0A0B4J2B5 98 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 F8WEM9 126 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 TMEM256-PLSCR3K7ERE1 68 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 TLX1NBP0CAT3 122 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 UBE2AP49459 152 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 PRLHP81277 87 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 KIAA0087Q14695 138 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 FAM229BQ4G0N7 80 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 Q6ZQY7 126 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 FAM19A3Q7Z5A8 133 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 NKAPP1Q8N9T2 125 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 CYSTM1Q9H1C7 97 aa1.57□□□□□ -2.16
CHMP4A-208ENST00000534106 TRAV7A0A075B6U4 112 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 TRBV10-3A0A0K0K1G6 114 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 C9orf92A6NGG3 77 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 BPY2O14599 106 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 NDUFC2O95298 119 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 MT2AP02795 61 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 NREPQ16612 68 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 C4orf26Q17RF5 130 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 LINC00575Q6W349 94 aa1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 MRPL55Q7Z7F7 128 aaKnown RBP1.56□□□□□ -2.16
CHMP4A-208ENST00000534106 ETDCA0A1B0GVM5 59 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 NDUFC2-KCTD14E9PQ53 114 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 MT1FP04733 61 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 COX17Q14061 63 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 SPAG11AQ6PDA7 123 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 Q6ZQT0 140 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 Q8N9L7 120 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 Q8NDZ9 215 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 BRK1Q8WUW1 75 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 SERP1Q9Y6X1 66 aa1.55□□□□□ -2.16
CHMP4A-208ENST00000534106 LOC110117498A0A087WWA1 95 aa1.54□□□□□ -2.16
CHMP4A-208ENST00000534106 M0R378 163 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms