RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MT2AP02795 61 aa4.8□□□□□ -1.64
SSBP3-215ENST00000533946 A0A1B0GVX0 72 aa4.79□□□□□ -1.64
SSBP3-215ENST00000533946 GHRHP01286 108 aa4.79□□□□□ -1.64
SSBP3-215ENST00000533946 Q6ZQT0 140 aa4.79□□□□□ -1.64
SSBP3-215ENST00000533946 MT1FP04733 61 aa4.78□□□□□ -1.64
SSBP3-215ENST00000533946 MTURNQ8N3F0 131 aa4.78□□□□□ -1.64
SSBP3-215ENST00000533946 C9JAW5 83 aa4.77□□□□□ -1.65
SSBP3-215ENST00000533946 DSCR8Q96T75 97 aa4.77□□□□□ -1.65
SSBP3-215ENST00000533946 C14orf132Q9NPU4 83 aa4.77□□□□□ -1.65
SSBP3-215ENST00000533946 IGKV3D-7A0A0C4DH55 119 aa4.76□□□□□ -1.65
SSBP3-215ENST00000533946 LOC105371267A0A1B0GV96 52 aa4.76□□□□□ -1.65
SSBP3-215ENST00000533946 H3BQ85 93 aa4.76□□□□□ -1.65
SSBP3-215ENST00000533946 BATFQ16520 125 aa4.76□□□□□ -1.65
SSBP3-215ENST00000533946 ATXN8Q156A1 80 aa4.75□□□□□ -1.65
SSBP3-215ENST00000533946 TRBV20-1A0A075B6N2 111 aa4.74□□□□□ -1.65
SSBP3-215ENST00000533946 LOC110117498A0A087WWA1 95 aa4.73□□□□□ -1.65
SSBP3-215ENST00000533946 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
SSBP3-215ENST00000533946 M0R143 59 aa4.73□□□□□ -1.65
SSBP3-215ENST00000533946 SMIM6P0DI80 62 aa4.73□□□□□ -1.65
SSBP3-215ENST00000533946 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
SSBP3-215ENST00000533946 ZCCHC13Q8WW36 166 aaKnown RBP4.73□□□□□ -1.65
SSBP3-215ENST00000533946 C8orf17Q9NRJ1 99 aa4.73□□□□□ -1.65
SSBP3-215ENST00000533946 C8orf87E5RJ46 101 aa4.72□□□□□ -1.65
SSBP3-215ENST00000533946 TAX1BP3O14907 124 aa4.72□□□□□ -1.65
SSBP3-215ENST00000533946 SPINK7P58062 85 aa4.72□□□□□ -1.65
SSBP3-215ENST00000533946 Q8N9P0 234 aaPredicted RBP4.72□□□□□ -1.65
SSBP3-215ENST00000533946 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
SSBP3-215ENST00000533946 A8MWP4 228 aa4.7□□□□□ -1.66
SSBP3-215ENST00000533946 FCGBPQ9Y6R7 5405 aaPredicted RBP4.69□□□□□ -1.66
SSBP3-215ENST00000533946 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
SSBP3-215ENST00000533946 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
SSBP3-215ENST00000533946 JMJD7-PLA2G4BH0Y9G9 81 aa4.67□□□□□ -1.66
SSBP3-215ENST00000533946 J3KT08 172 aa4.67□□□□□ -1.66
SSBP3-215ENST00000533946 K7EQZ3 153 aa4.67□□□□□ -1.66
SSBP3-215ENST00000533946 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
SSBP3-215ENST00000533946 PRR15Q8IV56 129 aa4.67□□□□□ -1.66
SSBP3-215ENST00000533946 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
SSBP3-215ENST00000533946 A0A1W2PPM0 123 aa4.66□□□□□ -1.66
SSBP3-215ENST00000533946 Q5W150 140 aa4.66□□□□□ -1.66
SSBP3-215ENST00000533946 Q6ZVQ6 151 aa4.66□□□□□ -1.66
SSBP3-215ENST00000533946 Q8N9L7 120 aa4.66□□□□□ -1.66
SSBP3-215ENST00000533946 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.67
SSBP3-215ENST00000533946 TSTD3H0UI37 97 aa4.64□□□□□ -1.67
SSBP3-215ENST00000533946 NDUFB1O75438 58 aa4.64□□□□□ -1.67
SSBP3-215ENST00000533946 NREPQ16612 68 aa4.64□□□□□ -1.67
SSBP3-215ENST00000533946 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
SSBP3-215ENST00000533946 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
SSBP3-215ENST00000533946 BPY2O14599 106 aa4.61□□□□□ -1.67
SSBP3-215ENST00000533946 LYRM7Q5U5X0 104 aa4.61□□□□□ -1.67
SSBP3-215ENST00000533946 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
SSBP3-215ENST00000533946 H3BT86 120 aa4.6□□□□□ -1.67
SSBP3-215ENST00000533946 PDE6GP18545 87 aa4.6□□□□□ -1.67
SSBP3-215ENST00000533946 TMEM254Q8TBM7 123 aa4.6□□□□□ -1.67
SSBP3-215ENST00000533946 hDV103S1A0JD37 113 aa4.59□□□□□ -1.67
SSBP3-215ENST00000533946 PRO0461Q9UI25 63 aa4.59□□□□□ -1.67
SSBP3-215ENST00000533946 A0A1B0GW54 56 aa4.58□□□□□ -1.68
SSBP3-215ENST00000533946 SPCS1Q9Y6A9 102 aa4.58□□□□□ -1.68
SSBP3-215ENST00000533946 NDUFS5O43920 106 aa4.57□□□□□ -1.68
SSBP3-215ENST00000533946 C21orf62-AS1Q17RA5 79 aa4.57□□□□□ -1.68
SSBP3-215ENST00000533946 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
SSBP3-215ENST00000533946 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
SSBP3-215ENST00000533946 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
SSBP3-215ENST00000533946 LINC00846Q9NV44 126 aa4.55□□□□□ -1.68
SSBP3-215ENST00000533946 HCG22E2RYF7 251 aa4.53□□□□□ -1.68
SSBP3-215ENST00000533946 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
SSBP3-215ENST00000533946 C4orf26Q17RF5 130 aa4.52□□□□□ -1.69
SSBP3-215ENST00000533946 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
SSBP3-215ENST00000533946 CASC2Q6XLA1 102 aa4.51□□□□□ -1.69
SSBP3-215ENST00000533946 K7EP34 96 aa4.5□□□□□ -1.69
SSBP3-215ENST00000533946 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
SSBP3-215ENST00000533946 COL5A1-AS1Q5SY13 56 aa4.48□□□□□ -1.69
SSBP3-215ENST00000533946 MACF1Q9UPN3 7388 aaKnown RBP4.46□□□□□ -1.7
SSBP3-215ENST00000533946 PCP4L1A6NKN8 68 aa4.46□□□□□ -1.7
SSBP3-215ENST00000533946 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
SSBP3-215ENST00000533946 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
SSBP3-215ENST00000533946 A0A087WVE0 104 aa4.43□□□□□ -1.7
SSBP3-215ENST00000533946 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
SSBP3-215ENST00000533946 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
SSBP3-215ENST00000533946 CXCL6P80162 114 aa4.41□□□□□ -1.7
SSBP3-215ENST00000533946 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
SSBP3-215ENST00000533946 LCA10Q71F78 164 aa4.39□□□□□ -1.71
SSBP3-215ENST00000533946 MT1BP07438 61 aa4.38□□□□□ -1.71
SSBP3-215ENST00000533946 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
SSBP3-215ENST00000533946 F8W1H4 67 aa4.35□□□□□ -1.71
SSBP3-215ENST00000533946 S4R3F8 94 aa4.35□□□□□ -1.71
SSBP3-215ENST00000533946 GTF2H5Q6ZYL4 71 aa4.34□□□□□ -1.71
SSBP3-215ENST00000533946 CYP4F30PQ9H0H9 118 aa4.33□□□□□ -1.72
SSBP3-215ENST00000533946 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
SSBP3-215ENST00000533946 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
SSBP3-215ENST00000533946 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
SSBP3-215ENST00000533946 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
SSBP3-215ENST00000533946 CSAG1Q6PB30 78 aa4.28□□□□□ -1.72
SSBP3-215ENST00000533946 TP53AIP1Q9HCN2 124 aa4.28□□□□□ -1.72
SSBP3-215ENST00000533946 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
SSBP3-215ENST00000533946 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
SSBP3-215ENST00000533946 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
SSBP3-215ENST00000533946 HIST1H4AP62805 103 aaKnown RBP4.24□□□□□ -1.73
SSBP3-215ENST00000533946 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
SSBP3-215ENST00000533946 A0A1B0GV90 55 aa4.23□□□□□ -1.73
SSBP3-215ENST00000533946 KLKP1Q107X0 134 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms