RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 A0A1B0GVX0 72 aa9.52□□□□□ -0.89
NXF1-216ENST00000533499 BPY2O14599 106 aa9.52□□□□□ -0.89
NXF1-216ENST00000533499 LINC00313P59037 77 aa9.51□□□□□ -0.89
NXF1-216ENST00000533499 A8MWP4 228 aa9.5□□□□□ -0.89
NXF1-216ENST00000533499 UBR4Q5T4S7 5183 aa9.48□□□□□ -0.89
NXF1-216ENST00000533499 IGKV3D-7A0A0C4DH55 119 aa9.47□□□□□ -0.89
NXF1-216ENST00000533499 NOTCH2NLQ7Z3S9 236 aa9.47□□□□□ -0.89
NXF1-216ENST00000533499 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
NXF1-216ENST00000533499 ACYP1P07311 99 aa9.45□□□□□ -0.9
NXF1-216ENST00000533499 SEC61BP60468 96 aaKnown RBP9.45□□□□□ -0.9
NXF1-216ENST00000533499 K7EQZ3 153 aa9.43□□□□□ -0.9
NXF1-216ENST00000533499 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
NXF1-216ENST00000533499 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
NXF1-216ENST00000533499 Q8N9L7 120 aa9.42□□□□□ -0.9
NXF1-216ENST00000533499 C8orf17Q9NRJ1 99 aa9.41□□□□□ -0.9
NXF1-216ENST00000533499 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.9
NXF1-216ENST00000533499 J3QR89 54 aa9.4□□□□□ -0.9
NXF1-216ENST00000533499 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
NXF1-216ENST00000533499 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
NXF1-216ENST00000533499 Q75L30 129 aa9.37□□□□□ -0.91
NXF1-216ENST00000533499 ATP11AUNQ6ZP68 121 aa9.36□□□□□ -0.91
NXF1-216ENST00000533499 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
NXF1-216ENST00000533499 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
NXF1-216ENST00000533499 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
NXF1-216ENST00000533499 A8MUU9 505 aa9.34□□□□□ -0.91
NXF1-216ENST00000533499 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
NXF1-216ENST00000533499 WFDC13Q8IUB5 93 aa9.33□□□□□ -0.92
NXF1-216ENST00000533499 CXCL6P80162 114 aa9.32□□□□□ -0.92
NXF1-216ENST00000533499 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
NXF1-216ENST00000533499 NDUFS5O43920 106 aa9.29□□□□□ -0.92
NXF1-216ENST00000533499 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
NXF1-216ENST00000533499 CASC2Q6XLA1 102 aa9.28□□□□□ -0.92
NXF1-216ENST00000533499 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
NXF1-216ENST00000533499 LINC00643Q86TS7 51 aa9.27□□□□□ -0.93
NXF1-216ENST00000533499 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
NXF1-216ENST00000533499 HCG22E2RYF7 251 aa9.25□□□□□ -0.93
NXF1-216ENST00000533499 K7ERU9 68 aa9.25□□□□□ -0.93
NXF1-216ENST00000533499 HIST1H4AP62805 103 aaKnown RBP9.25□□□□□ -0.93
NXF1-216ENST00000533499 Q8N9P0 234 aaPredicted RBP9.23□□□□□ -0.93
NXF1-216ENST00000533499 KRTAP4-1Q9BYQ7 146 aa9.23□□□□□ -0.93
NXF1-216ENST00000533499 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
NXF1-216ENST00000533499 A0A087WVE0 104 aa9.13□□□□□ -0.95
NXF1-216ENST00000533499 MUC2Q02817 5179 aa9.13□□□□□ -0.95
NXF1-216ENST00000533499 A0A0U1RQV1 116 aa9.1□□□□□ -0.95
NXF1-216ENST00000533499 MT-ATP8P03928 68 aa9.04□□□□□ -0.96
NXF1-216ENST00000533499 Q5W150 140 aa9.04□□□□□ -0.96
NXF1-216ENST00000533499 SPINK7P58062 85 aa9.03□□□□□ -0.96
NXF1-216ENST00000533499 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
NXF1-216ENST00000533499 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
NXF1-216ENST00000533499 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
NXF1-216ENST00000533499 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
NXF1-216ENST00000533499 SCGB1A1P11684 91 aa8.95□□□□□ -0.98
NXF1-216ENST00000533499 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
NXF1-216ENST00000533499 FAM236DA0A1B0GTK5 79 aa8.94□□□□□ -0.98
NXF1-216ENST00000533499 FAM236CP0DP71 79 aa8.94□□□□□ -0.98
NXF1-216ENST00000533499 IMUPQ9GZP8 106 aa8.94□□□□□ -0.98
NXF1-216ENST00000533499 C7orf65Q6ZTY9 151 aa8.93□□□□□ -0.98
NXF1-216ENST00000533499 HRES1P13985 223 aa8.92□□□□□ -0.98
NXF1-216ENST00000533499 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
NXF1-216ENST00000533499 UQCRQO14949 82 aa8.91□□□□□ -0.98
NXF1-216ENST00000533499 TRAV22A0A0B4J277 110 aa8.89□□□□□ -0.99
NXF1-216ENST00000533499 KRTAP19-2Q3LHN2 52 aa8.88□□□□□ -0.99
NXF1-216ENST00000533499 H0Y9P7 68 aa8.87□□□□□ -0.99
NXF1-216ENST00000533499 FAM236AA0A1B0GUQ0 79 aa8.86□□□□□ -0.99
NXF1-216ENST00000533499 FAM236BA0A1B0GV22 79 aa8.86□□□□□ -0.99
NXF1-216ENST00000533499 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
NXF1-216ENST00000533499 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
NXF1-216ENST00000533499 MPLKIPQ8TAP9 179 aa8.81□□□□□ -1
NXF1-216ENST00000533499 ATOX1O00244 68 aa8.8□□□□□ -1
NXF1-216ENST00000533499 MP68P56378 58 aa8.8□□□□□ -1
NXF1-216ENST00000533499 LOC101927531A0A1B0GV80 90 aa8.79□□□□□ -1
NXF1-216ENST00000533499 M0R2T5 61 aa8.77□□□□□ -1.01
NXF1-216ENST00000533499 C4orf26Q17RF5 130 aa8.77□□□□□ -1.01
NXF1-216ENST00000533499 C1orf64Q8NEQ6 169 aa8.77□□□□□ -1.01
NXF1-216ENST00000533499 LINC00208Q96KT6 92 aa8.77□□□□□ -1.01
NXF1-216ENST00000533499 CYP4F30PQ9H0H9 118 aa8.77□□□□□ -1.01
NXF1-216ENST00000533499 MT1HP80294 61 aa8.75□□□□□ -1.01
NXF1-216ENST00000533499 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
NXF1-216ENST00000533499 SMIM20Q8N5G0 67 aa8.73□□□□□ -1.01
NXF1-216ENST00000533499 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
NXF1-216ENST00000533499 TRAV7A0A075B6U4 112 aa8.7□□□□□ -1.02
NXF1-216ENST00000533499 FLGP20930 4061 aaPredicted RBP8.68□□□□□ -1.02
NXF1-216ENST00000533499 H3BPC8 53 aa8.65□□□□□ -1.02
NXF1-216ENST00000533499 H1FX-AS1Q4G0G2 97 aa8.64□□□□□ -1.03
NXF1-216ENST00000533499 KLKP1Q107X0 134 aa8.62□□□□□ -1.03
NXF1-216ENST00000533499 SERP2Q8N6R1 65 aa8.58□□□□□ -1.04
NXF1-216ENST00000533499 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
NXF1-216ENST00000533499 SNURFQ9Y675 71 aa8.54□□□□□ -1.04
NXF1-216ENST00000533499 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
NXF1-216ENST00000533499 C20orf197Q8N268 126 aa8.52□□□□□ -1.05
NXF1-216ENST00000533499 S4R3F8 94 aa8.49□□□□□ -1.05
NXF1-216ENST00000533499 ANAPC13Q9BS18 74 aa8.46□□□□□ -1.06
NXF1-216ENST00000533499 COX7CP15954 63 aa8.45□□□□□ -1.06
NXF1-216ENST00000533499 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
NXF1-216ENST00000533499 A8MUN3 132 aa8.42□□□□□ -1.06
NXF1-216ENST00000533499 LCA10Q71F78 164 aa8.41□□□□□ -1.06
NXF1-216ENST00000533499 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
NXF1-216ENST00000533499 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
NXF1-216ENST00000533499 NDUFC1O43677 76 aa8.32□□□□□ -1.08
NXF1-216ENST00000533499 KRTAP9-8Q9BYQ0 159 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms