RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
CCS-208ENST00000533244 J3KT08 172 aa10.71□□□□□ -0.69
CCS-208ENST00000533244 COL5A1-AS1Q5SY13 56 aa10.71□□□□□ -0.69
CCS-208ENST00000533244 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
CCS-208ENST00000533244 IGHV6-1A0A0B4J1U7 121 aa10.69□□□□□ -0.7
CCS-208ENST00000533244 A0A1B0GVX0 72 aa10.69□□□□□ -0.7
CCS-208ENST00000533244 SPCS1Q9Y6A9 102 aa10.69□□□□□ -0.7
CCS-208ENST00000533244 C8orf87E5RJ46 101 aa10.67□□□□□ -0.7
CCS-208ENST00000533244 PCP4L1A6NKN8 68 aa10.63□□□□□ -0.71
CCS-208ENST00000533244 SMCPP49901 116 aaPredicted RBP10.6□□□□□ -0.71
CCS-208ENST00000533244 MT1HP80294 61 aa10.6□□□□□ -0.71
CCS-208ENST00000533244 A8MWP4 228 aa10.58□□□□□ -0.72
CCS-208ENST00000533244 K7EP34 96 aa10.58□□□□□ -0.72
CCS-208ENST00000533244 NDUFB1O75438 58 aa10.58□□□□□ -0.72
CCS-208ENST00000533244 PRO0461Q9UI25 63 aa10.58□□□□□ -0.72
CCS-208ENST00000533244 NREPQ16612 68 aa10.57□□□□□ -0.72
CCS-208ENST00000533244 IGKV3D-7A0A0C4DH55 119 aa10.56□□□□□ -0.72
CCS-208ENST00000533244 COX6B2Q6YFQ2 88 aa10.52□□□□□ -0.73
CCS-208ENST00000533244 C8orf17Q9NRJ1 99 aa10.52□□□□□ -0.73
CCS-208ENST00000533244 FLGP20930 4061 aaPredicted RBP10.51□□□□□ -0.73
CCS-208ENST00000533244 PRR15Q8IV56 129 aa10.5□□□□□ -0.73
CCS-208ENST00000533244 Q8N9P0 234 aaPredicted RBP10.5□□□□□ -0.73
CCS-208ENST00000533244 GTF2H5Q6ZYL4 71 aa10.44□□□□□ -0.74
CCS-208ENST00000533244 ZCCHC13Q8WW36 166 aaKnown RBP10.44□□□□□ -0.74
CCS-208ENST00000533244 Q6ZVQ6 151 aa10.43□□□□□ -0.74
CCS-208ENST00000533244 KRTAP9-2Q9BYQ4 174 aa10.43□□□□□ -0.74
CCS-208ENST00000533244 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
CCS-208ENST00000533244 K7EQZ3 153 aa10.41□□□□□ -0.74
CCS-208ENST00000533244 BPY2O14599 106 aa10.41□□□□□ -0.74
CCS-208ENST00000533244 HRES1P13985 223 aa10.38□□□□□ -0.75
CCS-208ENST00000533244 MPLKIPQ8TAP9 179 aa10.38□□□□□ -0.75
CCS-208ENST00000533244 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
CCS-208ENST00000533244 F8W1H4 67 aa10.37□□□□□ -0.75
CCS-208ENST00000533244 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
CCS-208ENST00000533244 KRTAP10-6P60371 365 aaPredicted RBP10.37□□□□□ -0.75
CCS-208ENST00000533244 MRPL34Q9BQ48 92 aaKnown RBP10.35□□□□□ -0.75
CCS-208ENST00000533244 LINC00846Q9NV44 126 aa10.35□□□□□ -0.75
CCS-208ENST00000533244 M0R2T5 61 aa10.34□□□□□ -0.75
CCS-208ENST00000533244 hDV103S1A0JD37 113 aa10.33□□□□□ -0.76
CCS-208ENST00000533244 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
CCS-208ENST00000533244 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
CCS-208ENST00000533244 SPINK7P58062 85 aa10.29□□□□□ -0.76
CCS-208ENST00000533244 Q8N9L7 120 aa10.29□□□□□ -0.76
CCS-208ENST00000533244 LCE2DQ5TA82 110 aaPredicted RBP10.28□□□□□ -0.76
CCS-208ENST00000533244 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.77
CCS-208ENST00000533244 FAM236DA0A1B0GTK5 79 aa10.23□□□□□ -0.77
CCS-208ENST00000533244 FAM236CP0DP71 79 aa10.23□□□□□ -0.77
CCS-208ENST00000533244 CASC2Q6XLA1 102 aa10.21□□□□□ -0.78
CCS-208ENST00000533244 WFDC13Q8IUB5 93 aa10.21□□□□□ -0.78
CCS-208ENST00000533244 NDUFS5O43920 106 aa10.2□□□□□ -0.78
CCS-208ENST00000533244 CXCL6P80162 114 aa10.14□□□□□ -0.79
CCS-208ENST00000533244 Q5W150 140 aa10.14□□□□□ -0.79
CCS-208ENST00000533244 HCG22E2RYF7 251 aa10.13□□□□□ -0.79
CCS-208ENST00000533244 A0A1B0GV90 55 aa10.09□□□□□ -0.79
CCS-208ENST00000533244 KRTAP9-8Q9BYQ0 159 aa10.08□□□□□ -0.8
CCS-208ENST00000533244 ACYP1P07311 99 aa10.07□□□□□ -0.8
CCS-208ENST00000533244 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
CCS-208ENST00000533244 C7orf65Q6ZTY9 151 aa10.04□□□□□ -0.8
CCS-208ENST00000533244 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
CCS-208ENST00000533244 IGKV2-30P06310 120 aa10.02□□□□□ -0.81
CCS-208ENST00000533244 KRTAP9-6A0A140TA67 174 aa10□□□□□ -0.81
CCS-208ENST00000533244 MT2AP02795 61 aa9.95□□□□□ -0.82
CCS-208ENST00000533244 FSIP2Q5CZC0 6907 aa9.94□□□□□ -0.82
CCS-208ENST00000533244 ATP5EP2Q5VTU8 51 aa9.94□□□□□ -0.82
CCS-208ENST00000533244 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
CCS-208ENST00000533244 H1FX-AS1Q4G0G2 97 aa9.9□□□□□ -0.82
CCS-208ENST00000533244 CRCT1Q9UGL9 99 aa9.89□□□□□ -0.83
CCS-208ENST00000533244 MT1FP04733 61 aa9.87□□□□□ -0.83
CCS-208ENST00000533244 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
CCS-208ENST00000533244 LINC00643Q86TS7 51 aa9.83□□□□□ -0.84
CCS-208ENST00000533244 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
CCS-208ENST00000533244 KRTAP10-10P60014 251 aa9.78□□□□□ -0.84
CCS-208ENST00000533244 KRTAP9-3Q9BYQ3 159 aa9.76□□□□□ -0.85
CCS-208ENST00000533244 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
CCS-208ENST00000533244 TRAV22A0A0B4J277 110 aa9.74□□□□□ -0.85
CCS-208ENST00000533244 A0A087WVE0 104 aa9.73□□□□□ -0.85
CCS-208ENST00000533244 USH2AO75445 5202 aa9.73□□□□□ -0.85
CCS-208ENST00000533244 CYP4F30PQ9H0H9 118 aa9.72□□□□□ -0.85
CCS-208ENST00000533244 J3QR89 54 aa9.69□□□□□ -0.86
CCS-208ENST00000533244 UQCRQO14949 82 aa9.69□□□□□ -0.86
CCS-208ENST00000533244 C1orf64Q8NEQ6 169 aa9.69□□□□□ -0.86
CCS-208ENST00000533244 LOC101927531A0A1B0GV80 90 aa9.68□□□□□ -0.86
CCS-208ENST00000533244 LCE2BO14633 110 aa9.66□□□□□ -0.86
CCS-208ENST00000533244 H0Y9P7 68 aa9.62□□□□□ -0.87
CCS-208ENST00000533244 ATOX1O00244 68 aa9.62□□□□□ -0.87
CCS-208ENST00000533244 SSPOA2VEC9 5147 aa9.59□□□□□ -0.87
CCS-208ENST00000533244 S4R3F8 94 aa9.59□□□□□ -0.87
CCS-208ENST00000533244 OCR1Q9BZK8 76 aa9.57□□□□□ -0.88
CCS-208ENST00000533244 C5orf47Q569G3 176 aa9.56□□□□□ -0.88
CCS-208ENST00000533244 LCA10Q71F78 164 aa9.56□□□□□ -0.88
CCS-208ENST00000533244 CSAG1Q6PB30 78 aa9.49□□□□□ -0.89
CCS-208ENST00000533244 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
CCS-208ENST00000533244 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
CCS-208ENST00000533244 MP68P56378 58 aa9.45□□□□□ -0.9
CCS-208ENST00000533244 K7ERU9 68 aa9.43□□□□□ -0.9
CCS-208ENST00000533244 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
CCS-208ENST00000533244 IMUPQ9GZP8 106 aa9.41□□□□□ -0.9
CCS-208ENST00000533244 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
CCS-208ENST00000533244 H3BPC8 53 aa9.38□□□□□ -0.91
CCS-208ENST00000533244 A8MUN3 132 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms