RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 ATP11AUNQ6ZP68 121 aa13.65□□□□□ -0.22
PICALM-215ENST00000531558 A8MUU9 505 aa13.64□□□□□ -0.23
PICALM-215ENST00000531558 IGHV6-1A0A0B4J1U7 121 aa13.61□□□□□ -0.23
PICALM-215ENST00000531558 J3KT08 172 aa13.61□□□□□ -0.23
PICALM-215ENST00000531558 PCP4L1A6NKN8 68 aa13.6□□□□□ -0.23
PICALM-215ENST00000531558 NOTCH2NLQ7Z3S9 236 aa13.59□□□□□ -0.23
PICALM-215ENST00000531558 A0A1B0GVX0 72 aa13.58□□□□□ -0.24
PICALM-215ENST00000531558 KRTAP16-1A8MUX0 517 aa13.58□□□□□ -0.24
PICALM-215ENST00000531558 KRTAP19-2Q3LHN2 52 aa13.55□□□□□ -0.24
PICALM-215ENST00000531558 C8orf87E5RJ46 101 aa13.54□□□□□ -0.24
PICALM-215ENST00000531558 K7EP34 96 aa13.53□□□□□ -0.24
PICALM-215ENST00000531558 SMCPP49901 116 aaPredicted RBP13.53□□□□□ -0.24
PICALM-215ENST00000531558 LCE2CQ5TA81 110 aa13.52□□□□□ -0.25
PICALM-215ENST00000531558 NREPQ16612 68 aa13.48□□□□□ -0.25
PICALM-215ENST00000531558 PRO0461Q9UI25 63 aa13.48□□□□□ -0.25
PICALM-215ENST00000531558 NDUFB1O75438 58 aa13.47□□□□□ -0.25
PICALM-215ENST00000531558 A8MWP4 228 aa13.46□□□□□ -0.25
PICALM-215ENST00000531558 KRTAP3-3Q9BYR6 98 aa13.43□□□□□ -0.26
PICALM-215ENST00000531558 KRTAP3-2Q9BYR7 98 aa13.43□□□□□ -0.26
PICALM-215ENST00000531558 IGKV3D-7A0A0C4DH55 119 aa13.41□□□□□ -0.26
PICALM-215ENST00000531558 GTF2H5Q6ZYL4 71 aa13.39□□□□□ -0.27
PICALM-215ENST00000531558 C8orf17Q9NRJ1 99 aa13.37□□□□□ -0.27
PICALM-215ENST00000531558 PRR15Q8IV56 129 aa13.35□□□□□ -0.27
PICALM-215ENST00000531558 COX6B2Q6YFQ2 88 aa13.34□□□□□ -0.27
PICALM-215ENST00000531558 MT1HP80294 61 aa13.33□□□□□ -0.28
PICALM-215ENST00000531558 Q6ZVQ6 151 aa13.28□□□□□ -0.28
PICALM-215ENST00000531558 Q8N9P0 234 aaPredicted RBP13.28□□□□□ -0.28
PICALM-215ENST00000531558 F8W1H4 67 aa13.27□□□□□ -0.29
PICALM-215ENST00000531558 BPY2O14599 106 aa13.27□□□□□ -0.29
PICALM-215ENST00000531558 K7EQZ3 153 aa13.26□□□□□ -0.29
PICALM-215ENST00000531558 FLGP20930 4061 aaPredicted RBP13.26□□□□□ -0.29
PICALM-215ENST00000531558 ZCCHC13Q8WW36 166 aaKnown RBP13.24□□□□□ -0.29
PICALM-215ENST00000531558 MMP24-AS1A0A0U1RRL7 71 aa13.23□□□□□ -0.29
PICALM-215ENST00000531558 LINC00846Q9NV44 126 aa13.19□□□□□ -0.3
PICALM-215ENST00000531558 ETDBQ3ZM63 59 aa13.18□□□□□ -0.3
PICALM-215ENST00000531558 TMEM254Q8TBM7 123 aa13.18□□□□□ -0.3
PICALM-215ENST00000531558 MRPL34Q9BQ48 92 aaKnown RBP13.16□□□□□ -0.3
PICALM-215ENST00000531558 UBL5Q9BZL1 73 aa13.16□□□□□ -0.3
PICALM-215ENST00000531558 hDV103S1A0JD37 113 aa13.14□□□□□ -0.31
PICALM-215ENST00000531558 Q8N9L7 120 aa13.12□□□□□ -0.31
PICALM-215ENST00000531558 HRES1P13985 223 aa13.11□□□□□ -0.31
PICALM-215ENST00000531558 M0R2T5 61 aa13.1□□□□□ -0.31
PICALM-215ENST00000531558 MPLKIPQ8TAP9 179 aa13.07□□□□□ -0.32
PICALM-215ENST00000531558 SPINK7P58062 85 aa13.05□□□□□ -0.32
PICALM-215ENST00000531558 KRTAP9-2Q9BYQ4 174 aa13.04□□□□□ -0.32
PICALM-215ENST00000531558 WFDC13Q8IUB5 93 aa13.03□□□□□ -0.32
PICALM-215ENST00000531558 RBM12B-AS1Q9P1G2 102 aa13.03□□□□□ -0.32
PICALM-215ENST00000531558 NDUFS5O43920 106 aa13.02□□□□□ -0.33
PICALM-215ENST00000531558 KRTAP10-6P60371 365 aaPredicted RBP13.02□□□□□ -0.33
PICALM-215ENST00000531558 LORP23490 312 aaPredicted RBP13.01□□□□□ -0.33
PICALM-215ENST00000531558 CASC2Q6XLA1 102 aa13.01□□□□□ -0.33
PICALM-215ENST00000531558 FAM236DA0A1B0GTK5 79 aa13□□□□□ -0.33
PICALM-215ENST00000531558 FAM236CP0DP71 79 aa13□□□□□ -0.33
PICALM-215ENST00000531558 HCG22E2RYF7 251 aa12.92□□□□□ -0.34
PICALM-215ENST00000531558 CXCL6P80162 114 aa12.92□□□□□ -0.34
PICALM-215ENST00000531558 A0A1B0GV90 55 aa12.87□□□□□ -0.35
PICALM-215ENST00000531558 ACYP1P07311 99 aa12.87□□□□□ -0.35
PICALM-215ENST00000531558 Q5W150 140 aa12.87□□□□□ -0.35
PICALM-215ENST00000531558 FAM240AA0A1B0GVK7 77 aa12.84□□□□□ -0.35
PICALM-215ENST00000531558 IGKV2D-30A0A075B6S6 120 aa12.77□□□□□ -0.37
PICALM-215ENST00000531558 IGKV2-30P06310 120 aa12.77□□□□□ -0.37
PICALM-215ENST00000531558 C7orf65Q6ZTY9 151 aa12.76□□□□□ -0.37
PICALM-215ENST00000531558 ATP5EP2Q5VTU8 51 aa12.71□□□□□ -0.37
PICALM-215ENST00000531558 KRTAP9-8Q9BYQ0 159 aa12.66□□□□□ -0.38
PICALM-215ENST00000531558 TP53AIP1Q9HCN2 124 aa12.66□□□□□ -0.38
PICALM-215ENST00000531558 LINC00643Q86TS7 51 aa12.58□□□□□ -0.4
PICALM-215ENST00000531558 HIST1H4AP62805 103 aaKnown RBP12.57□□□□□ -0.4
PICALM-215ENST00000531558 H1FX-AS1Q4G0G2 97 aa12.55□□□□□ -0.4
PICALM-215ENST00000531558 MT2AP02795 61 aa12.52□□□□□ -0.41
PICALM-215ENST00000531558 C4orf26Q17RF5 130 aa12.51□□□□□ -0.41
PICALM-215ENST00000531558 FSIP2Q5CZC0 6907 aa12.5□□□□□ -0.41
PICALM-215ENST00000531558 KRTAP9-6A0A140TA67 174 aa12.49□□□□□ -0.41
PICALM-215ENST00000531558 J3QR89 54 aa12.47□□□□□ -0.41
PICALM-215ENST00000531558 A0A087WVE0 104 aa12.44□□□□□ -0.42
PICALM-215ENST00000531558 MT1FP04733 61 aa12.43□□□□□ -0.42
PICALM-215ENST00000531558 TRAV22A0A0B4J277 110 aa12.42□□□□□ -0.42
PICALM-215ENST00000531558 CRCT1Q9UGL9 99 aa12.37□□□□□ -0.43
PICALM-215ENST00000531558 UQCRQO14949 82 aa12.36□□□□□ -0.43
PICALM-215ENST00000531558 KRTAP10-10P60014 251 aa12.35□□□□□ -0.43
PICALM-215ENST00000531558 CYP4F30PQ9H0H9 118 aa12.35□□□□□ -0.43
PICALM-215ENST00000531558 KRTAP3-1Q9BYR8 98 aa12.34□□□□□ -0.43
PICALM-215ENST00000531558 LOC101927531A0A1B0GV80 90 aa12.33□□□□□ -0.44
PICALM-215ENST00000531558 C1orf64Q8NEQ6 169 aa12.32□□□□□ -0.44
PICALM-215ENST00000531558 H0Y9P7 68 aa12.28□□□□□ -0.44
PICALM-215ENST00000531558 ATOX1O00244 68 aa12.27□□□□□ -0.45
PICALM-215ENST00000531558 USH2AO75445 5202 aa12.27□□□□□ -0.45
PICALM-215ENST00000531558 KRTAP9-3Q9BYQ3 159 aa12.25□□□□□ -0.45
PICALM-215ENST00000531558 OCR1Q9BZK8 76 aa12.2□□□□□ -0.46
PICALM-215ENST00000531558 S4R3F8 94 aa12.2□□□□□ -0.46
PICALM-215ENST00000531558 C5orf47Q569G3 176 aa12.14□□□□□ -0.47
PICALM-215ENST00000531558 K7ERU9 68 aa12.13□□□□□ -0.47
PICALM-215ENST00000531558 LCE2BO14633 110 aa12.12□□□□□ -0.47
PICALM-215ENST00000531558 LCA10Q71F78 164 aa12.12□□□□□ -0.47
PICALM-215ENST00000531558 LINC00208Q96KT6 92 aa12.1□□□□□ -0.47
PICALM-215ENST00000531558 SSPOA2VEC9 5147 aa12.1□□□□□ -0.47
PICALM-215ENST00000531558 MP68P56378 58 aa12.09□□□□□ -0.47
PICALM-215ENST00000531558 CSAG1Q6PB30 78 aa12.06□□□□□ -0.48
PICALM-215ENST00000531558 SCGB1A1P11684 91 aa12.04□□□□□ -0.48
PICALM-215ENST00000531558 IMUPQ9GZP8 106 aa12.03□□□□□ -0.48
PICALM-215ENST00000531558 MT-ATP8P03928 68 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms