RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 Q6ZQT0 140 aa16.95■□□□□ 0.3
SSSCA1-205ENST00000527920 J3KT08 172 aa16.94■□□□□ 0.3
SSSCA1-205ENST00000527920 A0A1B0GVX0 72 aa16.93■□□□□ 0.3
SSSCA1-205ENST00000527920 TRBV20-1A0A075B6N2 111 aa16.92■□□□□ 0.3
SSSCA1-205ENST00000527920 A0A1B0GW54 56 aa16.92■□□□□ 0.3
SSSCA1-205ENST00000527920 LOC110117498A0A087WWA1 95 aa16.91■□□□□ 0.3
SSSCA1-205ENST00000527920 PDE6GP18545 87 aa16.89■□□□□ 0.29
SSSCA1-205ENST00000527920 BATFQ16520 125 aa16.79■□□□□ 0.28
SSSCA1-205ENST00000527920 NDUFB1O75438 58 aa16.76■□□□□ 0.27
SSSCA1-205ENST00000527920 C14orf132Q9NPU4 83 aa16.75■□□□□ 0.27
SSSCA1-205ENST00000527920 LOC105371267A0A1B0GV96 52 aa16.73■□□□□ 0.27
SSSCA1-205ENST00000527920 A8MWP4 228 aa16.7■□□□□ 0.26
SSSCA1-205ENST00000527920 C9orf118A6NHY6 69 aa16.69■□□□□ 0.26
SSSCA1-205ENST00000527920 MPLKIPQ8TAP9 179 aa16.69■□□□□ 0.26
SSSCA1-205ENST00000527920 CRCT1Q9UGL9 99 aa16.68■□□□□ 0.26
SSSCA1-205ENST00000527920 HRES1P13985 223 aa16.67■□□□□ 0.26
SSSCA1-205ENST00000527920 Q8N9P0 234 aaPredicted RBP16.65■□□□□ 0.26
SSSCA1-205ENST00000527920 ZCCHC13Q8WW36 166 aaKnown RBP16.65■□□□□ 0.26
SSSCA1-205ENST00000527920 H3BT86 120 aa16.64■□□□□ 0.25
SSSCA1-205ENST00000527920 RBM12B-AS1Q9P1G2 102 aa16.64■□□□□ 0.25
SSSCA1-205ENST00000527920 TAX1BP3O14907 124 aa16.63■□□□□ 0.25
SSSCA1-205ENST00000527920 A0A1W2PPM0 123 aa16.62■□□□□ 0.25
SSSCA1-205ENST00000527920 C8orf17Q9NRJ1 99 aa16.62■□□□□ 0.25
SSSCA1-205ENST00000527920 FSIP2Q5CZC0 6907 aa16.61■□□□□ 0.25
SSSCA1-205ENST00000527920 IGKV3D-7A0A0C4DH55 119 aa16.6■□□□□ 0.25
SSSCA1-205ENST00000527920 FAM236DA0A1B0GTK5 79 aa16.6■□□□□ 0.25
SSSCA1-205ENST00000527920 FAM236CP0DP71 79 aa16.6■□□□□ 0.25
SSSCA1-205ENST00000527920 NREPQ16612 68 aa16.58■□□□□ 0.24
SSSCA1-205ENST00000527920 PRR15Q8IV56 129 aa16.54■□□□□ 0.24
SSSCA1-205ENST00000527920 Q6ZVQ6 151 aa16.48■□□□□ 0.23
SSSCA1-205ENST00000527920 KRTAP9-8Q9BYQ0 159 aa16.48■□□□□ 0.23
SSSCA1-205ENST00000527920 SPINK7P58062 85 aa16.47■□□□□ 0.23
SSSCA1-205ENST00000527920 MTURNQ8N3F0 131 aa16.47■□□□□ 0.23
SSSCA1-205ENST00000527920 MMP24-AS1A0A0U1RRL7 71 aa16.39■□□□□ 0.21
SSSCA1-205ENST00000527920 TMEM254Q8TBM7 123 aa16.38■□□□□ 0.21
SSSCA1-205ENST00000527920 SPCS1Q9Y6A9 102 aa16.37■□□□□ 0.21
SSSCA1-205ENST00000527920 MRPL34Q9BQ48 92 aaKnown RBP16.35■□□□□ 0.21
SSSCA1-205ENST00000527920 K7EQZ3 153 aa16.33■□□□□ 0.2
SSSCA1-205ENST00000527920 hDV103S1A0JD37 113 aa16.29■□□□□ 0.2
SSSCA1-205ENST00000527920 BPY2O14599 106 aa16.29■□□□□ 0.2
SSSCA1-205ENST00000527920 COL5A1-AS1Q5SY13 56 aa16.26■□□□□ 0.19
SSSCA1-205ENST00000527920 MT2AP02795 61 aa16.24■□□□□ 0.19
SSSCA1-205ENST00000527920 SMCPP49901 116 aaPredicted RBP16.24■□□□□ 0.19
SSSCA1-205ENST00000527920 WFDC13Q8IUB5 93 aa16.23■□□□□ 0.19
SSSCA1-205ENST00000527920 NDUFS5O43920 106 aa16.15■□□□□ 0.18
SSSCA1-205ENST00000527920 PRO0461Q9UI25 63 aa16.15■□□□□ 0.18
SSSCA1-205ENST00000527920 K7EP34 96 aa16.11■□□□□ 0.17
SSSCA1-205ENST00000527920 MT1FP04733 61 aa16.11■□□□□ 0.17
SSSCA1-205ENST00000527920 Q8N9L7 120 aa16.06■□□□□ 0.16
SSSCA1-205ENST00000527920 CASC2Q6XLA1 102 aa16.04■□□□□ 0.16
SSSCA1-205ENST00000527920 KRTAP10-10P60014 251 aa16.03■□□□□ 0.16
SSSCA1-205ENST00000527920 UBL5Q9BZL1 73 aa16.03■□□□□ 0.16
SSSCA1-205ENST00000527920 LINC00846Q9NV44 126 aa16.01■□□□□ 0.15
SSSCA1-205ENST00000527920 Q5W150 140 aa15.98■□□□□ 0.15
SSSCA1-205ENST00000527920 USH2AO75445 5202 aa15.98■□□□□ 0.15
SSSCA1-205ENST00000527920 KRTAP9-3Q9BYQ3 159 aa15.97■□□□□ 0.15
SSSCA1-205ENST00000527920 C7orf65Q6ZTY9 151 aa15.95■□□□□ 0.14
SSSCA1-205ENST00000527920 HCG22E2RYF7 251 aa15.93■□□□□ 0.14
SSSCA1-205ENST00000527920 GTF2H5Q6ZYL4 71 aa15.93■□□□□ 0.14
SSSCA1-205ENST00000527920 IGKV2D-30A0A075B6S6 120 aa15.92■□□□□ 0.14
SSSCA1-205ENST00000527920 IGKV2-30P06310 120 aa15.92■□□□□ 0.14
SSSCA1-205ENST00000527920 H1FX-AS1Q4G0G2 97 aa15.9■□□□□ 0.14
SSSCA1-205ENST00000527920 CXCL6P80162 114 aa15.89■□□□□ 0.13
SSSCA1-205ENST00000527920 LCE2BO14633 110 aa15.86■□□□□ 0.13
SSSCA1-205ENST00000527920 SSPOA2VEC9 5147 aa15.84■□□□□ 0.13
SSSCA1-205ENST00000527920 F8W1H4 67 aa15.84■□□□□ 0.13
SSSCA1-205ENST00000527920 PCP4L1A6NKN8 68 aa15.74■□□□□ 0.11
SSSCA1-205ENST00000527920 ETDBQ3ZM63 59 aa15.72■□□□□ 0.11
SSSCA1-205ENST00000527920 C4orf26Q17RF5 130 aa15.65■□□□□ 0.1
SSSCA1-205ENST00000527920 TP53AIP1Q9HCN2 124 aa15.62■□□□□ 0.09
SSSCA1-205ENST00000527920 KRTAP19-1Q8IUB9 90 aa15.56■□□□□ 0.08
SSSCA1-205ENST00000527920 KRTAP9-1A8MXZ3 250 aaPredicted RBP15.52■□□□□ 0.08
SSSCA1-205ENST00000527920 FCGBPQ9Y6R7 5405 aaPredicted RBP15.5■□□□□ 0.07
SSSCA1-205ENST00000527920 ACYP1P07311 99 aa15.46■□□□□ 0.07
SSSCA1-205ENST00000527920 KRTAP3-1Q9BYR8 98 aa15.44■□□□□ 0.06
SSSCA1-205ENST00000527920 FAM240AA0A1B0GVK7 77 aa15.41■□□□□ 0.06
SSSCA1-205ENST00000527920 C1orf64Q8NEQ6 169 aa15.38■□□□□ 0.05
SSSCA1-205ENST00000527920 KRTAP19-6Q3LI70 58 aa15.35■□□□□ 0.05
SSSCA1-205ENST00000527920 ATP5EP2Q5VTU8 51 aa15.35■□□□□ 0.05
SSSCA1-205ENST00000527920 S4R3F8 94 aa15.33■□□□□ 0.04
SSSCA1-205ENST00000527920 C5orf47Q569G3 176 aa15.32■□□□□ 0.04
SSSCA1-205ENST00000527920 KRTAP9-7A8MTY7 169 aa15.31■□□□□ 0.04
SSSCA1-205ENST00000527920 CYP4F30PQ9H0H9 118 aa15.26■□□□□ 0.03
SSSCA1-205ENST00000527920 TRAV22A0A0B4J277 110 aa15.25■□□□□ 0.03
SSSCA1-205ENST00000527920 CSAG1Q6PB30 78 aa15.24■□□□□ 0.03
SSSCA1-205ENST00000527920 LCA10Q71F78 164 aa15.22■□□□□ 0.03
SSSCA1-205ENST00000527920 LOC101927531A0A1B0GV80 90 aa15.19■□□□□ 0.02
SSSCA1-205ENST00000527920 HIST1H4AP62805 103 aaKnown RBP15.15■□□□□ 0.02
SSSCA1-205ENST00000527920 FAM236AA0A1B0GUQ0 79 aa15.12■□□□□ 0.01
SSSCA1-205ENST00000527920 FAM236BA0A1B0GV22 79 aa15.12■□□□□ 0.01
SSSCA1-205ENST00000527920 UQCRQO14949 82 aa15.11■□□□□ 0.01
SSSCA1-205ENST00000527920 LINC00643Q86TS7 51 aa15.07■□□□□ 0
SSSCA1-205ENST00000527920 ATOX1O00244 68 aa15.05■□□□□ -0
SSSCA1-205ENST00000527920 KRTAP3-3Q9BYR6 98 aa15.02■□□□□ -0
SSSCA1-205ENST00000527920 H0Y9P7 68 aa14.98□□□□□ -0.01
SSSCA1-205ENST00000527920 MACF1Q9UPN3 7388 aaKnown RBP14.96□□□□□ -0.01
SSSCA1-205ENST00000527920 A0A087WVE0 104 aa14.94□□□□□ -0.02
SSSCA1-205ENST00000527920 SPRR2GQ9BYE4 73 aa14.94□□□□□ -0.02
SSSCA1-205ENST00000527920 A0A1B0GV90 55 aa14.9□□□□□ -0.02
SSSCA1-205ENST00000527920 KLKP1Q107X0 134 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms