RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 MUC17Q685J3 4493 aa9.61□□□□□ -0.87
PACSIN3-202ENST00000524509 NDUFB1O75438 58 aa9.6□□□□□ -0.87
PACSIN3-202ENST00000524509 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
PACSIN3-202ENST00000524509 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
PACSIN3-202ENST00000524509 LINC00313P59037 77 aa9.56□□□□□ -0.88
PACSIN3-202ENST00000524509 DEFB116Q30KQ4 102 aa9.56□□□□□ -0.88
PACSIN3-202ENST00000524509 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
PACSIN3-202ENST00000524509 ETDBQ3ZM63 59 aa9.54□□□□□ -0.88
PACSIN3-202ENST00000524509 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
PACSIN3-202ENST00000524509 A0A1B0GVX0 72 aa9.52□□□□□ -0.89
PACSIN3-202ENST00000524509 UBL5Q9BZL1 73 aa9.52□□□□□ -0.89
PACSIN3-202ENST00000524509 IGHV6-1A0A0B4J1U7 121 aa9.51□□□□□ -0.89
PACSIN3-202ENST00000524509 A8MWP4 228 aa9.51□□□□□ -0.89
PACSIN3-202ENST00000524509 RPL37P61927 97 aaKnown RBP9.51□□□□□ -0.89
PACSIN3-202ENST00000524509 Q75L30 129 aa9.51□□□□□ -0.89
PACSIN3-202ENST00000524509 BPY2O14599 106 aa9.48□□□□□ -0.89
PACSIN3-202ENST00000524509 DSCR10P59022 87 aa9.48□□□□□ -0.89
PACSIN3-202ENST00000524509 A0A1B0GV90 55 aa9.47□□□□□ -0.89
PACSIN3-202ENST00000524509 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
PACSIN3-202ENST00000524509 Q6ZVQ6 151 aa9.46□□□□□ -0.9
PACSIN3-202ENST00000524509 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
PACSIN3-202ENST00000524509 ACYP1P07311 99 aa9.45□□□□□ -0.9
PACSIN3-202ENST00000524509 A8MUU9 505 aa9.43□□□□□ -0.9
PACSIN3-202ENST00000524509 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
PACSIN3-202ENST00000524509 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
PACSIN3-202ENST00000524509 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
PACSIN3-202ENST00000524509 IGKV3D-7A0A0C4DH55 119 aa9.41□□□□□ -0.9
PACSIN3-202ENST00000524509 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
PACSIN3-202ENST00000524509 C8orf17Q9NRJ1 99 aa9.38□□□□□ -0.91
PACSIN3-202ENST00000524509 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
PACSIN3-202ENST00000524509 NOTCH2NLQ7Z3S9 236 aa9.36□□□□□ -0.91
PACSIN3-202ENST00000524509 K7EQZ3 153 aa9.33□□□□□ -0.92
PACSIN3-202ENST00000524509 J3QR89 54 aa9.32□□□□□ -0.92
PACSIN3-202ENST00000524509 CXCL6P80162 114 aa9.32□□□□□ -0.92
PACSIN3-202ENST00000524509 TMEM254Q8TBM7 123 aa9.31□□□□□ -0.92
PACSIN3-202ENST00000524509 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
PACSIN3-202ENST00000524509 Q8N9P0 234 aaPredicted RBP9.3□□□□□ -0.92
PACSIN3-202ENST00000524509 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
PACSIN3-202ENST00000524509 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
PACSIN3-202ENST00000524509 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
PACSIN3-202ENST00000524509 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
PACSIN3-202ENST00000524509 CASC2Q6XLA1 102 aa9.23□□□□□ -0.93
PACSIN3-202ENST00000524509 Q8N9L7 120 aa9.22□□□□□ -0.93
PACSIN3-202ENST00000524509 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
PACSIN3-202ENST00000524509 HCG22E2RYF7 251 aa9.2□□□□□ -0.94
PACSIN3-202ENST00000524509 NDUFS5O43920 106 aa9.2□□□□□ -0.94
PACSIN3-202ENST00000524509 LCE2CQ5TA81 110 aa9.2□□□□□ -0.94
PACSIN3-202ENST00000524509 LINC00643Q86TS7 51 aa9.19□□□□□ -0.94
PACSIN3-202ENST00000524509 WFDC13Q8IUB5 93 aa9.17□□□□□ -0.94
PACSIN3-202ENST00000524509 MT1HP80294 61 aa9.11□□□□□ -0.95
PACSIN3-202ENST00000524509 KRTAP19-2Q3LHN2 52 aa9.11□□□□□ -0.95
PACSIN3-202ENST00000524509 K7ERU9 68 aa9.1□□□□□ -0.95
PACSIN3-202ENST00000524509 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
PACSIN3-202ENST00000524509 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
PACSIN3-202ENST00000524509 HIST1H4AP62805 103 aaKnown RBP9.08□□□□□ -0.96
PACSIN3-202ENST00000524509 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
PACSIN3-202ENST00000524509 RBM12B-AS1Q9P1G2 102 aa9.06□□□□□ -0.96
PACSIN3-202ENST00000524509 SPINK7P58062 85 aa9.05□□□□□ -0.96
PACSIN3-202ENST00000524509 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
PACSIN3-202ENST00000524509 FAM236DA0A1B0GTK5 79 aa8.97□□□□□ -0.97
PACSIN3-202ENST00000524509 FAM236CP0DP71 79 aa8.97□□□□□ -0.97
PACSIN3-202ENST00000524509 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
PACSIN3-202ENST00000524509 KRTAP9-7A8MTY7 169 aa8.96□□□□□ -0.98
PACSIN3-202ENST00000524509 HRES1P13985 223 aa8.96□□□□□ -0.98
PACSIN3-202ENST00000524509 Q5W150 140 aa8.95□□□□□ -0.98
PACSIN3-202ENST00000524509 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
PACSIN3-202ENST00000524509 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
PACSIN3-202ENST00000524509 IGKV2D-30A0A075B6S6 120 aa8.92□□□□□ -0.98
PACSIN3-202ENST00000524509 IGKV2-30P06310 120 aa8.92□□□□□ -0.98
PACSIN3-202ENST00000524509 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.91□□□□□ -0.98
PACSIN3-202ENST00000524509 UQCRQO14949 82 aa8.91□□□□□ -0.98
PACSIN3-202ENST00000524509 A0A087WVE0 104 aa8.89□□□□□ -0.99
PACSIN3-202ENST00000524509 M0R2T5 61 aa8.89□□□□□ -0.99
PACSIN3-202ENST00000524509 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
PACSIN3-202ENST00000524509 ATOX1O00244 68 aa8.86□□□□□ -0.99
PACSIN3-202ENST00000524509 SCGB1A1P11684 91 aa8.83□□□□□ -1
PACSIN3-202ENST00000524509 LOC101927531A0A1B0GV80 90 aa8.82□□□□□ -1
PACSIN3-202ENST00000524509 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
PACSIN3-202ENST00000524509 H0Y9P7 68 aa8.77□□□□□ -1.01
PACSIN3-202ENST00000524509 MP68P56378 58 aa8.77□□□□□ -1.01
PACSIN3-202ENST00000524509 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
PACSIN3-202ENST00000524509 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
PACSIN3-202ENST00000524509 OCR1Q9BZK8 76 aa8.75□□□□□ -1.01
PACSIN3-202ENST00000524509 SMIM20Q8N5G0 67 aa8.74□□□□□ -1.01
PACSIN3-202ENST00000524509 CYP4F30PQ9H0H9 118 aa8.74□□□□□ -1.01
PACSIN3-202ENST00000524509 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
PACSIN3-202ENST00000524509 H3BPC8 53 aa8.71□□□□□ -1.02
PACSIN3-202ENST00000524509 SSPOA2VEC9 5147 aa8.71□□□□□ -1.02
PACSIN3-202ENST00000524509 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
PACSIN3-202ENST00000524509 C1orf64Q8NEQ6 169 aa8.69□□□□□ -1.02
PACSIN3-202ENST00000524509 USH2AO75445 5202 aa8.68□□□□□ -1.02
PACSIN3-202ENST00000524509 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
PACSIN3-202ENST00000524509 FAM236AA0A1B0GUQ0 79 aa8.65□□□□□ -1.02
PACSIN3-202ENST00000524509 FAM236BA0A1B0GV22 79 aa8.65□□□□□ -1.02
PACSIN3-202ENST00000524509 TRAV7A0A075B6U4 112 aa8.61□□□□□ -1.03
PACSIN3-202ENST00000524509 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
PACSIN3-202ENST00000524509 A8MUN3 132 aa8.55□□□□□ -1.04
PACSIN3-202ENST00000524509 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
PACSIN3-202ENST00000524509 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
PACSIN3-202ENST00000524509 S4R3F8 94 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms