RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 HIST1H2BCP62807 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST2H2BEQ16778 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BHQ93079 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BNQ99877 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BMQ99879 126 aa5.46□□□□□ -1.54
SDCBP-211ENST00000523441 A0A1W2PNM2 257 aa5.45□□□□□ -1.54
SDCBP-211ENST00000523441 FABP2P12104 132 aa5.45□□□□□ -1.54
SDCBP-211ENST00000523441 HIST1H2BLQ99880 126 aa5.45□□□□□ -1.54
SDCBP-211ENST00000523441 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
SDCBP-211ENST00000523441 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
SDCBP-211ENST00000523441 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SDCBP-211ENST00000523441 SCGB1A1P11684 91 aa5.41□□□□□ -1.54
SDCBP-211ENST00000523441 K7ERU9 68 aa5.4□□□□□ -1.54
SDCBP-211ENST00000523441 SNCGO76070 127 aa5.4□□□□□ -1.54
SDCBP-211ENST00000523441 LYRM7Q5U5X0 104 aa5.4□□□□□ -1.54
SDCBP-211ENST00000523441 FAM218AQ96MZ4 157 aa5.4□□□□□ -1.54
SDCBP-211ENST00000523441 UBE2V1Q13404 147 aa5.39□□□□□ -1.55
SDCBP-211ENST00000523441 ANKRD29Q8N6D5 301 aa5.37□□□□□ -1.55
SDCBP-211ENST00000523441 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
SDCBP-211ENST00000523441 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
SDCBP-211ENST00000523441 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
SDCBP-211ENST00000523441 HIST1H4GQ99525 98 aa5.36□□□□□ -1.55
SDCBP-211ENST00000523441 VAMP8Q9BV40 100 aa5.36□□□□□ -1.55
SDCBP-211ENST00000523441 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
SDCBP-211ENST00000523441 A0A1B0GVX0 72 aa5.35□□□□□ -1.55
SDCBP-211ENST00000523441 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
SDCBP-211ENST00000523441 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
SDCBP-211ENST00000523441 VPS25Q9BRG1 176 aa5.34□□□□□ -1.55
SDCBP-211ENST00000523441 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
SDCBP-211ENST00000523441 KMT2DO14686 5537 aa5.34□□□□□ -1.55
SDCBP-211ENST00000523441 TRBV7-4A0A0J9YYF1 115 aa5.33□□□□□ -1.56
SDCBP-211ENST00000523441 TRACP01848 142 aa5.33□□□□□ -1.56
SDCBP-211ENST00000523441 RAB37Q96AX2 223 aa5.33□□□□□ -1.56
SDCBP-211ENST00000523441 H0YGX0 51 aa5.32□□□□□ -1.56
SDCBP-211ENST00000523441 CCKP06307 115 aa5.32□□□□□ -1.56
SDCBP-211ENST00000523441 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
SDCBP-211ENST00000523441 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
SDCBP-211ENST00000523441 FAM236AA0A1B0GUQ0 79 aa5.31□□□□□ -1.56
SDCBP-211ENST00000523441 FAM236BA0A1B0GV22 79 aa5.31□□□□□ -1.56
SDCBP-211ENST00000523441 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
SDCBP-211ENST00000523441 MT1BP07438 61 aa5.3□□□□□ -1.56
SDCBP-211ENST00000523441 Q5VV11 94 aa5.3□□□□□ -1.56
SDCBP-211ENST00000523441 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
SDCBP-211ENST00000523441 GTF2H5Q6ZYL4 71 aa5.28□□□□□ -1.56
SDCBP-211ENST00000523441 J3QR89 54 aa5.27□□□□□ -1.57
SDCBP-211ENST00000523441 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
SDCBP-211ENST00000523441 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
SDCBP-211ENST00000523441 IGKV3D-7A0A0C4DH55 119 aa5.24□□□□□ -1.57
SDCBP-211ENST00000523441 DNAL4O96015 105 aa5.24□□□□□ -1.57
SDCBP-211ENST00000523441 SPATA45Q537H7 98 aa5.24□□□□□ -1.57
SDCBP-211ENST00000523441 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
SDCBP-211ENST00000523441 ORMDL1Q9P0S3 153 aa5.24□□□□□ -1.57
SDCBP-211ENST00000523441 SPRR2EP22531 72 aa5.23□□□□□ -1.57
SDCBP-211ENST00000523441 SPRR2BP35325 72 aa5.23□□□□□ -1.57
SDCBP-211ENST00000523441 SPRR2AP35326 72 aa5.23□□□□□ -1.57
SDCBP-211ENST00000523441 DSCR8Q96T75 97 aa5.23□□□□□ -1.57
SDCBP-211ENST00000523441 IMUPQ9GZP8 106 aa5.23□□□□□ -1.57
SDCBP-211ENST00000523441 PAM16Q9Y3D7 125 aa5.23□□□□□ -1.57
SDCBP-211ENST00000523441 BATFQ16520 125 aa5.22□□□□□ -1.57
SDCBP-211ENST00000523441 C5orf47Q569G3 176 aa5.22□□□□□ -1.57
SDCBP-211ENST00000523441 A0A1B0GX51 115 aa5.21□□□□□ -1.58
SDCBP-211ENST00000523441 NDUFB1O75438 58 aa5.21□□□□□ -1.58
SDCBP-211ENST00000523441 C8orf17Q9NRJ1 99 aa5.21□□□□□ -1.58
SDCBP-211ENST00000523441 A0A0B4J2C4 111 aa5.2□□□□□ -1.58
SDCBP-211ENST00000523441 TRIAP1O43715 76 aa5.2□□□□□ -1.58
SDCBP-211ENST00000523441 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
SDCBP-211ENST00000523441 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
SDCBP-211ENST00000523441 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
SDCBP-211ENST00000523441 J3KT08 172 aa5.18□□□□□ -1.58
SDCBP-211ENST00000523441 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
SDCBP-211ENST00000523441 TMEM256-PLSCR3K7ERE1 68 aa5.17□□□□□ -1.58
SDCBP-211ENST00000523441 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
SDCBP-211ENST00000523441 Q6ZVQ6 151 aa5.17□□□□□ -1.58
SDCBP-211ENST00000523441 PRO1854Q9UHT4 67 aa5.17□□□□□ -1.58
SDCBP-211ENST00000523441 TAX1BP3O14907 124 aa5.16□□□□□ -1.58
SDCBP-211ENST00000523441 NDUFS5O43920 106 aa5.16□□□□□ -1.58
SDCBP-211ENST00000523441 COX8AP10176 69 aa5.16□□□□□ -1.58
SDCBP-211ENST00000523441 PSMB2P49721 201 aa5.16□□□□□ -1.58
SDCBP-211ENST00000523441 K7EP34 96 aa5.14□□□□□ -1.59
SDCBP-211ENST00000523441 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
SDCBP-211ENST00000523441 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
SDCBP-211ENST00000523441 F8W1H4 67 aa5.13□□□□□ -1.59
SDCBP-211ENST00000523441 HSD52Q0P140 79 aa5.13□□□□□ -1.59
SDCBP-211ENST00000523441 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
SDCBP-211ENST00000523441 C4orf26Q17RF5 130 aa5.12□□□□□ -1.59
SDCBP-211ENST00000523441 H3BQ85 93 aa5.11□□□□□ -1.59
SDCBP-211ENST00000523441 CEND1Q8N111 149 aa5.11□□□□□ -1.59
SDCBP-211ENST00000523441 FXYD2P54710 66 aa5.1□□□□□ -1.59
SDCBP-211ENST00000523441 Q6ZQT0 140 aa5.1□□□□□ -1.59
SDCBP-211ENST00000523441 C9JAW5 83 aa5.09□□□□□ -1.59
SDCBP-211ENST00000523441 C2orf91Q6ZV80 131 aa5.09□□□□□ -1.59
SDCBP-211ENST00000523441 MRPL34Q9BQ48 92 aaKnown RBP5.09□□□□□ -1.59
SDCBP-211ENST00000523441 HIGD1BQ9P298 99 aa5.09□□□□□ -1.59
SDCBP-211ENST00000523441 A0A1W2PPM0 123 aa5.08□□□□□ -1.6
SDCBP-211ENST00000523441 K7ERJ3 54 aa5.08□□□□□ -1.6
SDCBP-211ENST00000523441 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
SDCBP-211ENST00000523441 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
SDCBP-211ENST00000523441 SPRR2DP22532 72 aa5.06□□□□□ -1.6
SDCBP-211ENST00000523441 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms