RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 DNAL4O96015 105 aa10.7□□□□□ -0.7
PVT1-218ENST00000523328 CEND1Q8N111 149 aa10.69□□□□□ -0.7
PVT1-218ENST00000523328 TMEM256-PLSCR3K7ERE1 68 aa10.68□□□□□ -0.7
PVT1-218ENST00000523328 NEBP20929 6669 aa10.64□□□□□ -0.71
PVT1-218ENST00000523328 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
PVT1-218ENST00000523328 A6NJY4 79 aa10.64□□□□□ -0.71
PVT1-218ENST00000523328 FXYD2P54710 66 aa10.63□□□□□ -0.71
PVT1-218ENST00000523328 VPS25Q9BRG1 176 aa10.63□□□□□ -0.71
PVT1-218ENST00000523328 MUC12Q9UKN1 5478 aa10.62□□□□□ -0.71
PVT1-218ENST00000523328 S100A6P06703 90 aa10.61□□□□□ -0.71
PVT1-218ENST00000523328 UBE2V1Q13404 147 aa10.61□□□□□ -0.71
PVT1-218ENST00000523328 PAM16Q9Y3D7 125 aa10.61□□□□□ -0.71
PVT1-218ENST00000523328 J3KT08 172 aa10.6□□□□□ -0.71
PVT1-218ENST00000523328 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
PVT1-218ENST00000523328 PSMB2P49721 201 aa10.54□□□□□ -0.72
PVT1-218ENST00000523328 H1FX-AS1Q4G0G2 97 aa10.54□□□□□ -0.72
PVT1-218ENST00000523328 LYRM7Q5U5X0 104 aa10.54□□□□□ -0.72
PVT1-218ENST00000523328 RBM3P98179 157 aaKnown RBP10.53□□□□□ -0.72
PVT1-218ENST00000523328 C8orf17Q9NRJ1 99 aa10.53□□□□□ -0.72
PVT1-218ENST00000523328 NDUFB1O75438 58 aa10.52□□□□□ -0.73
PVT1-218ENST00000523328 DSCR8Q96T75 97 aa10.51□□□□□ -0.73
PVT1-218ENST00000523328 COX6CP09669 75 aa10.5□□□□□ -0.73
PVT1-218ENST00000523328 Q6ZQT0 140 aa10.5□□□□□ -0.73
PVT1-218ENST00000523328 K7ERJ3 54 aa10.49□□□□□ -0.73
PVT1-218ENST00000523328 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
PVT1-218ENST00000523328 C21orf62-AS1Q17RA5 79 aa10.48□□□□□ -0.73
PVT1-218ENST00000523328 VAMP8Q9BV40 100 aa10.48□□□□□ -0.73
PVT1-218ENST00000523328 KRTAP20-1Q3LI63 56 aa10.45□□□□□ -0.74
PVT1-218ENST00000523328 Q6ZVQ6 151 aa10.44□□□□□ -0.74
PVT1-218ENST00000523328 A6NN06 94 aa10.42□□□□□ -0.74
PVT1-218ENST00000523328 C9JAW5 83 aa10.42□□□□□ -0.74
PVT1-218ENST00000523328 S100A1P23297 94 aa10.39□□□□□ -0.75
PVT1-218ENST00000523328 HSD52Q0P140 79 aa10.38□□□□□ -0.75
PVT1-218ENST00000523328 MT1BP07438 61 aa10.37□□□□□ -0.75
PVT1-218ENST00000523328 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
PVT1-218ENST00000523328 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
PVT1-218ENST00000523328 MRPL34Q9BQ48 92 aaKnown RBP10.32□□□□□ -0.76
PVT1-218ENST00000523328 MMP24-AS1A0A0U1RRL7 71 aa10.3□□□□□ -0.76
PVT1-218ENST00000523328 TMEM254Q8TBM7 123 aa10.3□□□□□ -0.76
PVT1-218ENST00000523328 A0A1B0GW54 56 aa10.29□□□□□ -0.76
PVT1-218ENST00000523328 SCGB1C2P0DMR2 95 aa10.29□□□□□ -0.76
PVT1-218ENST00000523328 KRTAP5-9P26371 169 aa10.29□□□□□ -0.76
PVT1-218ENST00000523328 Q5VV11 94 aa10.26□□□□□ -0.77
PVT1-218ENST00000523328 KMT2DO14686 5537 aa10.24□□□□□ -0.77
PVT1-218ENST00000523328 IGKV2D-30A0A075B6S6 120 aa10.24□□□□□ -0.77
PVT1-218ENST00000523328 LOC110117498A0A087WWA1 95 aa10.24□□□□□ -0.77
PVT1-218ENST00000523328 IGKV2-30P06310 120 aa10.24□□□□□ -0.77
PVT1-218ENST00000523328 KRTAP19-8Q3LI54 63 aa10.24□□□□□ -0.77
PVT1-218ENST00000523328 KRTAP10-5P60370 271 aa10.23□□□□□ -0.77
PVT1-218ENST00000523328 MDN1Q9NU22 5596 aa10.22□□□□□ -0.77
PVT1-218ENST00000523328 C7orf65Q6ZTY9 151 aa10.21□□□□□ -0.77
PVT1-218ENST00000523328 FAM236AA0A1B0GUQ0 79 aa10.2□□□□□ -0.78
PVT1-218ENST00000523328 FAM236BA0A1B0GV22 79 aa10.2□□□□□ -0.78
PVT1-218ENST00000523328 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
PVT1-218ENST00000523328 JMJD7-PLA2G4BH0Y9G9 81 aa10.2□□□□□ -0.78
PVT1-218ENST00000523328 NDUFS5O43920 106 aa10.2□□□□□ -0.78
PVT1-218ENST00000523328 SPRR2GQ9BYE4 73 aa10.2□□□□□ -0.78
PVT1-218ENST00000523328 Q5W150 140 aa10.19□□□□□ -0.78
PVT1-218ENST00000523328 C5orf47Q569G3 176 aa10.17□□□□□ -0.78
PVT1-218ENST00000523328 PDE6GP18545 87 aa10.16□□□□□ -0.78
PVT1-218ENST00000523328 NREPQ16612 68 aa10.15□□□□□ -0.78
PVT1-218ENST00000523328 C4orf26Q17RF5 130 aa10.15□□□□□ -0.78
PVT1-218ENST00000523328 K7EQZ3 153 aa10.13□□□□□ -0.79
PVT1-218ENST00000523328 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
PVT1-218ENST00000523328 PYY3Q5JQD4 70 aa10.11□□□□□ -0.79
PVT1-218ENST00000523328 ATXN8Q156A1 80 aa10.08□□□□□ -0.8
PVT1-218ENST00000523328 UQCR10Q9UDW1 63 aa10.07□□□□□ -0.8
PVT1-218ENST00000523328 KRTAP2-3P0C7H8 128 aa10.03□□□□□ -0.8
PVT1-218ENST00000523328 KRTAP3-1Q9BYR8 98 aa10.03□□□□□ -0.8
PVT1-218ENST00000523328 KRTAP2-4Q9BYR9 128 aa10.03□□□□□ -0.8
PVT1-218ENST00000523328 S4R3F8 94 aa10.01□□□□□ -0.81
PVT1-218ENST00000523328 CSAG1Q6PB30 78 aa10□□□□□ -0.81
PVT1-218ENST00000523328 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
PVT1-218ENST00000523328 KLKP1Q107X0 134 aa9.96□□□□□ -0.82
PVT1-218ENST00000523328 LCA10Q71F78 164 aa9.96□□□□□ -0.82
PVT1-218ENST00000523328 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
PVT1-218ENST00000523328 BPY2O14599 106 aa9.92□□□□□ -0.82
PVT1-218ENST00000523328 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
PVT1-218ENST00000523328 CXCL6P80162 114 aa9.88□□□□□ -0.83
PVT1-218ENST00000523328 Q8N9L7 120 aa9.88□□□□□ -0.83
PVT1-218ENST00000523328 IMUPQ9GZP8 106 aa9.88□□□□□ -0.83
PVT1-218ENST00000523328 C1orf64Q8NEQ6 169 aa9.87□□□□□ -0.83
PVT1-218ENST00000523328 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
PVT1-218ENST00000523328 SPRR2FQ96RM1 72 aa9.81□□□□□ -0.84
PVT1-218ENST00000523328 SPRR2EP22531 72 aa9.8□□□□□ -0.84
PVT1-218ENST00000523328 SPRR2BP35325 72 aa9.8□□□□□ -0.84
PVT1-218ENST00000523328 SPRR2AP35326 72 aa9.8□□□□□ -0.84
PVT1-218ENST00000523328 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
PVT1-218ENST00000523328 M0R143 59 aa9.76□□□□□ -0.85
PVT1-218ENST00000523328 CRIPTQ9P021 101 aa9.76□□□□□ -0.85
PVT1-218ENST00000523328 H3BT86 120 aa9.69□□□□□ -0.86
PVT1-218ENST00000523328 KRTAP2-2Q9BYT5 123 aa9.68□□□□□ -0.86
PVT1-218ENST00000523328 KRTAP2-1Q9BYU5 128 aa9.68□□□□□ -0.86
PVT1-218ENST00000523328 LCE1AQ5T7P2 110 aa9.63□□□□□ -0.87
PVT1-218ENST00000523328 A0A087WVE0 104 aa9.6□□□□□ -0.87
PVT1-218ENST00000523328 TSTD3H0UI37 97 aa9.59□□□□□ -0.87
PVT1-218ENST00000523328 KRTAP8-1Q8IUC2 63 aa9.58□□□□□ -0.88
PVT1-218ENST00000523328 MT1XP80297 61 aa9.57□□□□□ -0.88
PVT1-218ENST00000523328 PRO2289Q9P1D8 64 aa9.55□□□□□ -0.88
PVT1-218ENST00000523328 TP53AIP1Q9HCN2 124 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms