RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520		Q5VSD8	79 aa		5.39	□□□□□ -1.55
CTNNA1-223	ENST00000520520	CASC2	Q6XLA1	102 aa		5.38	□□□□□ -1.55
CTNNA1-223	ENST00000520520		A8MWP4	228 aa		5.37	□□□□□ -1.55
CTNNA1-223	ENST00000520520	SPANXA2-OT1	Q8N9U9	137 aa		5.37	□□□□□ -1.55
CTNNA1-223	ENST00000520520	MPLKIP	Q8TAP9	179 aa		5.37	□□□□□ -1.55
CTNNA1-223	ENST00000520520	BRK1	Q8WUW1	75 aa		5.37	□□□□□ -1.55
CTNNA1-223	ENST00000520520	MYCBP2	O75592	4640 aa		5.37	□□□□□ -1.55
CTNNA1-223	ENST00000520520	TRAV22	A0A0B4J277	110 aa		5.36	□□□□□ -1.55
CTNNA1-223	ENST00000520520	RPL37A	P61513	92 aa	Known RBP	5.36	□□□□□ -1.55
CTNNA1-223	ENST00000520520		Q1T7F1	81 aa		5.36	□□□□□ -1.55
CTNNA1-223	ENST00000520520	KRTAP19-4	Q3LI73	84 aa		5.36	□□□□□ -1.55
CTNNA1-223	ENST00000520520	WFDC13	Q8IUB5	93 aa		5.36	□□□□□ -1.55
CTNNA1-223	ENST00000520520		H0Y9P7	68 aa		5.35	□□□□□ -1.55
CTNNA1-223	ENST00000520520	KRTAP10-1	P60331	282 aa		5.35	□□□□□ -1.55
CTNNA1-223	ENST00000520520	FAM229B	Q4G0N7	80 aa		5.35	□□□□□ -1.55
CTNNA1-223	ENST00000520520	PRR15	Q8IV56	129 aa		5.35	□□□□□ -1.55
CTNNA1-223	ENST00000520520	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.35	□□□□□ -1.55
CTNNA1-223	ENST00000520520		A0A1W2PNN7	141 aa		5.34	□□□□□ -1.55
CTNNA1-223	ENST00000520520		Q6ZRN7	208 aa	Predicted RBP	5.34	□□□□□ -1.55
CTNNA1-223	ENST00000520520	C1orf64	Q8NEQ6	169 aa		5.34	□□□□□ -1.55
CTNNA1-223	ENST00000520520	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.33	□□□□□ -1.56
CTNNA1-223	ENST00000520520	MOBP	Q13875	183 aa		5.33	□□□□□ -1.56
CTNNA1-223	ENST00000520520	C9orf163	Q8N9P6	203 aa		5.33	□□□□□ -1.56
CTNNA1-223	ENST00000520520	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.32	□□□□□ -1.56
CTNNA1-223	ENST00000520520		A0A087WTM6	91 aa		5.32	□□□□□ -1.56
CTNNA1-223	ENST00000520520	C1orf195	Q5TG92	126 aa		5.32	□□□□□ -1.56
CTNNA1-223	ENST00000520520	PHF5A	Q7RTV0	110 aa	Known RBP	5.32	□□□□□ -1.56
CTNNA1-223	ENST00000520520	LINC00208	Q96KT6	92 aa		5.32	□□□□□ -1.56
CTNNA1-223	ENST00000520520	TP53AIP1	Q9HCN2	124 aa		5.32	□□□□□ -1.56
CTNNA1-223	ENST00000520520	VPS13B	Q7Z7G8	4022 aa		5.32	□□□□□ -1.56
CTNNA1-223	ENST00000520520	LINC00472	Q9H8W2	130 aa		5.31	□□□□□ -1.56
CTNNA1-223	ENST00000520520	LCE3B	Q5TA77	95 aa		5.3	□□□□□ -1.56
CTNNA1-223	ENST00000520520	IGLV5-52	A0A0A0MRZ9	124 aa		5.29	□□□□□ -1.56
CTNNA1-223	ENST00000520520	DEFB116	Q30KQ4	102 aa		5.29	□□□□□ -1.56
CTNNA1-223	ENST00000520520	SRRM2	Q9UQ35	2752 aa	Known RBP	5.29	□□□□□ -1.56
CTNNA1-223	ENST00000520520	CHTF8	P0CG12	524 aa		5.28	□□□□□ -1.56
CTNNA1-223	ENST00000520520	LIMD2	Q9BT23	127 aa		5.28	□□□□□ -1.56
CTNNA1-223	ENST00000520520	FLG2	Q5D862	2391 aa	Predicted RBP	5.28	□□□□□ -1.56
CTNNA1-223	ENST00000520520	MMP24-AS1	A0A0U1RRL7	71 aa		5.27	□□□□□ -1.57
CTNNA1-223	ENST00000520520	KRTAP13-1	Q8IUC0	172 aa		5.27	□□□□□ -1.57
CTNNA1-223	ENST00000520520		A0A0G2JQZ4	141 aa		5.26	□□□□□ -1.57
CTNNA1-223	ENST00000520520	LRCOL1	A6NCL2	159 aa		5.26	□□□□□ -1.57
CTNNA1-223	ENST00000520520	LINC00483	Q53H64	154 aa		5.26	□□□□□ -1.57
CTNNA1-223	ENST00000520520	KRTAP9-9	Q9BYP9	154 aa		5.26	□□□□□ -1.57
CTNNA1-223	ENST00000520520	KRTAP9-4	Q9BYQ2	154 aa		5.26	□□□□□ -1.57
CTNNA1-223	ENST00000520520	SPACA4	Q8TDM5	124 aa		5.25	□□□□□ -1.57
CTNNA1-223	ENST00000520520	PRR4	Q16378	134 aa		5.24	□□□□□ -1.57
CTNNA1-223	ENST00000520520	UBR4	Q5T4S7	5183 aa		5.23	□□□□□ -1.57
CTNNA1-223	ENST00000520520	DNAH8	Q96JB1	4490 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520	IGLV7-46	A0A075B6I9	117 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520	IGLV9-49	A0A0B4J1Y8	123 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520		A0A1B0GVX0	72 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520	LCE4A	Q5TA78	99 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520	KRTAP11-1	Q8IUC1	163 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520	C8orf17	Q9NRJ1	99 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520	HMCN2	Q8NDA2	5059 aa		5.22	□□□□□ -1.57
CTNNA1-223	ENST00000520520	PSPHP1	O15172	72 aa		5.21	□□□□□ -1.58
CTNNA1-223	ENST00000520520	ASB16-AS1	Q495Z4	193 aa		5.21	□□□□□ -1.58
CTNNA1-223	ENST00000520520	LRP1	Q07954	4544 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-223	ENST00000520520	KRTAP9-7	A8MTY7	169 aa		5.2	□□□□□ -1.58
CTNNA1-223	ENST00000520520	NDUFS5	O43920	106 aa		5.19	□□□□□ -1.58
CTNNA1-223	ENST00000520520	COA5	Q86WW8	74 aa		5.19	□□□□□ -1.58
CTNNA1-223	ENST00000520520	MRPL34	Q9BQ48	92 aa	Known RBP	5.19	□□□□□ -1.58
CTNNA1-223	ENST00000520520	LOC101927531	A0A1B0GV80	90 aa		5.18	□□□□□ -1.58
CTNNA1-223	ENST00000520520		Q96NJ1	140 aa		5.18	□□□□□ -1.58
CTNNA1-223	ENST00000520520	PRR15L	Q9BU68	103 aa		5.18	□□□□□ -1.58
CTNNA1-223	ENST00000520520	FAT3	Q8TDW7	4589 aa		5.18	□□□□□ -1.58
CTNNA1-223	ENST00000520520	IGHV6-1	A0A0B4J1U7	121 aa		5.17	□□□□□ -1.58
CTNNA1-223	ENST00000520520		A8MUN3	132 aa		5.17	□□□□□ -1.58
CTNNA1-223	ENST00000520520	ZNF861P	O60384	105 aa		5.17	□□□□□ -1.58
CTNNA1-223	ENST00000520520	CD164	Q04900	197 aa		5.17	□□□□□ -1.58
CTNNA1-223	ENST00000520520		Q75L30	129 aa		5.17	□□□□□ -1.58
CTNNA1-223	ENST00000520520		Q8N9P0	234 aa	Predicted RBP	5.17	□□□□□ -1.58
CTNNA1-223	ENST00000520520	PLAC8	Q9NZF1	115 aa		5.17	□□□□□ -1.58
CTNNA1-223	ENST00000520520	C8orf87	E5RJ46	101 aa		5.16	□□□□□ -1.58
CTNNA1-223	ENST00000520520	CHKB-CPT1B	H3BT56	60 aa		5.16	□□□□□ -1.58
CTNNA1-223	ENST00000520520		Q5VV11	94 aa		5.16	□□□□□ -1.58
CTNNA1-223	ENST00000520520	PANO1	I0J062	215 aa		5.14	□□□□□ -1.59
CTNNA1-223	ENST00000520520	PCOTH	Q58A44	107 aa		5.14	□□□□□ -1.59
CTNNA1-223	ENST00000520520		Q6ZSA8	131 aa		5.14	□□□□□ -1.59
CTNNA1-223	ENST00000520520	PSORS1C2	Q9UIG4	136 aa		5.14	□□□□□ -1.59
CTNNA1-223	ENST00000520520	PMAIP1	Q13794	54 aa		5.13	□□□□□ -1.59
CTNNA1-223	ENST00000520520	CIRBP-AS1	Q8TBR5	109 aa		5.13	□□□□□ -1.59
CTNNA1-223	ENST00000520520		A6NED7	52 aa		5.12	□□□□□ -1.59
CTNNA1-223	ENST00000520520	KRTAP3-1	Q9BYR8	98 aa		5.12	□□□□□ -1.59
CTNNA1-223	ENST00000520520	SSBP3-AS1	Q7Z2R9	100 aa		5.11	□□□□□ -1.59
CTNNA1-223	ENST00000520520	LINC01558	Q9Y6Z2	57 aa		5.11	□□□□□ -1.59
CTNNA1-223	ENST00000520520	KRTAP10-4	P60372	401 aa	Predicted RBP	5.1	□□□□□ -1.59
CTNNA1-223	ENST00000520520	IGLV7-43	P04211	117 aa		5.09	□□□□□ -1.59
CTNNA1-223	ENST00000520520	ATP11AUN	Q6ZP68	121 aa		5.09	□□□□□ -1.59
CTNNA1-223	ENST00000520520	KRTAP4-8	A0A0G2JLE6	195 aa		5.08	□□□□□ -1.6
CTNNA1-223	ENST00000520520	CDC42SE1	Q9NRR8	79 aa		5.08	□□□□□ -1.6
CTNNA1-223	ENST00000520520	PKHD1L1	Q86WI1	4243 aa		5.08	□□□□□ -1.6
CTNNA1-223	ENST00000520520	ACYP2	P14621	99 aa		5.06	□□□□□ -1.6
CTNNA1-223	ENST00000520520	SPINK6	Q6UWN8	80 aa		5.06	□□□□□ -1.6
CTNNA1-223	ENST00000520520	RNF213	Q63HN8	5207 aa		5.05	□□□□□ -1.6
CTNNA1-223	ENST00000520520	HRES1	P13985	223 aa		5.05	□□□□□ -1.6
CTNNA1-223	ENST00000520520	LRP2	P98164	4655 aa		5.04	□□□□□ -1.6
CTNNA1-223	ENST00000520520	SPAG11A	Q6PDA7	123 aa		5.04	□□□□□ -1.6
CTNNA1-223	ENST00000520520	KTN1-AS1	Q86SY8	53 aa		5.04	□□□□□ -1.6

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