RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 SPCS1Q9Y6A9 102 aa9.77□□□□□ -0.85
SREK1-207ENST00000520058 IGHV6-1A0A0B4J1U7 121 aa9.76□□□□□ -0.85
SREK1-207ENST00000520058 NDUFB1O75438 58 aa9.76□□□□□ -0.85
SREK1-207ENST00000520058 FAT4Q6V0I7 4981 aa9.75□□□□□ -0.85
SREK1-207ENST00000520058 A8MUU9 505 aa9.74□□□□□ -0.85
SREK1-207ENST00000520058 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
SREK1-207ENST00000520058 LCE2AQ5TA79 106 aaPredicted RBP9.74□□□□□ -0.85
SREK1-207ENST00000520058 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
SREK1-207ENST00000520058 NREPQ16612 68 aa9.7□□□□□ -0.86
SREK1-207ENST00000520058 MTURNQ8N3F0 131 aa9.7□□□□□ -0.86
SREK1-207ENST00000520058 COX6B2Q6YFQ2 88 aa9.67□□□□□ -0.86
SREK1-207ENST00000520058 PCP4L1A6NKN8 68 aa9.65□□□□□ -0.86
SREK1-207ENST00000520058 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
SREK1-207ENST00000520058 A8MWP4 228 aa9.64□□□□□ -0.87
SREK1-207ENST00000520058 NOTCH2NLQ7Z3S9 236 aa9.64□□□□□ -0.87
SREK1-207ENST00000520058 K7EP34 96 aa9.61□□□□□ -0.87
SREK1-207ENST00000520058 GTF2H5Q6ZYL4 71 aa9.61□□□□□ -0.87
SREK1-207ENST00000520058 KRTAP19-2Q3LHN2 52 aa9.57□□□□□ -0.88
SREK1-207ENST00000520058 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
SREK1-207ENST00000520058 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
SREK1-207ENST00000520058 IGKV3D-7A0A0C4DH55 119 aa9.55□□□□□ -0.88
SREK1-207ENST00000520058 PRR15Q8IV56 129 aa9.54□□□□□ -0.88
SREK1-207ENST00000520058 BPY2O14599 106 aa9.53□□□□□ -0.88
SREK1-207ENST00000520058 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
SREK1-207ENST00000520058 PRO0461Q9UI25 63 aa9.51□□□□□ -0.89
SREK1-207ENST00000520058 F8W1H4 67 aa9.5□□□□□ -0.89
SREK1-207ENST00000520058 M0R2T5 61 aa9.5□□□□□ -0.89
SREK1-207ENST00000520058 MT1HP80294 61 aa9.5□□□□□ -0.89
SREK1-207ENST00000520058 Q6ZVQ6 151 aa9.5□□□□□ -0.89
SREK1-207ENST00000520058 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
SREK1-207ENST00000520058 ZCCHC13Q8WW36 166 aaKnown RBP9.49□□□□□ -0.89
SREK1-207ENST00000520058 UBL5Q9BZL1 73 aa9.48□□□□□ -0.89
SREK1-207ENST00000520058 TMEM254Q8TBM7 123 aa9.45□□□□□ -0.9
SREK1-207ENST00000520058 RBM12B-AS1Q9P1G2 102 aa9.45□□□□□ -0.9
SREK1-207ENST00000520058 K7EQZ3 153 aa9.44□□□□□ -0.9
SREK1-207ENST00000520058 MRPL34Q9BQ48 92 aaKnown RBP9.44□□□□□ -0.9
SREK1-207ENST00000520058 FAM236DA0A1B0GTK5 79 aa9.43□□□□□ -0.9
SREK1-207ENST00000520058 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
SREK1-207ENST00000520058 FAM236CP0DP71 79 aa9.43□□□□□ -0.9
SREK1-207ENST00000520058 MMP24-AS1A0A0U1RRL7 71 aa9.42□□□□□ -0.9
SREK1-207ENST00000520058 NDUFS5O43920 106 aa9.4□□□□□ -0.9
SREK1-207ENST00000520058 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
SREK1-207ENST00000520058 ETDBQ3ZM63 59 aa9.37□□□□□ -0.91
SREK1-207ENST00000520058 SPINK7P58062 85 aa9.36□□□□□ -0.91
SREK1-207ENST00000520058 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
SREK1-207ENST00000520058 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
SREK1-207ENST00000520058 HRES1P13985 223 aa9.33□□□□□ -0.92
SREK1-207ENST00000520058 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
SREK1-207ENST00000520058 Q8N9L7 120 aa9.32□□□□□ -0.92
SREK1-207ENST00000520058 KRTAP10-6P60371 365 aaPredicted RBP9.3□□□□□ -0.92
SREK1-207ENST00000520058 MPLKIPQ8TAP9 179 aa9.28□□□□□ -0.92
SREK1-207ENST00000520058 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
SREK1-207ENST00000520058 CXCL6P80162 114 aa9.26□□□□□ -0.93
SREK1-207ENST00000520058 HCG22E2RYF7 251 aa9.25□□□□□ -0.93
SREK1-207ENST00000520058 ACYP1P07311 99 aa9.25□□□□□ -0.93
SREK1-207ENST00000520058 FLGP20930 4061 aaPredicted RBP9.25□□□□□ -0.93
SREK1-207ENST00000520058 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
SREK1-207ENST00000520058 IGKV2D-30A0A075B6S6 120 aa9.17□□□□□ -0.94
SREK1-207ENST00000520058 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
SREK1-207ENST00000520058 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
SREK1-207ENST00000520058 Q5W150 140 aa9.14□□□□□ -0.95
SREK1-207ENST00000520058 ATP5EP2Q5VTU8 51 aa9.13□□□□□ -0.95
SREK1-207ENST00000520058 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
SREK1-207ENST00000520058 A0A1B0GV90 55 aa9.09□□□□□ -0.95
SREK1-207ENST00000520058 HIST1H4AP62805 103 aaKnown RBP9.04□□□□□ -0.96
SREK1-207ENST00000520058 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
SREK1-207ENST00000520058 J3QR89 54 aa9□□□□□ -0.97
SREK1-207ENST00000520058 LINC00643Q86TS7 51 aa9□□□□□ -0.97
SREK1-207ENST00000520058 KRTAP9-6A0A140TA67 174 aa8.99□□□□□ -0.97
SREK1-207ENST00000520058 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
SREK1-207ENST00000520058 C4orf26Q17RF5 130 aa8.95□□□□□ -0.98
SREK1-207ENST00000520058 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
SREK1-207ENST00000520058 MT2AP02795 61 aa8.9□□□□□ -0.98
SREK1-207ENST00000520058 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
SREK1-207ENST00000520058 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
SREK1-207ENST00000520058 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
SREK1-207ENST00000520058 UQCRQO14949 82 aa8.88□□□□□ -0.99
SREK1-207ENST00000520058 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
SREK1-207ENST00000520058 ATOX1O00244 68 aa8.85□□□□□ -0.99
SREK1-207ENST00000520058 C1orf64Q8NEQ6 169 aa8.85□□□□□ -0.99
SREK1-207ENST00000520058 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
SREK1-207ENST00000520058 A0A087WVE0 104 aa8.82□□□□□ -1
SREK1-207ENST00000520058 MT1FP04733 61 aa8.82□□□□□ -1
SREK1-207ENST00000520058 H0Y9P7 68 aa8.79□□□□□ -1
SREK1-207ENST00000520058 S4R3F8 94 aa8.78□□□□□ -1
SREK1-207ENST00000520058 MP68P56378 58 aa8.74□□□□□ -1.01
SREK1-207ENST00000520058 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
SREK1-207ENST00000520058 C5orf47Q569G3 176 aa8.71□□□□□ -1.02
SREK1-207ENST00000520058 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
SREK1-207ENST00000520058 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.02
SREK1-207ENST00000520058 K7ERU9 68 aa8.7□□□□□ -1.02
SREK1-207ENST00000520058 SCGB1A1P11684 91 aa8.7□□□□□ -1.02
SREK1-207ENST00000520058 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
SREK1-207ENST00000520058 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
SREK1-207ENST00000520058 LCA10Q71F78 164 aa8.66□□□□□ -1.02
SREK1-207ENST00000520058 FAM236AA0A1B0GUQ0 79 aa8.62□□□□□ -1.03
SREK1-207ENST00000520058 FAM236BA0A1B0GV22 79 aa8.62□□□□□ -1.03
SREK1-207ENST00000520058 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
SREK1-207ENST00000520058 H3BPC8 53 aa8.61□□□□□ -1.03
SREK1-207ENST00000520058 LCE2BO14633 110 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms