RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 MPLKIPQ8TAP9 179 aa12.71□□□□□ -0.37
VEGFA-220ENST00000519767 BAALC-AS2P0C853 105 aa12.69□□□□□ -0.38
VEGFA-220ENST00000519767 C9JAW5 83 aa12.68□□□□□ -0.38
VEGFA-220ENST00000519767 J3KT08 172 aa12.68□□□□□ -0.38
VEGFA-220ENST00000519767 HRES1P13985 223 aa12.68□□□□□ -0.38
VEGFA-220ENST00000519767 Q6ZQT0 140 aa12.61□□□□□ -0.39
VEGFA-220ENST00000519767 NDUFB1O75438 58 aa12.59□□□□□ -0.39
VEGFA-220ENST00000519767 MTURNQ8N3F0 131 aa12.59□□□□□ -0.39
VEGFA-220ENST00000519767 SMIM6P0DI80 62 aa12.58□□□□□ -0.4
VEGFA-220ENST00000519767 ZCCHC13Q8WW36 166 aaKnown RBP12.58□□□□□ -0.4
VEGFA-220ENST00000519767 A0A1B0GW54 56 aa12.56□□□□□ -0.4
VEGFA-220ENST00000519767 MT2AP02795 61 aa12.56□□□□□ -0.4
VEGFA-220ENST00000519767 JMJD7-PLA2G4BH0Y9G9 81 aa12.55□□□□□ -0.4
VEGFA-220ENST00000519767 USH2AO75445 5202 aa12.55□□□□□ -0.4
VEGFA-220ENST00000519767 ATXN8Q156A1 80 aa12.53□□□□□ -0.4
VEGFA-220ENST00000519767 M0R143 59 aa12.51□□□□□ -0.41
VEGFA-220ENST00000519767 PDE6GP18545 87 aa12.51□□□□□ -0.41
VEGFA-220ENST00000519767 SPINK7P58062 85 aa12.51□□□□□ -0.41
VEGFA-220ENST00000519767 Q8N9P0 234 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-220ENST00000519767 LOC110117498A0A087WWA1 95 aa12.49□□□□□ -0.41
VEGFA-220ENST00000519767 LOC105371267A0A1B0GV96 52 aa12.47□□□□□ -0.41
VEGFA-220ENST00000519767 A8MWP4 228 aa12.47□□□□□ -0.41
VEGFA-220ENST00000519767 SSPOA2VEC9 5147 aa12.45□□□□□ -0.42
VEGFA-220ENST00000519767 KRTAP10-10P60014 251 aa12.45□□□□□ -0.42
VEGFA-220ENST00000519767 MT1FP04733 61 aa12.44□□□□□ -0.42
VEGFA-220ENST00000519767 C8orf17Q9NRJ1 99 aa12.44□□□□□ -0.42
VEGFA-220ENST00000519767 LYRM7Q5U5X0 104 aa12.43□□□□□ -0.42
VEGFA-220ENST00000519767 NAA38Q9BRA0 125 aaKnown RBP12.41□□□□□ -0.42
VEGFA-220ENST00000519767 IGKV3D-7A0A0C4DH55 119 aa12.39□□□□□ -0.43
VEGFA-220ENST00000519767 KRTAP9-3Q9BYQ3 159 aa12.39□□□□□ -0.43
VEGFA-220ENST00000519767 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
VEGFA-220ENST00000519767 Q6ZVQ6 151 aa12.36□□□□□ -0.43
VEGFA-220ENST00000519767 C14orf132Q9NPU4 83 aa12.36□□□□□ -0.43
VEGFA-220ENST00000519767 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-220ENST00000519767 NREPQ16612 68 aa12.35□□□□□ -0.43
VEGFA-220ENST00000519767 PRR15Q8IV56 129 aa12.34□□□□□ -0.43
VEGFA-220ENST00000519767 LCE2BO14633 110 aa12.33□□□□□ -0.44
VEGFA-220ENST00000519767 WFDC13Q8IUB5 93 aa12.29□□□□□ -0.44
VEGFA-220ENST00000519767 KRTAP9-7A8MTY7 169 aa12.26□□□□□ -0.45
VEGFA-220ENST00000519767 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
VEGFA-220ENST00000519767 FCGBPQ9Y6R7 5405 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-220ENST00000519767 MRPL34Q9BQ48 92 aaKnown RBP12.23□□□□□ -0.45
VEGFA-220ENST00000519767 KRTAP19-1Q8IUB9 90 aa12.22□□□□□ -0.45
VEGFA-220ENST00000519767 MMP24-AS1A0A0U1RRL7 71 aa12.2□□□□□ -0.46
VEGFA-220ENST00000519767 hDV103S1A0JD37 113 aa12.17□□□□□ -0.46
VEGFA-220ENST00000519767 BATFQ16520 125 aa12.17□□□□□ -0.46
VEGFA-220ENST00000519767 H3BT86 120 aa12.15□□□□□ -0.46
VEGFA-220ENST00000519767 K7EQZ3 153 aa12.12□□□□□ -0.47
VEGFA-220ENST00000519767 NDUFS5O43920 106 aa12.12□□□□□ -0.47
VEGFA-220ENST00000519767 LINC00846Q9NV44 126 aa12.12□□□□□ -0.47
VEGFA-220ENST00000519767 H1FX-AS1Q4G0G2 97 aa12.11□□□□□ -0.47
VEGFA-220ENST00000519767 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
VEGFA-220ENST00000519767 BPY2O14599 106 aa12.09□□□□□ -0.47
VEGFA-220ENST00000519767 A0A1W2PPM0 123 aa12.05□□□□□ -0.48
VEGFA-220ENST00000519767 TAX1BP3O14907 124 aa12.01□□□□□ -0.49
VEGFA-220ENST00000519767 IGKV2D-30A0A075B6S6 120 aa11.99□□□□□ -0.49
VEGFA-220ENST00000519767 IGKV2-30P06310 120 aa11.99□□□□□ -0.49
VEGFA-220ENST00000519767 KRTAP19-6Q3LI70 58 aa11.99□□□□□ -0.49
VEGFA-220ENST00000519767 C7orf65Q6ZTY9 151 aa11.98□□□□□ -0.49
VEGFA-220ENST00000519767 Q5W150 140 aa11.97□□□□□ -0.49
VEGFA-220ENST00000519767 CASC2Q6XLA1 102 aa11.94□□□□□ -0.5
VEGFA-220ENST00000519767 Q8N9L7 120 aa11.89□□□□□ -0.51
VEGFA-220ENST00000519767 HCG22E2RYF7 251 aa11.88□□□□□ -0.51
VEGFA-220ENST00000519767 CXCL6P80162 114 aa11.87□□□□□ -0.51
VEGFA-220ENST00000519767 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
VEGFA-220ENST00000519767 SPCS1Q9Y6A9 102 aa11.86□□□□□ -0.51
VEGFA-220ENST00000519767 MACF1Q9UPN3 7388 aaKnown RBP11.84□□□□□ -0.51
VEGFA-220ENST00000519767 C4orf26Q17RF5 130 aa11.81□□□□□ -0.52
VEGFA-220ENST00000519767 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
VEGFA-220ENST00000519767 UBL5Q9BZL1 73 aa11.79□□□□□ -0.52
VEGFA-220ENST00000519767 SYNE2Q8WXH0 6885 aaKnown RBP11.78□□□□□ -0.52
VEGFA-220ENST00000519767 PCP4L1A6NKN8 68 aa11.77□□□□□ -0.53
VEGFA-220ENST00000519767 K7EP34 96 aa11.67□□□□□ -0.54
VEGFA-220ENST00000519767 PRO0461Q9UI25 63 aa11.67□□□□□ -0.54
VEGFA-220ENST00000519767 C5orf47Q569G3 176 aa11.64□□□□□ -0.55
VEGFA-220ENST00000519767 KRTAP3-1Q9BYR8 98 aa11.62□□□□□ -0.55
VEGFA-220ENST00000519767 TP53AIP1Q9HCN2 124 aa11.61□□□□□ -0.55
VEGFA-220ENST00000519767 CSAG1Q6PB30 78 aa11.6□□□□□ -0.55
VEGFA-220ENST00000519767 S4R3F8 94 aa11.6□□□□□ -0.55
VEGFA-220ENST00000519767 C1orf64Q8NEQ6 169 aa11.59□□□□□ -0.55
VEGFA-220ENST00000519767 FAM236AA0A1B0GUQ0 79 aa11.58□□□□□ -0.56
VEGFA-220ENST00000519767 FAM236BA0A1B0GV22 79 aa11.58□□□□□ -0.56
VEGFA-220ENST00000519767 GTF2H5Q6ZYL4 71 aa11.58□□□□□ -0.56
VEGFA-220ENST00000519767 KRTAP6-3Q3LI67 103 aa11.54□□□□□ -0.56
VEGFA-220ENST00000519767 LCA10Q71F78 164 aa11.5□□□□□ -0.57
VEGFA-220ENST00000519767 F8W1H4 67 aa11.47□□□□□ -0.57
VEGFA-220ENST00000519767 SPRR2GQ9BYE4 73 aa11.42□□□□□ -0.58
VEGFA-220ENST00000519767 Q5VV11 94 aa11.41□□□□□ -0.58
VEGFA-220ENST00000519767 A6NN06 94 aa11.38□□□□□ -0.59
VEGFA-220ENST00000519767 KRTAP19-8Q3LI54 63 aa11.38□□□□□ -0.59
VEGFA-220ENST00000519767 ETDBQ3ZM63 59 aa11.38□□□□□ -0.59
VEGFA-220ENST00000519767 CYP4F30PQ9H0H9 118 aa11.38□□□□□ -0.59
VEGFA-220ENST00000519767 MT1BP07438 61 aa11.37□□□□□ -0.59
VEGFA-220ENST00000519767 KLKP1Q107X0 134 aa11.33□□□□□ -0.6
VEGFA-220ENST00000519767 KRTAP3-3Q9BYR6 98 aa11.31□□□□□ -0.6
VEGFA-220ENST00000519767 TRAV22A0A0B4J277 110 aa11.27□□□□□ -0.61
VEGFA-220ENST00000519767 LOC101927531A0A1B0GV80 90 aa11.27□□□□□ -0.61
VEGFA-220ENST00000519767 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
VEGFA-220ENST00000519767 ACYP1P07311 99 aa11.23□□□□□ -0.61
VEGFA-220ENST00000519767 KRTAP10-5P60370 271 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms