RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885		Q6ZQT0	140 aa		12.52	□□□□□ -0.41
CNOT7-204	ENST00000518885	LOC110117498	A0A087WWA1	95 aa		12.51	□□□□□ -0.41
CNOT7-204	ENST00000518885	KRTAP16-1	A8MUX0	517 aa		12.51	□□□□□ -0.41
CNOT7-204	ENST00000518885	LCE2D	Q5TA82	110 aa	Predicted RBP	12.5	□□□□□ -0.41
CNOT7-204	ENST00000518885	NDUFB1	O75438	58 aa		12.49	□□□□□ -0.41
CNOT7-204	ENST00000518885	NOTCH2NL	Q7Z3S9	236 aa		12.45	□□□□□ -0.42
CNOT7-204	ENST00000518885	KRTAP10-6	P60371	365 aa	Predicted RBP	12.43	□□□□□ -0.42
CNOT7-204	ENST00000518885	C14orf132	Q9NPU4	83 aa		12.41	□□□□□ -0.42
CNOT7-204	ENST00000518885	LOC105371267	A0A1B0GV96	52 aa		12.4	□□□□□ -0.42
CNOT7-204	ENST00000518885	C9orf118	A6NHY6	69 aa		12.4	□□□□□ -0.42
CNOT7-204	ENST00000518885	LOR	P23490	312 aa	Predicted RBP	12.4	□□□□□ -0.42
CNOT7-204	ENST00000518885	FLG	P20930	4061 aa	Predicted RBP	12.4	□□□□□ -0.42
CNOT7-204	ENST00000518885		H3BT86	120 aa		12.36	□□□□□ -0.43
CNOT7-204	ENST00000518885	KRTAP9-6	A0A140TA67	174 aa		12.35	□□□□□ -0.43
CNOT7-204	ENST00000518885		A8MWP4	228 aa		12.35	□□□□□ -0.43
CNOT7-204	ENST00000518885		A0A1W2PPM0	123 aa		12.34	□□□□□ -0.43
CNOT7-204	ENST00000518885	NREP	Q16612	68 aa		12.34	□□□□□ -0.43
CNOT7-204	ENST00000518885	RBM12B-AS1	Q9P1G2	102 aa		12.34	□□□□□ -0.43
CNOT7-204	ENST00000518885	FAM236D	A0A1B0GTK5	79 aa		12.32	□□□□□ -0.44
CNOT7-204	ENST00000518885	FAM236C	P0DP71	79 aa		12.32	□□□□□ -0.44
CNOT7-204	ENST00000518885	TAX1BP3	O14907	124 aa		12.31	□□□□□ -0.44
CNOT7-204	ENST00000518885	ZCCHC13	Q8WW36	166 aa	Known RBP	12.28	□□□□□ -0.44
CNOT7-204	ENST00000518885	C8orf17	Q9NRJ1	99 aa		12.27	□□□□□ -0.45
CNOT7-204	ENST00000518885		Q8N9P0	234 aa	Predicted RBP	12.25	□□□□□ -0.45
CNOT7-204	ENST00000518885	IGKV3D-7	A0A0C4DH55	119 aa		12.24	□□□□□ -0.45
CNOT7-204	ENST00000518885	MTURN	Q8N3F0	131 aa		12.23	□□□□□ -0.45
CNOT7-204	ENST00000518885	PRR15	Q8IV56	129 aa		12.22	□□□□□ -0.45
CNOT7-204	ENST00000518885	HRES1	P13985	223 aa		12.2	□□□□□ -0.46
CNOT7-204	ENST00000518885		Q6ZVQ6	151 aa		12.2	□□□□□ -0.46
CNOT7-204	ENST00000518885	SPCS1	Q9Y6A9	102 aa		12.19	□□□□□ -0.46
CNOT7-204	ENST00000518885	MPLKIP	Q8TAP9	179 aa		12.18	□□□□□ -0.46
CNOT7-204	ENST00000518885	FSIP2	Q5CZC0	6907 aa		12.15	□□□□□ -0.46
CNOT7-204	ENST00000518885	SPINK7	P58062	85 aa		12.14	□□□□□ -0.47
CNOT7-204	ENST00000518885	COL5A1-AS1	Q5SY13	56 aa		12.14	□□□□□ -0.47
CNOT7-204	ENST00000518885	TMEM254	Q8TBM7	123 aa		12.12	□□□□□ -0.47
CNOT7-204	ENST00000518885	CRCT1	Q9UGL9	99 aa		12.12	□□□□□ -0.47
CNOT7-204	ENST00000518885	BPY2	O14599	106 aa		12.11	□□□□□ -0.47
CNOT7-204	ENST00000518885	MRPL34	Q9BQ48	92 aa	Known RBP	12.1	□□□□□ -0.47
CNOT7-204	ENST00000518885	MMP24-AS1	A0A0U1RRL7	71 aa		12.08	□□□□□ -0.48
CNOT7-204	ENST00000518885	hDV103S1	A0JD37	113 aa		12.07	□□□□□ -0.48
CNOT7-204	ENST00000518885		K7EQZ3	153 aa		12.06	□□□□□ -0.48
CNOT7-204	ENST00000518885	NDUFS5	O43920	106 aa		12.03	□□□□□ -0.48
CNOT7-204	ENST00000518885		K7EP34	96 aa		11.98	□□□□□ -0.49
CNOT7-204	ENST00000518885	WFDC13	Q8IUB5	93 aa		11.98	□□□□□ -0.49
CNOT7-204	ENST00000518885	KRTAP9-8	Q9BYQ0	159 aa		11.97	□□□□□ -0.49
CNOT7-204	ENST00000518885	SMCP	P49901	116 aa	Predicted RBP	11.96	□□□□□ -0.49
CNOT7-204	ENST00000518885	UBL5	Q9BZL1	73 aa		11.96	□□□□□ -0.49
CNOT7-204	ENST00000518885	GTF2H5	Q6ZYL4	71 aa		11.93	□□□□□ -0.5
CNOT7-204	ENST00000518885	CASC2	Q6XLA1	102 aa		11.91	□□□□□ -0.5
CNOT7-204	ENST00000518885	PRO0461	Q9UI25	63 aa		11.91	□□□□□ -0.5
CNOT7-204	ENST00000518885		Q8N9L7	120 aa		11.86	□□□□□ -0.51
CNOT7-204	ENST00000518885	LINC00846	Q9NV44	126 aa		11.85	□□□□□ -0.51
CNOT7-204	ENST00000518885	MT2A	P02795	61 aa		11.83	□□□□□ -0.52
CNOT7-204	ENST00000518885		F8W1H4	67 aa		11.82	□□□□□ -0.52
CNOT7-204	ENST00000518885	C7orf65	Q6ZTY9	151 aa		11.82	□□□□□ -0.52
CNOT7-204	ENST00000518885	HCG22	E2RYF7	251 aa		11.81	□□□□□ -0.52
CNOT7-204	ENST00000518885	CXCL6	P80162	114 aa		11.81	□□□□□ -0.52
CNOT7-204	ENST00000518885	IGKV2D-30	A0A075B6S6	120 aa		11.8	□□□□□ -0.52
CNOT7-204	ENST00000518885	IGKV2-30	P06310	120 aa		11.8	□□□□□ -0.52
CNOT7-204	ENST00000518885	PCP4L1	A6NKN8	68 aa		11.78	□□□□□ -0.52
CNOT7-204	ENST00000518885	KRTAP10-10	P60014	251 aa		11.78	□□□□□ -0.52
CNOT7-204	ENST00000518885	H1FX-AS1	Q4G0G2	97 aa		11.74	□□□□□ -0.53
CNOT7-204	ENST00000518885		Q5W150	140 aa		11.74	□□□□□ -0.53
CNOT7-204	ENST00000518885	MT1F	P04733	61 aa		11.71	□□□□□ -0.53
CNOT7-204	ENST00000518885	ETDB	Q3ZM63	59 aa		11.68	□□□□□ -0.54
CNOT7-204	ENST00000518885	TP53AIP1	Q9HCN2	124 aa		11.63	□□□□□ -0.55
CNOT7-204	ENST00000518885	USH2A	O75445	5202 aa		11.62	□□□□□ -0.55
CNOT7-204	ENST00000518885	KRTAP9-3	Q9BYQ3	159 aa		11.6	□□□□□ -0.55
CNOT7-204	ENST00000518885	ACYP1	P07311	99 aa		11.56	□□□□□ -0.56
CNOT7-204	ENST00000518885	C4orf26	Q17RF5	130 aa		11.55	□□□□□ -0.56
CNOT7-204	ENST00000518885	LCE2B	O14633	110 aa		11.5	□□□□□ -0.57
CNOT7-204	ENST00000518885	SSPO	A2VEC9	5147 aa		11.48	□□□□□ -0.57
CNOT7-204	ENST00000518885	FAM240A	A0A1B0GVK7	77 aa		11.45	□□□□□ -0.58
CNOT7-204	ENST00000518885	ATP5EP2	Q5VTU8	51 aa		11.45	□□□□□ -0.58
CNOT7-204	ENST00000518885	C1orf64	Q8NEQ6	169 aa		11.39	□□□□□ -0.59
CNOT7-204	ENST00000518885		S4R3F8	94 aa		11.36	□□□□□ -0.59
CNOT7-204	ENST00000518885	TRAV22	A0A0B4J277	110 aa		11.33	□□□□□ -0.6
CNOT7-204	ENST00000518885	HIST1H4A	P62805	103 aa	Known RBP	11.33	□□□□□ -0.6
CNOT7-204	ENST00000518885	KRTAP19-1	Q8IUB9	90 aa		11.33	□□□□□ -0.6
CNOT7-204	ENST00000518885	C5orf47	Q569G3	176 aa		11.31	□□□□□ -0.6
CNOT7-204	ENST00000518885	LOC101927531	A0A1B0GV80	90 aa		11.29	□□□□□ -0.6
CNOT7-204	ENST00000518885	CSAG1	Q6PB30	78 aa		11.29	□□□□□ -0.6
CNOT7-204	ENST00000518885	KRTAP3-1	Q9BYR8	98 aa		11.29	□□□□□ -0.6
CNOT7-204	ENST00000518885	CYP4F30P	Q9H0H9	118 aa		11.28	□□□□□ -0.6
CNOT7-204	ENST00000518885	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	11.26	□□□□□ -0.61
CNOT7-204	ENST00000518885	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	11.25	□□□□□ -0.61
CNOT7-204	ENST00000518885	FAM236A	A0A1B0GUQ0	79 aa		11.23	□□□□□ -0.61
CNOT7-204	ENST00000518885	FAM236B	A0A1B0GV22	79 aa		11.23	□□□□□ -0.61
CNOT7-204	ENST00000518885	ATOX1	O00244	68 aa		11.23	□□□□□ -0.61
CNOT7-204	ENST00000518885	UQCRQ	O14949	82 aa		11.23	□□□□□ -0.61
CNOT7-204	ENST00000518885	LINC00643	Q86TS7	51 aa		11.23	□□□□□ -0.61
CNOT7-204	ENST00000518885	LCA10	Q71F78	164 aa		11.21	□□□□□ -0.61
CNOT7-204	ENST00000518885	KRTAP19-6	Q3LI70	58 aa		11.16	□□□□□ -0.62
CNOT7-204	ENST00000518885		H0Y9P7	68 aa		11.14	□□□□□ -0.63
CNOT7-204	ENST00000518885	KRTAP9-7	A8MTY7	169 aa		11.12	□□□□□ -0.63
CNOT7-204	ENST00000518885		A0A1B0GV90	55 aa		11.1	□□□□□ -0.63
CNOT7-204	ENST00000518885		A0A087WVE0	104 aa		11.08	□□□□□ -0.64
CNOT7-204	ENST00000518885		J3QR89	54 aa		11.07	□□□□□ -0.64
CNOT7-204	ENST00000518885	MP68	P56378	58 aa		11	□□□□□ -0.65
CNOT7-204	ENST00000518885		A8MUN3	132 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms