RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ATP11AUNQ6ZP68 121 aa11.66□□□□□ -0.54
VEGFA-217ENST00000518538 A8MUU9 505 aa11.65□□□□□ -0.54
VEGFA-217ENST00000518538 IGHV6-1A0A0B4J1U7 121 aa11.64□□□□□ -0.55
VEGFA-217ENST00000518538 SMCPP49901 116 aaPredicted RBP11.64□□□□□ -0.55
VEGFA-217ENST00000518538 A0A1B0GVX0 72 aa11.62□□□□□ -0.55
VEGFA-217ENST00000518538 NOTCH2NLQ7Z3S9 236 aa11.62□□□□□ -0.55
VEGFA-217ENST00000518538 KRTAP16-1A8MUX0 517 aa11.61□□□□□ -0.55
VEGFA-217ENST00000518538 PRO0461Q9UI25 63 aa11.61□□□□□ -0.55
VEGFA-217ENST00000518538 FAT4Q6V0I7 4981 aa11.61□□□□□ -0.55
VEGFA-217ENST00000518538 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
VEGFA-217ENST00000518538 NREPQ16612 68 aa11.58□□□□□ -0.56
VEGFA-217ENST00000518538 LCE2AQ5TA79 106 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-217ENST00000518538 GTF2H5Q6ZYL4 71 aa11.58□□□□□ -0.56
VEGFA-217ENST00000518538 NDUFB1O75438 58 aa11.56□□□□□ -0.56
VEGFA-217ENST00000518538 A8MWP4 228 aa11.55□□□□□ -0.56
VEGFA-217ENST00000518538 KRTAP19-2Q3LHN2 52 aa11.5□□□□□ -0.57
VEGFA-217ENST00000518538 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
VEGFA-217ENST00000518538 F8W1H4 67 aa11.47□□□□□ -0.57
VEGFA-217ENST00000518538 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
VEGFA-217ENST00000518538 C8orf17Q9NRJ1 99 aa11.45□□□□□ -0.58
VEGFA-217ENST00000518538 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
VEGFA-217ENST00000518538 Q6ZVQ6 151 aa11.42□□□□□ -0.58
VEGFA-217ENST00000518538 BPY2O14599 106 aa11.4□□□□□ -0.58
VEGFA-217ENST00000518538 Q8N9P0 234 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-217ENST00000518538 K7EQZ3 153 aa11.37□□□□□ -0.59
VEGFA-217ENST00000518538 ETDBQ3ZM63 59 aa11.36□□□□□ -0.59
VEGFA-217ENST00000518538 COX6B2Q6YFQ2 88 aa11.35□□□□□ -0.59
VEGFA-217ENST00000518538 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
VEGFA-217ENST00000518538 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
VEGFA-217ENST00000518538 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
VEGFA-217ENST00000518538 MT1HP80294 61 aa11.32□□□□□ -0.6
VEGFA-217ENST00000518538 ZCCHC13Q8WW36 166 aaKnown RBP11.32□□□□□ -0.6
VEGFA-217ENST00000518538 TMEM254Q8TBM7 123 aa11.3□□□□□ -0.6
VEGFA-217ENST00000518538 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
VEGFA-217ENST00000518538 MRPL34Q9BQ48 92 aaKnown RBP11.28□□□□□ -0.6
VEGFA-217ENST00000518538 Q8N9L7 120 aa11.25□□□□□ -0.61
VEGFA-217ENST00000518538 HRES1P13985 223 aa11.18□□□□□ -0.62
VEGFA-217ENST00000518538 CASC2Q6XLA1 102 aa11.17□□□□□ -0.62
VEGFA-217ENST00000518538 WFDC13Q8IUB5 93 aa11.17□□□□□ -0.62
VEGFA-217ENST00000518538 NDUFS5O43920 106 aa11.16□□□□□ -0.62
VEGFA-217ENST00000518538 A0A1B0GV90 55 aa11.15□□□□□ -0.62
VEGFA-217ENST00000518538 SPINK7P58062 85 aa11.15□□□□□ -0.62
VEGFA-217ENST00000518538 MPLKIPQ8TAP9 179 aa11.15□□□□□ -0.62
VEGFA-217ENST00000518538 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
VEGFA-217ENST00000518538 M0R2T5 61 aa11.12□□□□□ -0.63
VEGFA-217ENST00000518538 CXCL6P80162 114 aa11.12□□□□□ -0.63
VEGFA-217ENST00000518538 ACYP1P07311 99 aa11.11□□□□□ -0.63
VEGFA-217ENST00000518538 HCG22E2RYF7 251 aa11.1□□□□□ -0.63
VEGFA-217ENST00000518538 FAM236DA0A1B0GTK5 79 aa11.09□□□□□ -0.63
VEGFA-217ENST00000518538 FAM240AA0A1B0GVK7 77 aa11.09□□□□□ -0.63
VEGFA-217ENST00000518538 FAM236CP0DP71 79 aa11.09□□□□□ -0.63
VEGFA-217ENST00000518538 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-217ENST00000518538 FLGP20930 4061 aaPredicted RBP11.04□□□□□ -0.64
VEGFA-217ENST00000518538 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-217ENST00000518538 Q5W150 140 aa11.02□□□□□ -0.65
VEGFA-217ENST00000518538 KRTAP9-2Q9BYQ4 174 aa11□□□□□ -0.65
VEGFA-217ENST00000518538 ATP5EP2Q5VTU8 51 aa10.96□□□□□ -0.65
VEGFA-217ENST00000518538 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
VEGFA-217ENST00000518538 IGKV2D-30A0A075B6S6 120 aa10.92□□□□□ -0.66
VEGFA-217ENST00000518538 IGKV2-30P06310 120 aa10.92□□□□□ -0.66
VEGFA-217ENST00000518538 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
VEGFA-217ENST00000518538 LCE2DQ5TA82 110 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-217ENST00000518538 LINC00643Q86TS7 51 aa10.85□□□□□ -0.67
VEGFA-217ENST00000518538 HIST1H4AP62805 103 aaKnown RBP10.83□□□□□ -0.68
VEGFA-217ENST00000518538 J3QR89 54 aa10.8□□□□□ -0.68
VEGFA-217ENST00000518538 KRTAP9-8Q9BYQ0 159 aa10.76□□□□□ -0.69
VEGFA-217ENST00000518538 H1FX-AS1Q4G0G2 97 aa10.73□□□□□ -0.69
VEGFA-217ENST00000518538 A0A087WVE0 104 aa10.7□□□□□ -0.7
VEGFA-217ENST00000518538 C4orf26Q17RF5 130 aa10.7□□□□□ -0.7
VEGFA-217ENST00000518538 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
VEGFA-217ENST00000518538 UQCRQO14949 82 aa10.64□□□□□ -0.71
VEGFA-217ENST00000518538 MT2AP02795 61 aa10.63□□□□□ -0.71
VEGFA-217ENST00000518538 CYP4F30PQ9H0H9 118 aa10.6□□□□□ -0.71
VEGFA-217ENST00000518538 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
VEGFA-217ENST00000518538 H0Y9P7 68 aa10.55□□□□□ -0.72
VEGFA-217ENST00000518538 ATOX1O00244 68 aa10.55□□□□□ -0.72
VEGFA-217ENST00000518538 MT1FP04733 61 aa10.55□□□□□ -0.72
VEGFA-217ENST00000518538 C1orf64Q8NEQ6 169 aa10.55□□□□□ -0.72
VEGFA-217ENST00000518538 KRTAP3-1Q9BYR8 98 aa10.55□□□□□ -0.72
VEGFA-217ENST00000518538 KRTAP9-6A0A140TA67 174 aa10.52□□□□□ -0.73
VEGFA-217ENST00000518538 K7ERU9 68 aa10.51□□□□□ -0.73
VEGFA-217ENST00000518538 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
VEGFA-217ENST00000518538 OCR1Q9BZK8 76 aa10.5□□□□□ -0.73
VEGFA-217ENST00000518538 CRCT1Q9UGL9 99 aa10.44□□□□□ -0.74
VEGFA-217ENST00000518538 S4R3F8 94 aa10.43□□□□□ -0.74
VEGFA-217ENST00000518538 IMUPQ9GZP8 106 aa10.42□□□□□ -0.74
VEGFA-217ENST00000518538 KRTAP9-3Q9BYQ3 159 aa10.41□□□□□ -0.74
VEGFA-217ENST00000518538 MP68P56378 58 aa10.4□□□□□ -0.74
VEGFA-217ENST00000518538 LINC00208Q96KT6 92 aa10.4□□□□□ -0.74
VEGFA-217ENST00000518538 SCGB1A1P11684 91 aa10.39□□□□□ -0.75
VEGFA-217ENST00000518538 MT-ATP8P03928 68 aa10.38□□□□□ -0.75
VEGFA-217ENST00000518538 C5orf47Q569G3 176 aa10.38□□□□□ -0.75
VEGFA-217ENST00000518538 LCA10Q71F78 164 aa10.36□□□□□ -0.75
VEGFA-217ENST00000518538 FSIP2Q5CZC0 6907 aa10.35□□□□□ -0.75
VEGFA-217ENST00000518538 H3BPC8 53 aa10.31□□□□□ -0.76
VEGFA-217ENST00000518538 CSAG1Q6PB30 78 aa10.31□□□□□ -0.76
VEGFA-217ENST00000518538 KLKP1Q107X0 134 aa10.3□□□□□ -0.76
VEGFA-217ENST00000518538 LCE2BO14633 110 aa10.28□□□□□ -0.76
VEGFA-217ENST00000518538 A8MUN3 132 aa10.24□□□□□ -0.77
VEGFA-217ENST00000518538 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms