RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 C9JAW5 83 aa8.78□□□□□ -1
DDX41-217ENST00000515562 J3KT08 172 aa8.78□□□□□ -1
DDX41-217ENST00000515562 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
DDX41-217ENST00000515562 BAALC-AS2P0C853 105 aa8.77□□□□□ -1.01
DDX41-217ENST00000515562 HRES1P13985 223 aa8.77□□□□□ -1.01
DDX41-217ENST00000515562 Q6ZQT0 140 aa8.73□□□□□ -1.01
DDX41-217ENST00000515562 M0R143 59 aa8.72□□□□□ -1.01
DDX41-217ENST00000515562 ATXN8Q156A1 80 aa8.71□□□□□ -1.02
DDX41-217ENST00000515562 JMJD7-PLA2G4BH0Y9G9 81 aa8.7□□□□□ -1.02
DDX41-217ENST00000515562 NDUFB1O75438 58 aa8.7□□□□□ -1.02
DDX41-217ENST00000515562 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
DDX41-217ENST00000515562 A0A1B0GW54 56 aa8.69□□□□□ -1.02
DDX41-217ENST00000515562 MTURNQ8N3F0 131 aa8.69□□□□□ -1.02
DDX41-217ENST00000515562 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
DDX41-217ENST00000515562 MT2AP02795 61 aa8.67□□□□□ -1.02
DDX41-217ENST00000515562 USH2AO75445 5202 aa8.66□□□□□ -1.02
DDX41-217ENST00000515562 PDE6GP18545 87 aa8.66□□□□□ -1.02
DDX41-217ENST00000515562 Q8N9P0 234 aaPredicted RBP8.65□□□□□ -1.02
DDX41-217ENST00000515562 NAA38Q9BRA0 125 aaKnown RBP8.65□□□□□ -1.02
DDX41-217ENST00000515562 A8MWP4 228 aa8.64□□□□□ -1.03
DDX41-217ENST00000515562 SPINK7P58062 85 aa8.64□□□□□ -1.03
DDX41-217ENST00000515562 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
DDX41-217ENST00000515562 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
DDX41-217ENST00000515562 LYRM7Q5U5X0 104 aa8.62□□□□□ -1.03
DDX41-217ENST00000515562 C8orf17Q9NRJ1 99 aa8.62□□□□□ -1.03
DDX41-217ENST00000515562 MT1FP04733 61 aa8.61□□□□□ -1.03
DDX41-217ENST00000515562 IGKV3D-7A0A0C4DH55 119 aa8.59□□□□□ -1.03
DDX41-217ENST00000515562 KRTAP9-7A8MTY7 169 aa8.59□□□□□ -1.03
DDX41-217ENST00000515562 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
DDX41-217ENST00000515562 SSPOA2VEC9 5147 aa8.59□□□□□ -1.03
DDX41-217ENST00000515562 SMIM6P0DI80 62 aa8.57□□□□□ -1.04
DDX41-217ENST00000515562 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
DDX41-217ENST00000515562 Q6ZVQ6 151 aa8.56□□□□□ -1.04
DDX41-217ENST00000515562 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.54□□□□□ -1.04
DDX41-217ENST00000515562 NREPQ16612 68 aa8.54□□□□□ -1.04
DDX41-217ENST00000515562 WFDC13Q8IUB5 93 aa8.54□□□□□ -1.04
DDX41-217ENST00000515562 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
DDX41-217ENST00000515562 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.05
DDX41-217ENST00000515562 LCE2BO14633 110 aa8.5□□□□□ -1.05
DDX41-217ENST00000515562 TSTD3H0UI37 97 aa8.49□□□□□ -1.05
DDX41-217ENST00000515562 TMEM254Q8TBM7 123 aa8.49□□□□□ -1.05
DDX41-217ENST00000515562 MMP24-AS1A0A0U1RRL7 71 aa8.48□□□□□ -1.05
DDX41-217ENST00000515562 BATFQ16520 125 aa8.48□□□□□ -1.05
DDX41-217ENST00000515562 MRPL34Q9BQ48 92 aaKnown RBP8.48□□□□□ -1.05
DDX41-217ENST00000515562 H3BT86 120 aa8.46□□□□□ -1.06
DDX41-217ENST00000515562 hDV103S1A0JD37 113 aa8.44□□□□□ -1.06
DDX41-217ENST00000515562 K7EQZ3 153 aa8.43□□□□□ -1.06
DDX41-217ENST00000515562 FCGBPQ9Y6R7 5405 aaPredicted RBP8.43□□□□□ -1.06
DDX41-217ENST00000515562 KRTAP19-1Q8IUB9 90 aa8.42□□□□□ -1.06
DDX41-217ENST00000515562 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
DDX41-217ENST00000515562 NDUFS5O43920 106 aa8.41□□□□□ -1.06
DDX41-217ENST00000515562 A0A1W2PPM0 123 aa8.39□□□□□ -1.07
DDX41-217ENST00000515562 BPY2O14599 106 aa8.38□□□□□ -1.07
DDX41-217ENST00000515562 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
DDX41-217ENST00000515562 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
DDX41-217ENST00000515562 C7orf65Q6ZTY9 151 aa8.33□□□□□ -1.08
DDX41-217ENST00000515562 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
DDX41-217ENST00000515562 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
DDX41-217ENST00000515562 LINC00846Q9NV44 126 aa8.32□□□□□ -1.08
DDX41-217ENST00000515562 CASC2Q6XLA1 102 aa8.29□□□□□ -1.08
DDX41-217ENST00000515562 Q5W150 140 aa8.27□□□□□ -1.09
DDX41-217ENST00000515562 Q8N9L7 120 aa8.27□□□□□ -1.09
DDX41-217ENST00000515562 KRTAP19-6Q3LI70 58 aa8.26□□□□□ -1.09
DDX41-217ENST00000515562 SPCS1Q9Y6A9 102 aa8.26□□□□□ -1.09
DDX41-217ENST00000515562 HCG22E2RYF7 251 aa8.25□□□□□ -1.09
DDX41-217ENST00000515562 LOC105371267A0A1B0GV96 52 aa8.23□□□□□ -1.09
DDX41-217ENST00000515562 CXCL6P80162 114 aa8.23□□□□□ -1.09
DDX41-217ENST00000515562 MACF1Q9UPN3 7388 aaKnown RBP8.22□□□□□ -1.09
DDX41-217ENST00000515562 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
DDX41-217ENST00000515562 UBL5Q9BZL1 73 aa8.19□□□□□ -1.1
DDX41-217ENST00000515562 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
DDX41-217ENST00000515562 SYNE2Q8WXH0 6885 aaKnown RBP8.14□□□□□ -1.11
DDX41-217ENST00000515562 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
DDX41-217ENST00000515562 PRO0461Q9UI25 63 aa8.12□□□□□ -1.11
DDX41-217ENST00000515562 K7EP34 96 aa8.1□□□□□ -1.11
DDX41-217ENST00000515562 C5orf47Q569G3 176 aa8.06□□□□□ -1.12
DDX41-217ENST00000515562 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
DDX41-217ENST00000515562 S4R3F8 94 aa8.04□□□□□ -1.12
DDX41-217ENST00000515562 FAM236AA0A1B0GUQ0 79 aa8.02□□□□□ -1.13
DDX41-217ENST00000515562 FAM236BA0A1B0GV22 79 aa8.02□□□□□ -1.13
DDX41-217ENST00000515562 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.13
DDX41-217ENST00000515562 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
DDX41-217ENST00000515562 GTF2H5Q6ZYL4 71 aa8□□□□□ -1.13
DDX41-217ENST00000515562 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
DDX41-217ENST00000515562 LCA10Q71F78 164 aa7.96□□□□□ -1.14
DDX41-217ENST00000515562 F8W1H4 67 aa7.95□□□□□ -1.14
DDX41-217ENST00000515562 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
DDX41-217ENST00000515562 ETDBQ3ZM63 59 aa7.92□□□□□ -1.14
DDX41-217ENST00000515562 Q5VV11 94 aa7.89□□□□□ -1.15
DDX41-217ENST00000515562 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
DDX41-217ENST00000515562 MT1BP07438 61 aa7.86□□□□□ -1.15
DDX41-217ENST00000515562 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
DDX41-217ENST00000515562 TRAV22A0A0B4J277 110 aa7.85□□□□□ -1.15
DDX41-217ENST00000515562 A6NN06 94 aa7.85□□□□□ -1.15
DDX41-217ENST00000515562 KRTAP19-8Q3LI54 63 aa7.85□□□□□ -1.15
DDX41-217ENST00000515562 KLKP1Q107X0 134 aa7.84□□□□□ -1.15
DDX41-217ENST00000515562 LOC101927531A0A1B0GV80 90 aa7.83□□□□□ -1.16
DDX41-217ENST00000515562 ACYP1P07311 99 aa7.8□□□□□ -1.16
DDX41-217ENST00000515562 ATP5EP2Q5VTU8 51 aa7.79□□□□□ -1.16
DDX41-217ENST00000515562 PCP4L1A6NKN8 68 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms