RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 JMJD7-PLA2G4BH0Y9G9 81 aa12.52□□□□□ -0.41
SNF8-213ENST00000514929 Q6ZQT0 140 aa12.51□□□□□ -0.41
SNF8-213ENST00000514929 J3KT08 172 aa12.5□□□□□ -0.41
SNF8-213ENST00000514929 TSTD3H0UI37 97 aa12.49□□□□□ -0.41
SNF8-213ENST00000514929 LYRM7Q5U5X0 104 aa12.48□□□□□ -0.41
SNF8-213ENST00000514929 BATFQ16520 125 aa12.46□□□□□ -0.41
SNF8-213ENST00000514929 LOC110117498A0A087WWA1 95 aa12.44□□□□□ -0.42
SNF8-213ENST00000514929 CRCT1Q9UGL9 99 aa12.43□□□□□ -0.42
SNF8-213ENST00000514929 FSIP2Q5CZC0 6907 aa12.43□□□□□ -0.42
SNF8-213ENST00000514929 A0A1B0GW54 56 aa12.42□□□□□ -0.42
SNF8-213ENST00000514929 NDUFB1O75438 58 aa12.42□□□□□ -0.42
SNF8-213ENST00000514929 PDE6GP18545 87 aa12.42□□□□□ -0.42
SNF8-213ENST00000514929 FAM236DA0A1B0GTK5 79 aa12.4□□□□□ -0.42
SNF8-213ENST00000514929 FAM236CP0DP71 79 aa12.4□□□□□ -0.42
SNF8-213ENST00000514929 C14orf132Q9NPU4 83 aa12.4□□□□□ -0.42
SNF8-213ENST00000514929 RBM12B-AS1Q9P1G2 102 aa12.36□□□□□ -0.43
SNF8-213ENST00000514929 HRES1P13985 223 aa12.34□□□□□ -0.43
SNF8-213ENST00000514929 A8MWP4 228 aa12.33□□□□□ -0.44
SNF8-213ENST00000514929 ZCCHC13Q8WW36 166 aaKnown RBP12.33□□□□□ -0.44
SNF8-213ENST00000514929 MPLKIPQ8TAP9 179 aa12.3□□□□□ -0.44
SNF8-213ENST00000514929 C8orf17Q9NRJ1 99 aa12.3□□□□□ -0.44
SNF8-213ENST00000514929 LOC105371267A0A1B0GV96 52 aa12.29□□□□□ -0.44
SNF8-213ENST00000514929 C9orf118A6NHY6 69 aa12.29□□□□□ -0.44
SNF8-213ENST00000514929 IGKV3D-7A0A0C4DH55 119 aa12.28□□□□□ -0.44
SNF8-213ENST00000514929 NREPQ16612 68 aa12.28□□□□□ -0.44
SNF8-213ENST00000514929 Q8N9P0 234 aaPredicted RBP12.28□□□□□ -0.44
SNF8-213ENST00000514929 H3BT86 120 aa12.25□□□□□ -0.45
SNF8-213ENST00000514929 TAX1BP3O14907 124 aa12.25□□□□□ -0.45
SNF8-213ENST00000514929 A0A1W2PPM0 123 aa12.24□□□□□ -0.45
SNF8-213ENST00000514929 SPINK7P58062 85 aa12.22□□□□□ -0.45
SNF8-213ENST00000514929 MTURNQ8N3F0 131 aa12.22□□□□□ -0.45
SNF8-213ENST00000514929 KRTAP9-8Q9BYQ0 159 aa12.22□□□□□ -0.45
SNF8-213ENST00000514929 PRR15Q8IV56 129 aa12.21□□□□□ -0.45
SNF8-213ENST00000514929 Q6ZVQ6 151 aa12.2□□□□□ -0.46
SNF8-213ENST00000514929 MMP24-AS1A0A0U1RRL7 71 aa12.11□□□□□ -0.47
SNF8-213ENST00000514929 TMEM254Q8TBM7 123 aa12.11□□□□□ -0.47
SNF8-213ENST00000514929 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
SNF8-213ENST00000514929 SPCS1Q9Y6A9 102 aa12.09□□□□□ -0.47
SNF8-213ENST00000514929 K7EQZ3 153 aa12.08□□□□□ -0.48
SNF8-213ENST00000514929 MT2AP02795 61 aa12.06□□□□□ -0.48
SNF8-213ENST00000514929 WFDC13Q8IUB5 93 aa12.06□□□□□ -0.48
SNF8-213ENST00000514929 hDV103S1A0JD37 113 aa12.05□□□□□ -0.48
SNF8-213ENST00000514929 BPY2O14599 106 aa12.05□□□□□ -0.48
SNF8-213ENST00000514929 NDUFS5O43920 106 aa12.03□□□□□ -0.48
SNF8-213ENST00000514929 COL5A1-AS1Q5SY13 56 aa11.97□□□□□ -0.49
SNF8-213ENST00000514929 SMCPP49901 116 aaPredicted RBP11.96□□□□□ -0.49
SNF8-213ENST00000514929 MT1FP04733 61 aa11.95□□□□□ -0.5
SNF8-213ENST00000514929 KRTAP10-10P60014 251 aa11.94□□□□□ -0.5
SNF8-213ENST00000514929 Q8N9L7 120 aa11.92□□□□□ -0.5
SNF8-213ENST00000514929 CASC2Q6XLA1 102 aa11.88□□□□□ -0.51
SNF8-213ENST00000514929 PRO0461Q9UI25 63 aa11.87□□□□□ -0.51
SNF8-213ENST00000514929 USH2AO75445 5202 aa11.87□□□□□ -0.51
SNF8-213ENST00000514929 K7EP34 96 aa11.86□□□□□ -0.51
SNF8-213ENST00000514929 IGKV2D-30A0A075B6S6 120 aa11.84□□□□□ -0.51
SNF8-213ENST00000514929 IGKV2-30P06310 120 aa11.84□□□□□ -0.51
SNF8-213ENST00000514929 UBL5Q9BZL1 73 aa11.84□□□□□ -0.51
SNF8-213ENST00000514929 Q5W150 140 aa11.83□□□□□ -0.52
SNF8-213ENST00000514929 KRTAP9-3Q9BYQ3 159 aa11.83□□□□□ -0.52
SNF8-213ENST00000514929 HCG22E2RYF7 251 aa11.82□□□□□ -0.52
SNF8-213ENST00000514929 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
SNF8-213ENST00000514929 C7orf65Q6ZTY9 151 aa11.81□□□□□ -0.52
SNF8-213ENST00000514929 LCE2BO14633 110 aa11.78□□□□□ -0.52
SNF8-213ENST00000514929 H1FX-AS1Q4G0G2 97 aa11.78□□□□□ -0.52
SNF8-213ENST00000514929 SSPOA2VEC9 5147 aa11.75□□□□□ -0.53
SNF8-213ENST00000514929 CXCL6P80162 114 aa11.74□□□□□ -0.53
SNF8-213ENST00000514929 GTF2H5Q6ZYL4 71 aa11.73□□□□□ -0.53
SNF8-213ENST00000514929 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
SNF8-213ENST00000514929 F8W1H4 67 aa11.65□□□□□ -0.54
SNF8-213ENST00000514929 C4orf26Q17RF5 130 aa11.63□□□□□ -0.55
SNF8-213ENST00000514929 ETDBQ3ZM63 59 aa11.61□□□□□ -0.55
SNF8-213ENST00000514929 KRTAP19-1Q8IUB9 90 aa11.6□□□□□ -0.55
SNF8-213ENST00000514929 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.56□□□□□ -0.56
SNF8-213ENST00000514929 FCGBPQ9Y6R7 5405 aaPredicted RBP11.51□□□□□ -0.57
SNF8-213ENST00000514929 TP53AIP1Q9HCN2 124 aa11.51□□□□□ -0.57
SNF8-213ENST00000514929 KRTAP9-7A8MTY7 169 aa11.43□□□□□ -0.58
SNF8-213ENST00000514929 C1orf64Q8NEQ6 169 aa11.42□□□□□ -0.58
SNF8-213ENST00000514929 C5orf47Q569G3 176 aa11.41□□□□□ -0.58
SNF8-213ENST00000514929 KRTAP3-1Q9BYR8 98 aa11.41□□□□□ -0.58
SNF8-213ENST00000514929 S4R3F8 94 aa11.38□□□□□ -0.59
SNF8-213ENST00000514929 KRTAP19-6Q3LI70 58 aa11.37□□□□□ -0.59
SNF8-213ENST00000514929 ACYP1P07311 99 aa11.36□□□□□ -0.59
SNF8-213ENST00000514929 CSAG1Q6PB30 78 aa11.3□□□□□ -0.6
SNF8-213ENST00000514929 LCA10Q71F78 164 aa11.29□□□□□ -0.6
SNF8-213ENST00000514929 FAM236AA0A1B0GUQ0 79 aa11.28□□□□□ -0.6
SNF8-213ENST00000514929 FAM236BA0A1B0GV22 79 aa11.28□□□□□ -0.6
SNF8-213ENST00000514929 FAM240AA0A1B0GVK7 77 aa11.28□□□□□ -0.6
SNF8-213ENST00000514929 CYP4F30PQ9H0H9 118 aa11.27□□□□□ -0.61
SNF8-213ENST00000514929 TRAV22A0A0B4J277 110 aa11.26□□□□□ -0.61
SNF8-213ENST00000514929 ATP5EP2Q5VTU8 51 aa11.26□□□□□ -0.61
SNF8-213ENST00000514929 HIST1H4AP62805 103 aaKnown RBP11.24□□□□□ -0.61
SNF8-213ENST00000514929 LOC101927531A0A1B0GV80 90 aa11.21□□□□□ -0.61
SNF8-213ENST00000514929 MACF1Q9UPN3 7388 aaKnown RBP11.17□□□□□ -0.62
SNF8-213ENST00000514929 UQCRQO14949 82 aa11.13□□□□□ -0.63
SNF8-213ENST00000514929 H0Y9P7 68 aa11.1□□□□□ -0.63
SNF8-213ENST00000514929 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
SNF8-213ENST00000514929 ATOX1O00244 68 aa11.09□□□□□ -0.63
SNF8-213ENST00000514929 LINC00643Q86TS7 51 aa11.08□□□□□ -0.64
SNF8-213ENST00000514929 A0A087WVE0 104 aa11.06□□□□□ -0.64
SNF8-213ENST00000514929 SPRR2GQ9BYE4 73 aa11.03□□□□□ -0.64
SNF8-213ENST00000514929 KLKP1Q107X0 134 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms