RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 BAALC-AS2P0C853 105 aa5.25□□□□□ -1.57
HMGXB3-205ENST00000514469 J3KT08 172 aa5.24□□□□□ -1.57
HMGXB3-205ENST00000514469 Q6ZQT0 140 aa5.24□□□□□ -1.57
HMGXB3-205ENST00000514469 FAM236DA0A1B0GTK5 79 aa5.23□□□□□ -1.57
HMGXB3-205ENST00000514469 M0R143 59 aa5.23□□□□□ -1.57
HMGXB3-205ENST00000514469 FAM236CP0DP71 79 aa5.23□□□□□ -1.57
HMGXB3-205ENST00000514469 ATXN8Q156A1 80 aa5.23□□□□□ -1.57
HMGXB3-205ENST00000514469 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
HMGXB3-205ENST00000514469 LOC110117498A0A087WWA1 95 aa5.21□□□□□ -1.58
HMGXB3-205ENST00000514469 ZCCHC13Q8WW36 166 aaKnown RBP5.21□□□□□ -1.58
HMGXB3-205ENST00000514469 NAA38Q9BRA0 125 aaKnown RBP5.21□□□□□ -1.58
HMGXB3-205ENST00000514469 USH2AO75445 5202 aa5.21□□□□□ -1.58
HMGXB3-205ENST00000514469 A0A1B0GW54 56 aa5.2□□□□□ -1.58
HMGXB3-205ENST00000514469 JMJD7-PLA2G4BH0Y9G9 81 aa5.2□□□□□ -1.58
HMGXB3-205ENST00000514469 MT2AP02795 61 aa5.19□□□□□ -1.58
HMGXB3-205ENST00000514469 SMIM6P0DI80 62 aa5.19□□□□□ -1.58
HMGXB3-205ENST00000514469 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
HMGXB3-205ENST00000514469 NDUFB1O75438 58 aa5.18□□□□□ -1.58
HMGXB3-205ENST00000514469 A8MWP4 228 aa5.17□□□□□ -1.58
HMGXB3-205ENST00000514469 PDE6GP18545 87 aa5.17□□□□□ -1.58
HMGXB3-205ENST00000514469 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
HMGXB3-205ENST00000514469 SSPOA2VEC9 5147 aa5.17□□□□□ -1.58
HMGXB3-205ENST00000514469 C14orf132Q9NPU4 83 aa5.16□□□□□ -1.58
HMGXB3-205ENST00000514469 IGKV3D-7A0A0C4DH55 119 aa5.15□□□□□ -1.59
HMGXB3-205ENST00000514469 MT1FP04733 61 aa5.15□□□□□ -1.59
HMGXB3-205ENST00000514469 SPINK7P58062 85 aa5.15□□□□□ -1.59
HMGXB3-205ENST00000514469 LYRM7Q5U5X0 104 aa5.15□□□□□ -1.59
HMGXB3-205ENST00000514469 MTURNQ8N3F0 131 aa5.14□□□□□ -1.59
HMGXB3-205ENST00000514469 Q6ZVQ6 151 aa5.12□□□□□ -1.59
HMGXB3-205ENST00000514469 PRR15Q8IV56 129 aa5.12□□□□□ -1.59
HMGXB3-205ENST00000514469 TSTD3H0UI37 97 aa5.11□□□□□ -1.59
HMGXB3-205ENST00000514469 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
HMGXB3-205ENST00000514469 BATFQ16520 125 aa5.1□□□□□ -1.59
HMGXB3-205ENST00000514469 NREPQ16612 68 aa5.1□□□□□ -1.59
HMGXB3-205ENST00000514469 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
HMGXB3-205ENST00000514469 H3BT86 120 aa5.09□□□□□ -1.59
HMGXB3-205ENST00000514469 LCE2BO14633 110 aa5.09□□□□□ -1.59
HMGXB3-205ENST00000514469 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
HMGXB3-205ENST00000514469 WFDC13Q8IUB5 93 aa5.09□□□□□ -1.59
HMGXB3-205ENST00000514469 TMEM254Q8TBM7 123 aa5.09□□□□□ -1.59
HMGXB3-205ENST00000514469 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
HMGXB3-205ENST00000514469 MRPL34Q9BQ48 92 aaKnown RBP5.07□□□□□ -1.6
HMGXB3-205ENST00000514469 A0A1W2PPM0 123 aa5.06□□□□□ -1.6
HMGXB3-205ENST00000514469 K7EQZ3 153 aa5.06□□□□□ -1.6
HMGXB3-205ENST00000514469 TAX1BP3O14907 124 aa5.06□□□□□ -1.6
HMGXB3-205ENST00000514469 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
HMGXB3-205ENST00000514469 hDV103S1A0JD37 113 aa5.04□□□□□ -1.6
HMGXB3-205ENST00000514469 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
HMGXB3-205ENST00000514469 LOC105371267A0A1B0GV96 52 aa5.02□□□□□ -1.61
HMGXB3-205ENST00000514469 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
HMGXB3-205ENST00000514469 BPY2O14599 106 aa5.01□□□□□ -1.61
HMGXB3-205ENST00000514469 NDUFS5O43920 106 aa5.01□□□□□ -1.61
HMGXB3-205ENST00000514469 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
HMGXB3-205ENST00000514469 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
HMGXB3-205ENST00000514469 Q5W150 140 aa4.97□□□□□ -1.61
HMGXB3-205ENST00000514469 C7orf65Q6ZTY9 151 aa4.97□□□□□ -1.61
HMGXB3-205ENST00000514469 Q8N9L7 120 aa4.97□□□□□ -1.61
HMGXB3-205ENST00000514469 SPCS1Q9Y6A9 102 aa4.97□□□□□ -1.61
HMGXB3-205ENST00000514469 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
HMGXB3-205ENST00000514469 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
HMGXB3-205ENST00000514469 SMCPP49901 116 aaPredicted RBP4.96□□□□□ -1.62
HMGXB3-205ENST00000514469 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
HMGXB3-205ENST00000514469 HCG22E2RYF7 251 aa4.93□□□□□ -1.62
HMGXB3-205ENST00000514469 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
HMGXB3-205ENST00000514469 PRO0461Q9UI25 63 aa4.93□□□□□ -1.62
HMGXB3-205ENST00000514469 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
HMGXB3-205ENST00000514469 CXCL6P80162 114 aa4.91□□□□□ -1.62
HMGXB3-205ENST00000514469 LINC00846Q9NV44 126 aa4.91□□□□□ -1.62
HMGXB3-205ENST00000514469 K7EP34 96 aa4.9□□□□□ -1.63
HMGXB3-205ENST00000514469 COL5A1-AS1Q5SY13 56 aa4.9□□□□□ -1.63
HMGXB3-205ENST00000514469 UBL5Q9BZL1 73 aa4.9□□□□□ -1.63
HMGXB3-205ENST00000514469 C4orf26Q17RF5 130 aa4.88□□□□□ -1.63
HMGXB3-205ENST00000514469 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
HMGXB3-205ENST00000514469 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
HMGXB3-205ENST00000514469 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
HMGXB3-205ENST00000514469 GTF2H5Q6ZYL4 71 aa4.8□□□□□ -1.64
HMGXB3-205ENST00000514469 TP53AIP1Q9HCN2 124 aa4.8□□□□□ -1.64
HMGXB3-205ENST00000514469 S4R3F8 94 aa4.8□□□□□ -1.64
HMGXB3-205ENST00000514469 F8W1H4 67 aa4.78□□□□□ -1.64
HMGXB3-205ENST00000514469 C1orf64Q8NEQ6 169 aa4.78□□□□□ -1.64
HMGXB3-205ENST00000514469 ETDBQ3ZM63 59 aa4.77□□□□□ -1.65
HMGXB3-205ENST00000514469 LCA10Q71F78 164 aa4.77□□□□□ -1.65
HMGXB3-205ENST00000514469 FAM236AA0A1B0GUQ0 79 aa4.75□□□□□ -1.65
HMGXB3-205ENST00000514469 FAM236BA0A1B0GV22 79 aa4.75□□□□□ -1.65
HMGXB3-205ENST00000514469 CSAG1Q6PB30 78 aa4.74□□□□□ -1.65
HMGXB3-205ENST00000514469 MT1BP07438 61 aa4.72□□□□□ -1.65
HMGXB3-205ENST00000514469 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
HMGXB3-205ENST00000514469 TRAV22A0A0B4J277 110 aa4.71□□□□□ -1.66
HMGXB3-205ENST00000514469 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
HMGXB3-205ENST00000514469 KRTAP3-3Q9BYR6 98 aa4.71□□□□□ -1.66
HMGXB3-205ENST00000514469 CYP4F30PQ9H0H9 118 aa4.71□□□□□ -1.66
HMGXB3-205ENST00000514469 PCP4L1A6NKN8 68 aa4.7□□□□□ -1.66
HMGXB3-205ENST00000514469 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
HMGXB3-205ENST00000514469 Q5VV11 94 aa4.69□□□□□ -1.66
HMGXB3-205ENST00000514469 LOC101927531A0A1B0GV80 90 aa4.68□□□□□ -1.66
HMGXB3-205ENST00000514469 ACYP1P07311 99 aa4.68□□□□□ -1.66
HMGXB3-205ENST00000514469 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
HMGXB3-205ENST00000514469 ATP5EP2Q5VTU8 51 aa4.68□□□□□ -1.66
HMGXB3-205ENST00000514469 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
HMGXB3-205ENST00000514469 A0A087WVE0 104 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms