RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SCGB1C2P0DMR2 95 aa5.18□□□□□ -1.58
DDX41-211ENST00000510171 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
DDX41-211ENST00000510171 C21orf62-AS1Q17RA5 79 aa5.18□□□□□ -1.58
DDX41-211ENST00000510171 DSCR8Q96T75 97 aa5.18□□□□□ -1.58
DDX41-211ENST00000510171 LINC00846Q9NV44 126 aa5.18□□□□□ -1.58
DDX41-211ENST00000510171 IGHV6-1A0A0B4J1U7 121 aa5.17□□□□□ -1.58
DDX41-211ENST00000510171 DEFB116Q30KQ4 102 aa5.17□□□□□ -1.58
DDX41-211ENST00000510171 VPS25Q9BRG1 176 aa5.16□□□□□ -1.58
DDX41-211ENST00000510171 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
DDX41-211ENST00000510171 C8orf87E5RJ46 101 aa5.15□□□□□ -1.59
DDX41-211ENST00000510171 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.59
DDX41-211ENST00000510171 MPLKIPQ8TAP9 179 aa5.15□□□□□ -1.59
DDX41-211ENST00000510171 A0A1B0GVX0 72 aa5.14□□□□□ -1.59
DDX41-211ENST00000510171 C9JAW5 83 aa5.14□□□□□ -1.59
DDX41-211ENST00000510171 J3KT08 172 aa5.14□□□□□ -1.59
DDX41-211ENST00000510171 BAALC-AS2P0C853 105 aa5.14□□□□□ -1.59
DDX41-211ENST00000510171 HRES1P13985 223 aa5.14□□□□□ -1.59
DDX41-211ENST00000510171 M0R143 59 aa5.11□□□□□ -1.59
DDX41-211ENST00000510171 A0A1B0GW54 56 aa5.1□□□□□ -1.59
DDX41-211ENST00000510171 JMJD7-PLA2G4BH0Y9G9 81 aa5.1□□□□□ -1.59
DDX41-211ENST00000510171 ATXN8Q156A1 80 aa5.1□□□□□ -1.59
DDX41-211ENST00000510171 KRTAP19-6Q3LI70 58 aa5.1□□□□□ -1.59
DDX41-211ENST00000510171 Q6ZQT0 140 aa5.1□□□□□ -1.59
DDX41-211ENST00000510171 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
DDX41-211ENST00000510171 NDUFB1O75438 58 aa5.09□□□□□ -1.59
DDX41-211ENST00000510171 MTURNQ8N3F0 131 aa5.09□□□□□ -1.59
DDX41-211ENST00000510171 PDE6GP18545 87 aa5.08□□□□□ -1.6
DDX41-211ENST00000510171 MACF1Q9UPN3 7388 aaKnown RBP5.08□□□□□ -1.6
DDX41-211ENST00000510171 LOC110117498A0A087WWA1 95 aa5.07□□□□□ -1.6
DDX41-211ENST00000510171 ZCCHC13Q8WW36 166 aaKnown RBP5.07□□□□□ -1.6
DDX41-211ENST00000510171 LYRM7Q5U5X0 104 aa5.06□□□□□ -1.6
DDX41-211ENST00000510171 A8MWP4 228 aa5.05□□□□□ -1.6
DDX41-211ENST00000510171 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
DDX41-211ENST00000510171 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
DDX41-211ENST00000510171 NAA38Q9BRA0 125 aaKnown RBP5.04□□□□□ -1.6
DDX41-211ENST00000510171 SMIM6P0DI80 62 aa5.03□□□□□ -1.6
DDX41-211ENST00000510171 SPINK7P58062 85 aa5.03□□□□□ -1.6
DDX41-211ENST00000510171 C14orf132Q9NPU4 83 aa5.02□□□□□ -1.61
DDX41-211ENST00000510171 C8orf17Q9NRJ1 99 aa5.02□□□□□ -1.61
DDX41-211ENST00000510171 IGKV3D-7A0A0C4DH55 119 aa5□□□□□ -1.61
DDX41-211ENST00000510171 TSTD3H0UI37 97 aa4.99□□□□□ -1.61
DDX41-211ENST00000510171 NREPQ16612 68 aa4.99□□□□□ -1.61
DDX41-211ENST00000510171 Q6ZVQ6 151 aa4.99□□□□□ -1.61
DDX41-211ENST00000510171 PRR15Q8IV56 129 aa4.99□□□□□ -1.61
DDX41-211ENST00000510171 BATFQ16520 125 aa4.96□□□□□ -1.62
DDX41-211ENST00000510171 WFDC13Q8IUB5 93 aa4.96□□□□□ -1.62
DDX41-211ENST00000510171 TMEM254Q8TBM7 123 aa4.96□□□□□ -1.62
DDX41-211ENST00000510171 H3BT86 120 aa4.95□□□□□ -1.62
DDX41-211ENST00000510171 LOC105371267A0A1B0GV96 52 aa4.94□□□□□ -1.62
DDX41-211ENST00000510171 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
DDX41-211ENST00000510171 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
DDX41-211ENST00000510171 C9orf118A6NHY6 69 aa4.93□□□□□ -1.62
DDX41-211ENST00000510171 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
DDX41-211ENST00000510171 A0A1W2PPM0 123 aa4.91□□□□□ -1.62
DDX41-211ENST00000510171 K7EQZ3 153 aa4.91□□□□□ -1.62
DDX41-211ENST00000510171 NDUFS5O43920 106 aa4.91□□□□□ -1.62
DDX41-211ENST00000510171 BPY2O14599 106 aa4.9□□□□□ -1.63
DDX41-211ENST00000510171 TAX1BP3O14907 124 aa4.89□□□□□ -1.63
DDX41-211ENST00000510171 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
DDX41-211ENST00000510171 C7orf65Q6ZTY9 151 aa4.85□□□□□ -1.63
DDX41-211ENST00000510171 IGKV2D-30A0A075B6S6 120 aa4.84□□□□□ -1.63
DDX41-211ENST00000510171 IGKV2-30P06310 120 aa4.84□□□□□ -1.63
DDX41-211ENST00000510171 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
DDX41-211ENST00000510171 SPCS1Q9Y6A9 102 aa4.84□□□□□ -1.63
DDX41-211ENST00000510171 CXCL6P80162 114 aa4.82□□□□□ -1.64
DDX41-211ENST00000510171 Q5W150 140 aa4.82□□□□□ -1.64
DDX41-211ENST00000510171 Q8N9L7 120 aa4.82□□□□□ -1.64
DDX41-211ENST00000510171 NEBP20929 6669 aa4.81□□□□□ -1.64
DDX41-211ENST00000510171 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
DDX41-211ENST00000510171 A6NN06 94 aa4.8□□□□□ -1.64
DDX41-211ENST00000510171 UBL5Q9BZL1 73 aa4.8□□□□□ -1.64
DDX41-211ENST00000510171 SMCPP49901 116 aaPredicted RBP4.79□□□□□ -1.64
DDX41-211ENST00000510171 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
DDX41-211ENST00000510171 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
DDX41-211ENST00000510171 C4orf26Q17RF5 130 aa4.76□□□□□ -1.65
DDX41-211ENST00000510171 PRO0461Q9UI25 63 aa4.75□□□□□ -1.65
DDX41-211ENST00000510171 K7EP34 96 aa4.74□□□□□ -1.65
DDX41-211ENST00000510171 Q5VV11 94 aa4.73□□□□□ -1.65
DDX41-211ENST00000510171 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
DDX41-211ENST00000510171 FAM236AA0A1B0GUQ0 79 aa4.72□□□□□ -1.65
DDX41-211ENST00000510171 FAM236BA0A1B0GV22 79 aa4.72□□□□□ -1.65
DDX41-211ENST00000510171 MT1BP07438 61 aa4.72□□□□□ -1.65
DDX41-211ENST00000510171 PCP4L1A6NKN8 68 aa4.71□□□□□ -1.66
DDX41-211ENST00000510171 TP53AIP1Q9HCN2 124 aa4.71□□□□□ -1.66
DDX41-211ENST00000510171 C5orf47Q569G3 176 aa4.7□□□□□ -1.66
DDX41-211ENST00000510171 GTF2H5Q6ZYL4 71 aa4.7□□□□□ -1.66
DDX41-211ENST00000510171 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
DDX41-211ENST00000510171 F8W1H4 67 aa4.68□□□□□ -1.66
DDX41-211ENST00000510171 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
DDX41-211ENST00000510171 C1orf64Q8NEQ6 169 aa4.68□□□□□ -1.66
DDX41-211ENST00000510171 S4R3F8 94 aa4.68□□□□□ -1.66
DDX41-211ENST00000510171 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
DDX41-211ENST00000510171 CSAG1Q6PB30 78 aa4.67□□□□□ -1.66
DDX41-211ENST00000510171 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
DDX41-211ENST00000510171 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
DDX41-211ENST00000510171 ETDBQ3ZM63 59 aa4.64□□□□□ -1.67
DDX41-211ENST00000510171 LCA10Q71F78 164 aa4.63□□□□□ -1.67
DDX41-211ENST00000510171 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
DDX41-211ENST00000510171 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
DDX41-211ENST00000510171 KMT2DO14686 5537 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms