RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 C9JAW5 83 aa11.09□□□□□ -0.63
PACRGL-220ENST00000508952 C8orf87E5RJ46 101 aa11.09□□□□□ -0.63
PACRGL-220ENST00000508952 HRES1P13985 223 aa11.09□□□□□ -0.63
PACRGL-220ENST00000508952 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
PACRGL-220ENST00000508952 MPLKIPQ8TAP9 179 aa11.06□□□□□ -0.64
PACRGL-220ENST00000508952 Q6ZQT0 140 aa11.04□□□□□ -0.64
PACRGL-220ENST00000508952 RBM12B-AS1Q9P1G2 102 aa11.04□□□□□ -0.64
PACRGL-220ENST00000508952 J3KT08 172 aa11.03□□□□□ -0.64
PACRGL-220ENST00000508952 M0R143 59 aa11.03□□□□□ -0.64
PACRGL-220ENST00000508952 ATXN8Q156A1 80 aa11.02□□□□□ -0.65
PACRGL-220ENST00000508952 C21orf62-AS1Q17RA5 79 aa11.02□□□□□ -0.65
PACRGL-220ENST00000508952 ZCCHC13Q8WW36 166 aaKnown RBP10.98□□□□□ -0.65
PACRGL-220ENST00000508952 JMJD7-PLA2G4BH0Y9G9 81 aa10.96□□□□□ -0.65
PACRGL-220ENST00000508952 USH2AO75445 5202 aa10.96□□□□□ -0.66
PACRGL-220ENST00000508952 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
PACRGL-220ENST00000508952 NDUFB1O75438 58 aa10.95□□□□□ -0.66
PACRGL-220ENST00000508952 MT2AP02795 61 aa10.95□□□□□ -0.66
PACRGL-220ENST00000508952 C14orf132Q9NPU4 83 aa10.92□□□□□ -0.66
PACRGL-220ENST00000508952 A8MWP4 228 aa10.91□□□□□ -0.66
PACRGL-220ENST00000508952 Q8N9P0 234 aaPredicted RBP10.91□□□□□ -0.66
PACRGL-220ENST00000508952 LCE2BO14633 110 aa10.9□□□□□ -0.66
PACRGL-220ENST00000508952 SPINK7P58062 85 aa10.9□□□□□ -0.66
PACRGL-220ENST00000508952 C8orf17Q9NRJ1 99 aa10.9□□□□□ -0.66
PACRGL-220ENST00000508952 IGKV3D-7A0A0C4DH55 119 aa10.89□□□□□ -0.67
PACRGL-220ENST00000508952 A0A1B0GW54 56 aa10.89□□□□□ -0.67
PACRGL-220ENST00000508952 SMIM6P0DI80 62 aa10.89□□□□□ -0.67
PACRGL-220ENST00000508952 PDE6GP18545 87 aa10.88□□□□□ -0.67
PACRGL-220ENST00000508952 SSPOA2VEC9 5147 aa10.88□□□□□ -0.67
PACRGL-220ENST00000508952 MT1FP04733 61 aa10.87□□□□□ -0.67
PACRGL-220ENST00000508952 MTURNQ8N3F0 131 aa10.85□□□□□ -0.67
PACRGL-220ENST00000508952 BATFQ16520 125 aa10.84□□□□□ -0.67
PACRGL-220ENST00000508952 LYRM7Q5U5X0 104 aa10.84□□□□□ -0.67
PACRGL-220ENST00000508952 Q6ZVQ6 151 aa10.81□□□□□ -0.68
PACRGL-220ENST00000508952 KRTAP10-10P60014 251 aa10.8□□□□□ -0.68
PACRGL-220ENST00000508952 NREPQ16612 68 aa10.8□□□□□ -0.68
PACRGL-220ENST00000508952 PRR15Q8IV56 129 aa10.8□□□□□ -0.68
PACRGL-220ENST00000508952 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
PACRGL-220ENST00000508952 WFDC13Q8IUB5 93 aa10.78□□□□□ -0.68
PACRGL-220ENST00000508952 KRTAP9-3Q9BYQ3 159 aa10.76□□□□□ -0.69
PACRGL-220ENST00000508952 MMP24-AS1A0A0U1RRL7 71 aa10.74□□□□□ -0.69
PACRGL-220ENST00000508952 C9orf118A6NHY6 69 aa10.71□□□□□ -0.69
PACRGL-220ENST00000508952 TMEM254Q8TBM7 123 aa10.71□□□□□ -0.69
PACRGL-220ENST00000508952 MRPL34Q9BQ48 92 aaKnown RBP10.71□□□□□ -0.69
PACRGL-220ENST00000508952 H3BT86 120 aa10.69□□□□□ -0.7
PACRGL-220ENST00000508952 K7EQZ3 153 aa10.69□□□□□ -0.7
PACRGL-220ENST00000508952 TAX1BP3O14907 124 aa10.68□□□□□ -0.7
PACRGL-220ENST00000508952 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
PACRGL-220ENST00000508952 hDV103S1A0JD37 113 aa10.66□□□□□ -0.7
PACRGL-220ENST00000508952 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.66□□□□□ -0.7
PACRGL-220ENST00000508952 NDUFS5O43920 106 aa10.64□□□□□ -0.71
PACRGL-220ENST00000508952 FCGBPQ9Y6R7 5405 aaPredicted RBP10.63□□□□□ -0.71
PACRGL-220ENST00000508952 KRTAP19-1Q8IUB9 90 aa10.61□□□□□ -0.71
PACRGL-220ENST00000508952 LOC105371267A0A1B0GV96 52 aa10.59□□□□□ -0.71
PACRGL-220ENST00000508952 BPY2O14599 106 aa10.59□□□□□ -0.71
PACRGL-220ENST00000508952 KRTAP9-7A8MTY7 169 aa10.56□□□□□ -0.72
PACRGL-220ENST00000508952 Q8N9L7 120 aa10.55□□□□□ -0.72
PACRGL-220ENST00000508952 IGKV2D-30A0A075B6S6 120 aa10.53□□□□□ -0.72
PACRGL-220ENST00000508952 IGKV2-30P06310 120 aa10.53□□□□□ -0.72
PACRGL-220ENST00000508952 Q5W150 140 aa10.53□□□□□ -0.72
PACRGL-220ENST00000508952 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
PACRGL-220ENST00000508952 SPCS1Q9Y6A9 102 aa10.52□□□□□ -0.73
PACRGL-220ENST00000508952 SMCPP49901 116 aaPredicted RBP10.48□□□□□ -0.73
PACRGL-220ENST00000508952 CASC2Q6XLA1 102 aa10.48□□□□□ -0.73
PACRGL-220ENST00000508952 C7orf65Q6ZTY9 151 aa10.47□□□□□ -0.73
PACRGL-220ENST00000508952 HCG22E2RYF7 251 aa10.45□□□□□ -0.74
PACRGL-220ENST00000508952 LINC00846Q9NV44 126 aa10.38□□□□□ -0.75
PACRGL-220ENST00000508952 PRO0461Q9UI25 63 aa10.37□□□□□ -0.75
PACRGL-220ENST00000508952 C4orf26Q17RF5 130 aa10.36□□□□□ -0.75
PACRGL-220ENST00000508952 KRTAP19-6Q3LI70 58 aa10.36□□□□□ -0.75
PACRGL-220ENST00000508952 CXCL6P80162 114 aa10.35□□□□□ -0.75
PACRGL-220ENST00000508952 COL5A1-AS1Q5SY13 56 aa10.34□□□□□ -0.75
PACRGL-220ENST00000508952 UBL5Q9BZL1 73 aa10.34□□□□□ -0.75
PACRGL-220ENST00000508952 MACF1Q9UPN3 7388 aaKnown RBP10.32□□□□□ -0.76
PACRGL-220ENST00000508952 K7EP34 96 aa10.31□□□□□ -0.76
PACRGL-220ENST00000508952 KRTAP3-1Q9BYR8 98 aa10.21□□□□□ -0.77
PACRGL-220ENST00000508952 C5orf47Q569G3 176 aa10.2□□□□□ -0.78
PACRGL-220ENST00000508952 SYNE2Q8WXH0 6885 aaKnown RBP10.19□□□□□ -0.78
PACRGL-220ENST00000508952 C1orf64Q8NEQ6 169 aa10.14□□□□□ -0.79
PACRGL-220ENST00000508952 S4R3F8 94 aa10.14□□□□□ -0.79
PACRGL-220ENST00000508952 GTF2H5Q6ZYL4 71 aa10.13□□□□□ -0.79
PACRGL-220ENST00000508952 TP53AIP1Q9HCN2 124 aa10.11□□□□□ -0.79
PACRGL-220ENST00000508952 FAM236AA0A1B0GUQ0 79 aa10.1□□□□□ -0.79
PACRGL-220ENST00000508952 FAM236BA0A1B0GV22 79 aa10.1□□□□□ -0.79
PACRGL-220ENST00000508952 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
PACRGL-220ENST00000508952 F8W1H4 67 aa10.08□□□□□ -0.8
PACRGL-220ENST00000508952 LCA10Q71F78 164 aa10.08□□□□□ -0.8
PACRGL-220ENST00000508952 LOC100996750A0A140TA64 210 aa10.05□□□□□ -0.8
PACRGL-220ENST00000508952 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
PACRGL-220ENST00000508952 KRTAP4-6Q9BYQ5 205 aa10.05□□□□□ -0.8
PACRGL-220ENST00000508952 PCP4L1A6NKN8 68 aa10.02□□□□□ -0.81
PACRGL-220ENST00000508952 CYP4F30PQ9H0H9 118 aa9.96□□□□□ -0.82
PACRGL-220ENST00000508952 MT1BP07438 61 aa9.94□□□□□ -0.82
PACRGL-220ENST00000508952 SPRR2GQ9BYE4 73 aa9.92□□□□□ -0.82
PACRGL-220ENST00000508952 KRTAP6-3Q3LI67 103 aa9.91□□□□□ -0.82
PACRGL-220ENST00000508952 TRAV22A0A0B4J277 110 aa9.9□□□□□ -0.82
PACRGL-220ENST00000508952 Q5VV11 94 aa9.9□□□□□ -0.82
PACRGL-220ENST00000508952 KRTAP19-8Q3LI54 63 aa9.88□□□□□ -0.83
PACRGL-220ENST00000508952 A0A087WVE0 104 aa9.87□□□□□ -0.83
PACRGL-220ENST00000508952 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
PACRGL-220ENST00000508952 LOC101927531A0A1B0GV80 90 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms