RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 KRTAP9-3Q9BYQ3 159 aa8.07□□□□□ -1.12
PDLIM7-213ENST00000505074 IGHV6-1A0A0B4J1U7 121 aa8.06□□□□□ -1.12
PDLIM7-213ENST00000505074 TMEM256-PLSCR3K7ERE1 68 aa8.06□□□□□ -1.12
PDLIM7-213ENST00000505074 MT1FP04733 61 aa8.06□□□□□ -1.12
PDLIM7-213ENST00000505074 KRTAP16-1A8MUX0 517 aa8.05□□□□□ -1.12
PDLIM7-213ENST00000505074 HSD52Q0P140 79 aa8.05□□□□□ -1.12
PDLIM7-213ENST00000505074 KRTAP6-3Q3LI67 103 aa8.05□□□□□ -1.12
PDLIM7-213ENST00000505074 VPS25Q9BRG1 176 aa8.05□□□□□ -1.12
PDLIM7-213ENST00000505074 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
PDLIM7-213ENST00000505074 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
PDLIM7-213ENST00000505074 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
PDLIM7-213ENST00000505074 M0R143 59 aa8.02□□□□□ -1.13
PDLIM7-213ENST00000505074 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
PDLIM7-213ENST00000505074 LINC00472Q9H8W2 130 aa8.01□□□□□ -1.13
PDLIM7-213ENST00000505074 UBE2V1Q13404 147 aa7.98□□□□□ -1.13
PDLIM7-213ENST00000505074 SCGB1C2P0DMR2 95 aa7.97□□□□□ -1.13
PDLIM7-213ENST00000505074 HRES1P13985 223 aa7.97□□□□□ -1.13
PDLIM7-213ENST00000505074 C8orf87E5RJ46 101 aa7.96□□□□□ -1.14
PDLIM7-213ENST00000505074 DSCR8Q96T75 97 aa7.96□□□□□ -1.14
PDLIM7-213ENST00000505074 A0A1B0GVX0 72 aa7.95□□□□□ -1.14
PDLIM7-213ENST00000505074 RBM3P98179 157 aaKnown RBP7.95□□□□□ -1.14
PDLIM7-213ENST00000505074 BATFQ16520 125 aa7.94□□□□□ -1.14
PDLIM7-213ENST00000505074 COL5A1-AS1Q5SY13 56 aa7.93□□□□□ -1.14
PDLIM7-213ENST00000505074 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
PDLIM7-213ENST00000505074 MTURNQ8N3F0 131 aa7.92□□□□□ -1.14
PDLIM7-213ENST00000505074 C9JAW5 83 aa7.89□□□□□ -1.15
PDLIM7-213ENST00000505074 J3KT08 172 aa7.89□□□□□ -1.15
PDLIM7-213ENST00000505074 ZCCHC13Q8WW36 166 aaKnown RBP7.89□□□□□ -1.15
PDLIM7-213ENST00000505074 NDUFB1O75438 58 aa7.87□□□□□ -1.15
PDLIM7-213ENST00000505074 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
PDLIM7-213ENST00000505074 C21orf62-AS1Q17RA5 79 aa7.87□□□□□ -1.15
PDLIM7-213ENST00000505074 LYRM7Q5U5X0 104 aa7.86□□□□□ -1.15
PDLIM7-213ENST00000505074 SPINK7P58062 85 aa7.85□□□□□ -1.15
PDLIM7-213ENST00000505074 TAX1BP3O14907 124 aa7.84□□□□□ -1.15
PDLIM7-213ENST00000505074 Q6ZQT0 140 aa7.83□□□□□ -1.16
PDLIM7-213ENST00000505074 NEBP20929 6669 aa7.83□□□□□ -1.16
PDLIM7-213ENST00000505074 A0A1B0GV90 55 aa7.79□□□□□ -1.16
PDLIM7-213ENST00000505074 C9orf118A6NHY6 69 aa7.79□□□□□ -1.16
PDLIM7-213ENST00000505074 WFDC13Q8IUB5 93 aa7.79□□□□□ -1.16
PDLIM7-213ENST00000505074 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
PDLIM7-213ENST00000505074 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
PDLIM7-213ENST00000505074 A8MWP4 228 aa7.77□□□□□ -1.17
PDLIM7-213ENST00000505074 JMJD7-PLA2G4BH0Y9G9 81 aa7.77□□□□□ -1.17
PDLIM7-213ENST00000505074 KRTAP20-1Q3LI63 56 aa7.77□□□□□ -1.17
PDLIM7-213ENST00000505074 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
PDLIM7-213ENST00000505074 NAA38Q9BRA0 125 aaKnown RBP7.77□□□□□ -1.17
PDLIM7-213ENST00000505074 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
PDLIM7-213ENST00000505074 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
PDLIM7-213ENST00000505074 A0A1W2PPM0 123 aa7.73□□□□□ -1.17
PDLIM7-213ENST00000505074 Q6ZVQ6 151 aa7.73□□□□□ -1.17
PDLIM7-213ENST00000505074 C14orf132Q9NPU4 83 aa7.72□□□□□ -1.17
PDLIM7-213ENST00000505074 A0A1B0GW54 56 aa7.71□□□□□ -1.18
PDLIM7-213ENST00000505074 PDE6GP18545 87 aa7.71□□□□□ -1.18
PDLIM7-213ENST00000505074 NREPQ16612 68 aa7.69□□□□□ -1.18
PDLIM7-213ENST00000505074 K7EP34 96 aa7.68□□□□□ -1.18
PDLIM7-213ENST00000505074 GTF2H5Q6ZYL4 71 aa7.68□□□□□ -1.18
PDLIM7-213ENST00000505074 NDUFS5O43920 106 aa7.67□□□□□ -1.18
PDLIM7-213ENST00000505074 PRR15Q8IV56 129 aa7.67□□□□□ -1.18
PDLIM7-213ENST00000505074 SPCS1Q9Y6A9 102 aa7.67□□□□□ -1.18
PDLIM7-213ENST00000505074 MRPL34Q9BQ48 92 aaKnown RBP7.65□□□□□ -1.18
PDLIM7-213ENST00000505074 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
PDLIM7-213ENST00000505074 TMEM254Q8TBM7 123 aa7.64□□□□□ -1.19
PDLIM7-213ENST00000505074 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
PDLIM7-213ENST00000505074 hDV103S1A0JD37 113 aa7.61□□□□□ -1.19
PDLIM7-213ENST00000505074 K7EQZ3 153 aa7.59□□□□□ -1.19
PDLIM7-213ENST00000505074 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
PDLIM7-213ENST00000505074 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
PDLIM7-213ENST00000505074 IGKV2-30P06310 120 aa7.58□□□□□ -1.2
PDLIM7-213ENST00000505074 F8W1H4 67 aa7.54□□□□□ -1.2
PDLIM7-213ENST00000505074 BPY2O14599 106 aa7.54□□□□□ -1.2
PDLIM7-213ENST00000505074 PRO0461Q9UI25 63 aa7.54□□□□□ -1.2
PDLIM7-213ENST00000505074 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
PDLIM7-213ENST00000505074 H3BT86 120 aa7.51□□□□□ -1.21
PDLIM7-213ENST00000505074 SMCPP49901 116 aaPredicted RBP7.48□□□□□ -1.21
PDLIM7-213ENST00000505074 Q5W150 140 aa7.48□□□□□ -1.21
PDLIM7-213ENST00000505074 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
PDLIM7-213ENST00000505074 Q8N9L7 120 aa7.47□□□□□ -1.21
PDLIM7-213ENST00000505074 HCG22E2RYF7 251 aa7.46□□□□□ -1.22
PDLIM7-213ENST00000505074 A6NN06 94 aa7.44□□□□□ -1.22
PDLIM7-213ENST00000505074 C4orf26Q17RF5 130 aa7.44□□□□□ -1.22
PDLIM7-213ENST00000505074 ETDBQ3ZM63 59 aa7.42□□□□□ -1.22
PDLIM7-213ENST00000505074 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.22
PDLIM7-213ENST00000505074 KRTAP5-9P26371 169 aa7.4□□□□□ -1.22
PDLIM7-213ENST00000505074 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.22
PDLIM7-213ENST00000505074 FAM236AA0A1B0GUQ0 79 aa7.39□□□□□ -1.23
PDLIM7-213ENST00000505074 FAM236BA0A1B0GV22 79 aa7.39□□□□□ -1.23
PDLIM7-213ENST00000505074 CXCL6P80162 114 aa7.38□□□□□ -1.23
PDLIM7-213ENST00000505074 C5orf47Q569G3 176 aa7.38□□□□□ -1.23
PDLIM7-213ENST00000505074 K7ERU9 68 aa7.36□□□□□ -1.23
PDLIM7-213ENST00000505074 J3QR89 54 aa7.35□□□□□ -1.23
PDLIM7-213ENST00000505074 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
PDLIM7-213ENST00000505074 S4R3F8 94 aa7.32□□□□□ -1.24
PDLIM7-213ENST00000505074 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
PDLIM7-213ENST00000505074 KMT2DO14686 5537 aa7.3□□□□□ -1.24
PDLIM7-213ENST00000505074 C1orf64Q8NEQ6 169 aa7.27□□□□□ -1.25
PDLIM7-213ENST00000505074 FAM240AA0A1B0GVK7 77 aa7.26□□□□□ -1.25
PDLIM7-213ENST00000505074 CSAG1Q6PB30 78 aa7.26□□□□□ -1.25
PDLIM7-213ENST00000505074 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
PDLIM7-213ENST00000505074 Q5VV11 94 aa7.23□□□□□ -1.25
PDLIM7-213ENST00000505074 LCA10Q71F78 164 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms