RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
HOXC9-202ENST00000504557 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
HOXC9-202ENST00000504557 LYRM7Q5U5X0 104 aa7.34□□□□□ -1.23
HOXC9-202ENST00000504557 C14orf132Q9NPU4 83 aa7.34□□□□□ -1.23
HOXC9-202ENST00000504557 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
HOXC9-202ENST00000504557 JMJD7-PLA2G4BH0Y9G9 81 aa7.33□□□□□ -1.24
HOXC9-202ENST00000504557 Q6ZQT0 140 aa7.33□□□□□ -1.24
HOXC9-202ENST00000504557 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
HOXC9-202ENST00000504557 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
HOXC9-202ENST00000504557 MTURNQ8N3F0 131 aa7.3□□□□□ -1.24
HOXC9-202ENST00000504557 LOC110117498A0A087WWA1 95 aa7.29□□□□□ -1.24
HOXC9-202ENST00000504557 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
HOXC9-202ENST00000504557 J3KT08 172 aa7.29□□□□□ -1.24
HOXC9-202ENST00000504557 C21orf62-AS1Q17RA5 79 aa7.29□□□□□ -1.24
HOXC9-202ENST00000504557 FAM236DA0A1B0GTK5 79 aa7.27□□□□□ -1.25
HOXC9-202ENST00000504557 C9orf118A6NHY6 69 aa7.27□□□□□ -1.25
HOXC9-202ENST00000504557 NDUFB1O75438 58 aa7.27□□□□□ -1.25
HOXC9-202ENST00000504557 FAM236CP0DP71 79 aa7.27□□□□□ -1.25
HOXC9-202ENST00000504557 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
HOXC9-202ENST00000504557 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
HOXC9-202ENST00000504557 TAX1BP3O14907 124 aa7.25□□□□□ -1.25
HOXC9-202ENST00000504557 PDE6GP18545 87 aa7.25□□□□□ -1.25
HOXC9-202ENST00000504557 A0A1W2PPM0 123 aa7.24□□□□□ -1.25
HOXC9-202ENST00000504557 A8MWP4 228 aa7.22□□□□□ -1.25
HOXC9-202ENST00000504557 NREPQ16612 68 aa7.22□□□□□ -1.25
HOXC9-202ENST00000504557 IGKV3D-7A0A0C4DH55 119 aa7.21□□□□□ -1.26
HOXC9-202ENST00000504557 C8orf17Q9NRJ1 99 aa7.21□□□□□ -1.26
HOXC9-202ENST00000504557 H3BT86 120 aa7.2□□□□□ -1.26
HOXC9-202ENST00000504557 ZCCHC13Q8WW36 166 aaKnown RBP7.2□□□□□ -1.26
HOXC9-202ENST00000504557 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
HOXC9-202ENST00000504557 A0A1B0GW54 56 aa7.19□□□□□ -1.26
HOXC9-202ENST00000504557 HRES1P13985 223 aa7.19□□□□□ -1.26
HOXC9-202ENST00000504557 FSIP2Q5CZC0 6907 aa7.18□□□□□ -1.26
HOXC9-202ENST00000504557 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
HOXC9-202ENST00000504557 Q6ZVQ6 151 aa7.15□□□□□ -1.26
HOXC9-202ENST00000504557 PRR15Q8IV56 129 aa7.15□□□□□ -1.26
HOXC9-202ENST00000504557 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.26
HOXC9-202ENST00000504557 SPINK7P58062 85 aa7.14□□□□□ -1.27
HOXC9-202ENST00000504557 Q8N9P0 234 aaPredicted RBP7.14□□□□□ -1.27
HOXC9-202ENST00000504557 K7EQZ3 153 aa7.12□□□□□ -1.27
HOXC9-202ENST00000504557 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
HOXC9-202ENST00000504557 MMP24-AS1A0A0U1RRL7 71 aa7.11□□□□□ -1.27
HOXC9-202ENST00000504557 NDUFS5O43920 106 aa7.11□□□□□ -1.27
HOXC9-202ENST00000504557 BPY2O14599 106 aa7.1□□□□□ -1.27
HOXC9-202ENST00000504557 COL5A1-AS1Q5SY13 56 aa7.09□□□□□ -1.27
HOXC9-202ENST00000504557 MRPL34Q9BQ48 92 aaKnown RBP7.09□□□□□ -1.27
HOXC9-202ENST00000504557 TMEM254Q8TBM7 123 aa7.08□□□□□ -1.28
HOXC9-202ENST00000504557 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
HOXC9-202ENST00000504557 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
HOXC9-202ENST00000504557 Q8N9L7 120 aa7.06□□□□□ -1.28
HOXC9-202ENST00000504557 KRTAP9-8Q9BYQ0 159 aa7.06□□□□□ -1.28
HOXC9-202ENST00000504557 PCP4L1A6NKN8 68 aa7.04□□□□□ -1.28
HOXC9-202ENST00000504557 K7EP34 96 aa7.03□□□□□ -1.28
HOXC9-202ENST00000504557 PRO0461Q9UI25 63 aa7.01□□□□□ -1.29
HOXC9-202ENST00000504557 MT2AP02795 61 aa7□□□□□ -1.29
HOXC9-202ENST00000504557 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
HOXC9-202ENST00000504557 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
HOXC9-202ENST00000504557 IGKV2-30P06310 120 aa6.98□□□□□ -1.29
HOXC9-202ENST00000504557 LINC00846Q9NV44 126 aa6.98□□□□□ -1.29
HOXC9-202ENST00000504557 HCG22E2RYF7 251 aa6.97□□□□□ -1.29
HOXC9-202ENST00000504557 UBL5Q9BZL1 73 aa6.97□□□□□ -1.29
HOXC9-202ENST00000504557 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
HOXC9-202ENST00000504557 MT1FP04733 61 aa6.95□□□□□ -1.3
HOXC9-202ENST00000504557 Q5W150 140 aa6.95□□□□□ -1.3
HOXC9-202ENST00000504557 GTF2H5Q6ZYL4 71 aa6.95□□□□□ -1.3
HOXC9-202ENST00000504557 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
HOXC9-202ENST00000504557 ETDBQ3ZM63 59 aa6.89□□□□□ -1.31
HOXC9-202ENST00000504557 F8W1H4 67 aa6.87□□□□□ -1.31
HOXC9-202ENST00000504557 USH2AO75445 5202 aa6.86□□□□□ -1.31
HOXC9-202ENST00000504557 CXCL6P80162 114 aa6.86□□□□□ -1.31
HOXC9-202ENST00000504557 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
HOXC9-202ENST00000504557 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
HOXC9-202ENST00000504557 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
HOXC9-202ENST00000504557 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
HOXC9-202ENST00000504557 TP53AIP1Q9HCN2 124 aa6.73□□□□□ -1.33
HOXC9-202ENST00000504557 C5orf47Q569G3 176 aa6.71□□□□□ -1.34
HOXC9-202ENST00000504557 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
HOXC9-202ENST00000504557 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
HOXC9-202ENST00000504557 HIST1H4AP62805 103 aaKnown RBP6.68□□□□□ -1.34
HOXC9-202ENST00000504557 ACYP1P07311 99 aa6.67□□□□□ -1.34
HOXC9-202ENST00000504557 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
HOXC9-202ENST00000504557 S4R3F8 94 aa6.67□□□□□ -1.34
HOXC9-202ENST00000504557 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
HOXC9-202ENST00000504557 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
HOXC9-202ENST00000504557 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
HOXC9-202ENST00000504557 FAM236AA0A1B0GUQ0 79 aa6.63□□□□□ -1.35
HOXC9-202ENST00000504557 FAM236BA0A1B0GV22 79 aa6.63□□□□□ -1.35
HOXC9-202ENST00000504557 TRAV22A0A0B4J277 110 aa6.62□□□□□ -1.35
HOXC9-202ENST00000504557 FAM240AA0A1B0GVK7 77 aa6.62□□□□□ -1.35
HOXC9-202ENST00000504557 ATP5EP2Q5VTU8 51 aa6.62□□□□□ -1.35
HOXC9-202ENST00000504557 LCA10Q71F78 164 aa6.61□□□□□ -1.35
HOXC9-202ENST00000504557 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
HOXC9-202ENST00000504557 A0A1B0GV90 55 aa6.6□□□□□ -1.35
HOXC9-202ENST00000504557 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
HOXC9-202ENST00000504557 A0A087WVE0 104 aa6.58□□□□□ -1.36
HOXC9-202ENST00000504557 LOC101927531A0A1B0GV80 90 aa6.57□□□□□ -1.36
HOXC9-202ENST00000504557 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
HOXC9-202ENST00000504557 H0Y9P7 68 aa6.56□□□□□ -1.36
HOXC9-202ENST00000504557 UQCRQO14949 82 aa6.54□□□□□ -1.36
HOXC9-202ENST00000504557 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms