RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 KRTAP13-2Q52LG2 175 aa9.89□□□□□ -0.83
AP004609.1-201ENST00000498872 LINC00472Q9H8W2 130 aa9.89□□□□□ -0.83
AP004609.1-201ENST00000498872 DEFB116Q30KQ4 102 aa9.88□□□□□ -0.83
AP004609.1-201ENST00000498872 MUC2Q02817 5179 aa9.85□□□□□ -0.83
AP004609.1-201ENST00000498872 SS18L2Q9UHA2 77 aa9.85□□□□□ -0.83
AP004609.1-201ENST00000498872 HRCT1Q6UXD1 115 aa9.83□□□□□ -0.84
AP004609.1-201ENST00000498872 RETNLBQ9BQ08 111 aa9.83□□□□□ -0.84
AP004609.1-201ENST00000498872 J3KT08 172 aa9.82□□□□□ -0.84
AP004609.1-201ENST00000498872 A8MWP4 228 aa9.82□□□□□ -0.84
AP004609.1-201ENST00000498872 HCG22E2RYF7 251 aa9.82□□□□□ -0.84
AP004609.1-201ENST00000498872 FAM229BQ4G0N7 80 aa9.81□□□□□ -0.84
AP004609.1-201ENST00000498872 SSBP3-AS1Q7Z2R9 100 aa9.81□□□□□ -0.84
AP004609.1-201ENST00000498872 LINC00304Q8N9R0 145 aa9.8□□□□□ -0.84
AP004609.1-201ENST00000498872 Q96NJ1 140 aa9.8□□□□□ -0.84
AP004609.1-201ENST00000498872 OCR1Q9BZK8 76 aa9.8□□□□□ -0.84
AP004609.1-201ENST00000498872 PRR15Q8IV56 129 aa9.79□□□□□ -0.84
AP004609.1-201ENST00000498872 CD164Q04900 197 aa9.78□□□□□ -0.84
AP004609.1-201ENST00000498872 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
AP004609.1-201ENST00000498872 CYSTM1Q9H1C7 97 aa9.77□□□□□ -0.85
AP004609.1-201ENST00000498872 NDUFB1O75438 58 aa9.73□□□□□ -0.85
AP004609.1-201ENST00000498872 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
AP004609.1-201ENST00000498872 KLKP1Q107X0 134 aa9.71□□□□□ -0.85
AP004609.1-201ENST00000498872 CASC2Q6XLA1 102 aa9.7□□□□□ -0.86
AP004609.1-201ENST00000498872 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
AP004609.1-201ENST00000498872 MMP24-AS1A0A0U1RRL7 71 aa9.67□□□□□ -0.86
AP004609.1-201ENST00000498872 TMEM258P61165 79 aa9.67□□□□□ -0.86
AP004609.1-201ENST00000498872 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
AP004609.1-201ENST00000498872 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
AP004609.1-201ENST00000498872 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
AP004609.1-201ENST00000498872 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
AP004609.1-201ENST00000498872 A0A0U1RQV1 116 aa9.64□□□□□ -0.87
AP004609.1-201ENST00000498872 TPRXLQ17RH7 258 aa9.64□□□□□ -0.87
AP004609.1-201ENST00000498872 Q5XG85 94 aa9.63□□□□□ -0.87
AP004609.1-201ENST00000498872 H7BZZ5 65 aa9.62□□□□□ -0.87
AP004609.1-201ENST00000498872 C8orf17Q9NRJ1 99 aa9.62□□□□□ -0.87
AP004609.1-201ENST00000498872 hDV103S1A0JD37 113 aa9.61□□□□□ -0.87
AP004609.1-201ENST00000498872 NDUFC1O43677 76 aa9.61□□□□□ -0.87
AP004609.1-201ENST00000498872 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
AP004609.1-201ENST00000498872 C5orf47Q569G3 176 aa9.6□□□□□ -0.87
AP004609.1-201ENST00000498872 C4orf48Q5BLP8 95 aa9.6□□□□□ -0.87
AP004609.1-201ENST00000498872 SPAG11AQ6PDA7 123 aa9.6□□□□□ -0.87
AP004609.1-201ENST00000498872 LIMD2Q9BT23 127 aa9.56□□□□□ -0.88
AP004609.1-201ENST00000498872 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
AP004609.1-201ENST00000498872 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
AP004609.1-201ENST00000498872 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
AP004609.1-201ENST00000498872 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
AP004609.1-201ENST00000498872 MP68P56378 58 aa9.53□□□□□ -0.88
AP004609.1-201ENST00000498872 C1orf195Q5TG92 126 aa9.53□□□□□ -0.88
AP004609.1-201ENST00000498872 MUC17Q685J3 4493 aa9.52□□□□□ -0.89
AP004609.1-201ENST00000498872 SPINK1P00995 79 aa9.51□□□□□ -0.89
AP004609.1-201ENST00000498872 FP248Q71RG6 208 aaPredicted RBP9.51□□□□□ -0.89
AP004609.1-201ENST00000498872 NOTCH2NLQ7Z3S9 236 aa9.51□□□□□ -0.89
AP004609.1-201ENST00000498872 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
AP004609.1-201ENST00000498872 C8orf87E5RJ46 101 aa9.5□□□□□ -0.89
AP004609.1-201ENST00000498872 TP53AIP1Q9HCN2 124 aa9.5□□□□□ -0.89
AP004609.1-201ENST00000498872 H0Y9P7 68 aa9.49□□□□□ -0.89
AP004609.1-201ENST00000498872 LCE2AQ5TA79 106 aaPredicted RBP9.49□□□□□ -0.89
AP004609.1-201ENST00000498872 H3BPC8 53 aa9.49□□□□□ -0.89
AP004609.1-201ENST00000498872 KRTAP13-3Q3SY46 172 aa9.49□□□□□ -0.89
AP004609.1-201ENST00000498872 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
AP004609.1-201ENST00000498872 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
AP004609.1-201ENST00000498872 TRAV22A0A0B4J277 110 aa9.45□□□□□ -0.9
AP004609.1-201ENST00000498872 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
AP004609.1-201ENST00000498872 NDUFS5O43920 106 aa9.44□□□□□ -0.9
AP004609.1-201ENST00000498872 LINC00208Q96KT6 92 aa9.44□□□□□ -0.9
AP004609.1-201ENST00000498872 LINC00313P59037 77 aa9.42□□□□□ -0.9
AP004609.1-201ENST00000498872 KRTAP9-2Q9BYQ4 174 aa9.41□□□□□ -0.9
AP004609.1-201ENST00000498872 C1orf64Q8NEQ6 169 aa9.39□□□□□ -0.91
AP004609.1-201ENST00000498872 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
AP004609.1-201ENST00000498872 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
AP004609.1-201ENST00000498872 SERP1Q9Y6X1 66 aa9.37□□□□□ -0.91
AP004609.1-201ENST00000498872 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
AP004609.1-201ENST00000498872 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
AP004609.1-201ENST00000498872 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
AP004609.1-201ENST00000498872 XP32Q5T750 250 aa9.3□□□□□ -0.92
AP004609.1-201ENST00000498872 Q5W150 140 aa9.28□□□□□ -0.92
AP004609.1-201ENST00000498872 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
AP004609.1-201ENST00000498872 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.92
AP004609.1-201ENST00000498872 LOC101927531A0A1B0GV80 90 aa9.25□□□□□ -0.93
AP004609.1-201ENST00000498872 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
AP004609.1-201ENST00000498872 PCOTHQ58A44 107 aa9.21□□□□□ -0.93
AP004609.1-201ENST00000498872 SMIM26A0A096LP01 95 aa9.15□□□□□ -0.94
AP004609.1-201ENST00000498872 IGKV2-30P06310 120 aa9.13□□□□□ -0.95
AP004609.1-201ENST00000498872 LCE2CQ5TA81 110 aa9.12□□□□□ -0.95
AP004609.1-201ENST00000498872 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
AP004609.1-201ENST00000498872 KRTAP19-2Q3LHN2 52 aa9.08□□□□□ -0.96
AP004609.1-201ENST00000498872 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
AP004609.1-201ENST00000498872 A8MUU9 505 aa9.07□□□□□ -0.96
AP004609.1-201ENST00000498872 HRES1P13985 223 aa9.03□□□□□ -0.96
AP004609.1-201ENST00000498872 MT1HP80294 61 aa9.02□□□□□ -0.96
AP004609.1-201ENST00000498872 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.97
AP004609.1-201ENST00000498872 COA5Q86WW8 74 aa9.02□□□□□ -0.97
AP004609.1-201ENST00000498872 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
AP004609.1-201ENST00000498872 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
AP004609.1-201ENST00000498872 RPL37P61927 97 aaKnown RBP8.99□□□□□ -0.97
AP004609.1-201ENST00000498872 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
AP004609.1-201ENST00000498872 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
AP004609.1-201ENST00000498872 Q75L30 129 aa8.96□□□□□ -0.98
AP004609.1-201ENST00000498872 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
AP004609.1-201ENST00000498872 DMAC1Q96GE9 116 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms