RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
CTDSP1-212ENST00000494067 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
CTDSP1-212ENST00000494067 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
CTDSP1-212ENST00000494067 A0A1B0GVX0 72 aa6.73□□□□□ -1.33
CTDSP1-212ENST00000494067 J3KT08 172 aa6.73□□□□□ -1.33
CTDSP1-212ENST00000494067 C9JAW5 83 aa6.72□□□□□ -1.33
CTDSP1-212ENST00000494067 TSTD3H0UI37 97 aa6.72□□□□□ -1.33
CTDSP1-212ENST00000494067 NDUFB1O75438 58 aa6.71□□□□□ -1.34
CTDSP1-212ENST00000494067 HRES1P13985 223 aa6.71□□□□□ -1.34
CTDSP1-212ENST00000494067 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.34
CTDSP1-212ENST00000494067 BAALC-AS2P0C853 105 aa6.7□□□□□ -1.34
CTDSP1-212ENST00000494067 USH2AO75445 5202 aa6.68□□□□□ -1.34
CTDSP1-212ENST00000494067 MT2AP02795 61 aa6.67□□□□□ -1.34
CTDSP1-212ENST00000494067 LYRM7Q5U5X0 104 aa6.67□□□□□ -1.34
CTDSP1-212ENST00000494067 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
CTDSP1-212ENST00000494067 JMJD7-PLA2G4BH0Y9G9 81 aa6.66□□□□□ -1.34
CTDSP1-212ENST00000494067 ATXN8Q156A1 80 aa6.65□□□□□ -1.34
CTDSP1-212ENST00000494067 Q6ZQT0 140 aa6.65□□□□□ -1.34
CTDSP1-212ENST00000494067 SSPOA2VEC9 5147 aa6.65□□□□□ -1.35
CTDSP1-212ENST00000494067 A0A1B0GW54 56 aa6.64□□□□□ -1.35
CTDSP1-212ENST00000494067 MT1FP04733 61 aa6.64□□□□□ -1.35
CTDSP1-212ENST00000494067 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
CTDSP1-212ENST00000494067 SPINK7P58062 85 aa6.63□□□□□ -1.35
CTDSP1-212ENST00000494067 M0R143 59 aa6.62□□□□□ -1.35
CTDSP1-212ENST00000494067 PDE6GP18545 87 aa6.62□□□□□ -1.35
CTDSP1-212ENST00000494067 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
CTDSP1-212ENST00000494067 KRTAP10-10P60014 251 aa6.61□□□□□ -1.35
CTDSP1-212ENST00000494067 A8MWP4 228 aa6.6□□□□□ -1.35
CTDSP1-212ENST00000494067 Q8N9P0 234 aaPredicted RBP6.6□□□□□ -1.35
CTDSP1-212ENST00000494067 LOC110117498A0A087WWA1 95 aa6.59□□□□□ -1.35
CTDSP1-212ENST00000494067 LCE2BO14633 110 aa6.59□□□□□ -1.35
CTDSP1-212ENST00000494067 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
CTDSP1-212ENST00000494067 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.58□□□□□ -1.36
CTDSP1-212ENST00000494067 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
CTDSP1-212ENST00000494067 NREPQ16612 68 aa6.56□□□□□ -1.36
CTDSP1-212ENST00000494067 Q6ZVQ6 151 aa6.56□□□□□ -1.36
CTDSP1-212ENST00000494067 IGKV3D-7A0A0C4DH55 119 aa6.54□□□□□ -1.36
CTDSP1-212ENST00000494067 WFDC13Q8IUB5 93 aa6.54□□□□□ -1.36
CTDSP1-212ENST00000494067 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
CTDSP1-212ENST00000494067 BATFQ16520 125 aa6.52□□□□□ -1.37
CTDSP1-212ENST00000494067 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
CTDSP1-212ENST00000494067 LINC00846Q9NV44 126 aa6.51□□□□□ -1.37
CTDSP1-212ENST00000494067 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
CTDSP1-212ENST00000494067 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
CTDSP1-212ENST00000494067 NDUFS5O43920 106 aa6.48□□□□□ -1.37
CTDSP1-212ENST00000494067 TMEM254Q8TBM7 123 aa6.48□□□□□ -1.37
CTDSP1-212ENST00000494067 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
CTDSP1-212ENST00000494067 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
CTDSP1-212ENST00000494067 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
CTDSP1-212ENST00000494067 COL5A1-AS1Q5SY13 56 aa6.44□□□□□ -1.38
CTDSP1-212ENST00000494067 H3BT86 120 aa6.42□□□□□ -1.38
CTDSP1-212ENST00000494067 K7EQZ3 153 aa6.42□□□□□ -1.38
CTDSP1-212ENST00000494067 BPY2O14599 106 aa6.42□□□□□ -1.38
CTDSP1-212ENST00000494067 H1FX-AS1Q4G0G2 97 aa6.42□□□□□ -1.38
CTDSP1-212ENST00000494067 A0A1B0GV90 55 aa6.4□□□□□ -1.38
CTDSP1-212ENST00000494067 IGKV2D-30A0A075B6S6 120 aa6.38□□□□□ -1.39
CTDSP1-212ENST00000494067 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
CTDSP1-212ENST00000494067 IGKV2-30P06310 120 aa6.38□□□□□ -1.39
CTDSP1-212ENST00000494067 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
CTDSP1-212ENST00000494067 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
CTDSP1-212ENST00000494067 A0A1W2PPM0 123 aa6.35□□□□□ -1.39
CTDSP1-212ENST00000494067 Q5W150 140 aa6.34□□□□□ -1.39
CTDSP1-212ENST00000494067 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
CTDSP1-212ENST00000494067 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
CTDSP1-212ENST00000494067 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
CTDSP1-212ENST00000494067 Q8N9L7 120 aa6.31□□□□□ -1.4
CTDSP1-212ENST00000494067 CXCL6P80162 114 aa6.3□□□□□ -1.4
CTDSP1-212ENST00000494067 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
CTDSP1-212ENST00000494067 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
CTDSP1-212ENST00000494067 UBL5Q9BZL1 73 aa6.27□□□□□ -1.41
CTDSP1-212ENST00000494067 SPCS1Q9Y6A9 102 aa6.27□□□□□ -1.41
CTDSP1-212ENST00000494067 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
CTDSP1-212ENST00000494067 GTF2H5Q6ZYL4 71 aa6.24□□□□□ -1.41
CTDSP1-212ENST00000494067 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
CTDSP1-212ENST00000494067 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
CTDSP1-212ENST00000494067 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
CTDSP1-212ENST00000494067 C5orf47Q569G3 176 aa6.2□□□□□ -1.42
CTDSP1-212ENST00000494067 PRO0461Q9UI25 63 aa6.2□□□□□ -1.42
CTDSP1-212ENST00000494067 K7EP34 96 aa6.19□□□□□ -1.42
CTDSP1-212ENST00000494067 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
CTDSP1-212ENST00000494067 S4R3F8 94 aa6.17□□□□□ -1.42
CTDSP1-212ENST00000494067 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
CTDSP1-212ENST00000494067 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
CTDSP1-212ENST00000494067 TP53AIP1Q9HCN2 124 aa6.16□□□□□ -1.42
CTDSP1-212ENST00000494067 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
CTDSP1-212ENST00000494067 F8W1H4 67 aa6.09□□□□□ -1.43
CTDSP1-212ENST00000494067 LCA10Q71F78 164 aa6.09□□□□□ -1.43
CTDSP1-212ENST00000494067 MT1BP07438 61 aa6.07□□□□□ -1.44
CTDSP1-212ENST00000494067 Q5VV11 94 aa6.07□□□□□ -1.44
CTDSP1-212ENST00000494067 A6NN06 94 aa6.06□□□□□ -1.44
CTDSP1-212ENST00000494067 K7ERU9 68 aa6.02□□□□□ -1.45
CTDSP1-212ENST00000494067 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
CTDSP1-212ENST00000494067 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
CTDSP1-212ENST00000494067 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
CTDSP1-212ENST00000494067 J3QR89 54 aa6.01□□□□□ -1.45
CTDSP1-212ENST00000494067 ETDBQ3ZM63 59 aa6.01□□□□□ -1.45
CTDSP1-212ENST00000494067 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
CTDSP1-212ENST00000494067 CYP4F30PQ9H0H9 118 aa6□□□□□ -1.45
CTDSP1-212ENST00000494067 A0A087WVE0 104 aa5.99□□□□□ -1.45
CTDSP1-212ENST00000494067 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms