RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 IGHV6-1A0A0B4J1U7 121 aa6.8□□□□□ -1.32
CLIP2-209ENST00000493166 ATP11AUNQ6ZP68 121 aa6.8□□□□□ -1.32
CLIP2-209ENST00000493166 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
CLIP2-209ENST00000493166 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
CLIP2-209ENST00000493166 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
CLIP2-209ENST00000493166 A8MUU9 505 aa6.78□□□□□ -1.32
CLIP2-209ENST00000493166 GTF2H5Q6ZYL4 71 aa6.78□□□□□ -1.32
CLIP2-209ENST00000493166 NREPQ16612 68 aa6.77□□□□□ -1.33
CLIP2-209ENST00000493166 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
CLIP2-209ENST00000493166 PRO0461Q9UI25 63 aa6.77□□□□□ -1.33
CLIP2-209ENST00000493166 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
CLIP2-209ENST00000493166 NDUFB1O75438 58 aa6.76□□□□□ -1.33
CLIP2-209ENST00000493166 KRTAP16-1A8MUX0 517 aa6.75□□□□□ -1.33
CLIP2-209ENST00000493166 A8MWP4 228 aa6.73□□□□□ -1.33
CLIP2-209ENST00000493166 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
CLIP2-209ENST00000493166 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
CLIP2-209ENST00000493166 F8W1H4 67 aa6.69□□□□□ -1.34
CLIP2-209ENST00000493166 C8orf17Q9NRJ1 99 aa6.68□□□□□ -1.34
CLIP2-209ENST00000493166 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
CLIP2-209ENST00000493166 BPY2O14599 106 aa6.66□□□□□ -1.34
CLIP2-209ENST00000493166 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
CLIP2-209ENST00000493166 Q6ZVQ6 151 aa6.66□□□□□ -1.34
CLIP2-209ENST00000493166 ETDBQ3ZM63 59 aa6.65□□□□□ -1.34
CLIP2-209ENST00000493166 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
CLIP2-209ENST00000493166 K7EQZ3 153 aa6.64□□□□□ -1.35
CLIP2-209ENST00000493166 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
CLIP2-209ENST00000493166 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
CLIP2-209ENST00000493166 Q8N9P0 234 aaPredicted RBP6.62□□□□□ -1.35
CLIP2-209ENST00000493166 UBL5Q9BZL1 73 aa6.62□□□□□ -1.35
CLIP2-209ENST00000493166 LINC00846Q9NV44 126 aa6.62□□□□□ -1.35
CLIP2-209ENST00000493166 MMP24-AS1A0A0U1RRL7 71 aa6.61□□□□□ -1.35
CLIP2-209ENST00000493166 ZCCHC13Q8WW36 166 aaKnown RBP6.6□□□□□ -1.35
CLIP2-209ENST00000493166 TMEM254Q8TBM7 123 aa6.59□□□□□ -1.35
CLIP2-209ENST00000493166 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
CLIP2-209ENST00000493166 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
CLIP2-209ENST00000493166 MT1HP80294 61 aa6.57□□□□□ -1.36
CLIP2-209ENST00000493166 Q8N9L7 120 aa6.57□□□□□ -1.36
CLIP2-209ENST00000493166 NDUFS5O43920 106 aa6.54□□□□□ -1.36
CLIP2-209ENST00000493166 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
CLIP2-209ENST00000493166 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
CLIP2-209ENST00000493166 A0A1B0GV90 55 aa6.52□□□□□ -1.37
CLIP2-209ENST00000493166 CASC2Q6XLA1 102 aa6.52□□□□□ -1.37
CLIP2-209ENST00000493166 M0R2T5 61 aa6.5□□□□□ -1.37
CLIP2-209ENST00000493166 HRES1P13985 223 aa6.5□□□□□ -1.37
CLIP2-209ENST00000493166 SPINK7P58062 85 aa6.5□□□□□ -1.37
CLIP2-209ENST00000493166 RBM12B-AS1Q9P1G2 102 aa6.5□□□□□ -1.37
CLIP2-209ENST00000493166 FAM236DA0A1B0GTK5 79 aa6.49□□□□□ -1.37
CLIP2-209ENST00000493166 ACYP1P07311 99 aa6.49□□□□□ -1.37
CLIP2-209ENST00000493166 FAM236CP0DP71 79 aa6.49□□□□□ -1.37
CLIP2-209ENST00000493166 CXCL6P80162 114 aa6.49□□□□□ -1.37
CLIP2-209ENST00000493166 HCG22E2RYF7 251 aa6.48□□□□□ -1.37
CLIP2-209ENST00000493166 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.38
CLIP2-209ENST00000493166 FAM240AA0A1B0GVK7 77 aa6.46□□□□□ -1.38
CLIP2-209ENST00000493166 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
CLIP2-209ENST00000493166 KRTAP10-6P60371 365 aaPredicted RBP6.41□□□□□ -1.38
CLIP2-209ENST00000493166 Q5W150 140 aa6.41□□□□□ -1.38
CLIP2-209ENST00000493166 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
CLIP2-209ENST00000493166 IGKV2D-30A0A075B6S6 120 aa6.39□□□□□ -1.39
CLIP2-209ENST00000493166 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
CLIP2-209ENST00000493166 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
CLIP2-209ENST00000493166 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
CLIP2-209ENST00000493166 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
CLIP2-209ENST00000493166 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
CLIP2-209ENST00000493166 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
CLIP2-209ENST00000493166 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
CLIP2-209ENST00000493166 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
CLIP2-209ENST00000493166 J3QR89 54 aa6.33□□□□□ -1.4
CLIP2-209ENST00000493166 A0A087WVE0 104 aa6.26□□□□□ -1.41
CLIP2-209ENST00000493166 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
CLIP2-209ENST00000493166 C4orf26Q17RF5 130 aa6.25□□□□□ -1.41
CLIP2-209ENST00000493166 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
CLIP2-209ENST00000493166 TRAV22A0A0B4J277 110 aa6.24□□□□□ -1.41
CLIP2-209ENST00000493166 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
CLIP2-209ENST00000493166 UQCRQO14949 82 aa6.21□□□□□ -1.42
CLIP2-209ENST00000493166 LOC101927531A0A1B0GV80 90 aa6.18□□□□□ -1.42
CLIP2-209ENST00000493166 H0Y9P7 68 aa6.18□□□□□ -1.42
CLIP2-209ENST00000493166 MT2AP02795 61 aa6.17□□□□□ -1.42
CLIP2-209ENST00000493166 CYP4F30PQ9H0H9 118 aa6.17□□□□□ -1.42
CLIP2-209ENST00000493166 K7ERU9 68 aa6.16□□□□□ -1.42
CLIP2-209ENST00000493166 ATOX1O00244 68 aa6.16□□□□□ -1.42
CLIP2-209ENST00000493166 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
CLIP2-209ENST00000493166 MT1FP04733 61 aa6.13□□□□□ -1.43
CLIP2-209ENST00000493166 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
CLIP2-209ENST00000493166 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
CLIP2-209ENST00000493166 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
CLIP2-209ENST00000493166 S4R3F8 94 aa6.1□□□□□ -1.43
CLIP2-209ENST00000493166 SCGB1A1P11684 91 aa6.09□□□□□ -1.43
CLIP2-209ENST00000493166 MP68P56378 58 aa6.09□□□□□ -1.43
CLIP2-209ENST00000493166 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
CLIP2-209ENST00000493166 IMUPQ9GZP8 106 aa6.08□□□□□ -1.44
CLIP2-209ENST00000493166 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
CLIP2-209ENST00000493166 C5orf47Q569G3 176 aa6.06□□□□□ -1.44
CLIP2-209ENST00000493166 LCA10Q71F78 164 aa6.04□□□□□ -1.44
CLIP2-209ENST00000493166 USH2AO75445 5202 aa6.02□□□□□ -1.45
CLIP2-209ENST00000493166 KLKP1Q107X0 134 aa6.02□□□□□ -1.45
CLIP2-209ENST00000493166 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
CLIP2-209ENST00000493166 H3BPC8 53 aa6.01□□□□□ -1.45
CLIP2-209ENST00000493166 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
CLIP2-209ENST00000493166 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
CLIP2-209ENST00000493166 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms