RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 LINC00313P59037 77 aa7.49□□□□□ -1.21
CCM2-217ENST00000492883 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
CCM2-217ENST00000492883 NREPQ16612 68 aa7.48□□□□□ -1.21
CCM2-217ENST00000492883 Q75L30 129 aa7.48□□□□□ -1.21
CCM2-217ENST00000492883 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
CCM2-217ENST00000492883 PRO0461Q9UI25 63 aa7.48□□□□□ -1.21
CCM2-217ENST00000492883 ATP11AUNQ6ZP68 121 aa7.46□□□□□ -1.22
CCM2-217ENST00000492883 NDUFB1O75438 58 aa7.45□□□□□ -1.22
CCM2-217ENST00000492883 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
CCM2-217ENST00000492883 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
CCM2-217ENST00000492883 MUC2Q02817 5179 aa7.44□□□□□ -1.22
CCM2-217ENST00000492883 F8W1H4 67 aa7.43□□□□□ -1.22
CCM2-217ENST00000492883 NOTCH2NLQ7Z3S9 236 aa7.43□□□□□ -1.22
CCM2-217ENST00000492883 A8MUU9 505 aa7.42□□□□□ -1.22
CCM2-217ENST00000492883 C8orf87E5RJ46 101 aa7.42□□□□□ -1.22
CCM2-217ENST00000492883 A8MWP4 228 aa7.41□□□□□ -1.22
CCM2-217ENST00000492883 KRTAP16-1A8MUX0 517 aa7.39□□□□□ -1.23
CCM2-217ENST00000492883 IGKV3D-7A0A0C4DH55 119 aa7.37□□□□□ -1.23
CCM2-217ENST00000492883 ETDBQ3ZM63 59 aa7.36□□□□□ -1.23
CCM2-217ENST00000492883 BPY2O14599 106 aa7.35□□□□□ -1.23
CCM2-217ENST00000492883 Q6ZVQ6 151 aa7.35□□□□□ -1.23
CCM2-217ENST00000492883 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
CCM2-217ENST00000492883 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
CCM2-217ENST00000492883 UBL5Q9BZL1 73 aa7.32□□□□□ -1.24
CCM2-217ENST00000492883 LINC00846Q9NV44 126 aa7.32□□□□□ -1.24
CCM2-217ENST00000492883 K7EQZ3 153 aa7.29□□□□□ -1.24
CCM2-217ENST00000492883 A0A1B0GV90 55 aa7.27□□□□□ -1.25
CCM2-217ENST00000492883 Q8N9P0 234 aaPredicted RBP7.27□□□□□ -1.25
CCM2-217ENST00000492883 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
CCM2-217ENST00000492883 LCE2AQ5TA79 106 aaPredicted RBP7.25□□□□□ -1.25
CCM2-217ENST00000492883 hDV103S1A0JD37 113 aa7.24□□□□□ -1.25
CCM2-217ENST00000492883 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
CCM2-217ENST00000492883 COX6B2Q6YFQ2 88 aa7.24□□□□□ -1.25
CCM2-217ENST00000492883 Q8N9L7 120 aa7.24□□□□□ -1.25
CCM2-217ENST00000492883 TMEM254Q8TBM7 123 aa7.24□□□□□ -1.25
CCM2-217ENST00000492883 ZCCHC13Q8WW36 166 aaKnown RBP7.24□□□□□ -1.25
CCM2-217ENST00000492883 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
CCM2-217ENST00000492883 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
CCM2-217ENST00000492883 FAT4Q6V0I7 4981 aa7.22□□□□□ -1.25
CCM2-217ENST00000492883 NDUFS5O43920 106 aa7.21□□□□□ -1.26
CCM2-217ENST00000492883 WFDC13Q8IUB5 93 aa7.2□□□□□ -1.26
CCM2-217ENST00000492883 ACYP1P07311 99 aa7.19□□□□□ -1.26
CCM2-217ENST00000492883 CASC2Q6XLA1 102 aa7.19□□□□□ -1.26
CCM2-217ENST00000492883 CXCL6P80162 114 aa7.16□□□□□ -1.26
CCM2-217ENST00000492883 FAM240AA0A1B0GVK7 77 aa7.14□□□□□ -1.27
CCM2-217ENST00000492883 HCG22E2RYF7 251 aa7.14□□□□□ -1.27
CCM2-217ENST00000492883 SPINK7P58062 85 aa7.14□□□□□ -1.27
CCM2-217ENST00000492883 MT1HP80294 61 aa7.14□□□□□ -1.27
CCM2-217ENST00000492883 HRES1P13985 223 aa7.11□□□□□ -1.27
CCM2-217ENST00000492883 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
CCM2-217ENST00000492883 FAM236DA0A1B0GTK5 79 aa7.1□□□□□ -1.27
CCM2-217ENST00000492883 M0R2T5 61 aa7.1□□□□□ -1.27
CCM2-217ENST00000492883 FAM236CP0DP71 79 aa7.1□□□□□ -1.27
CCM2-217ENST00000492883 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
CCM2-217ENST00000492883 Q5W150 140 aa7.06□□□□□ -1.28
CCM2-217ENST00000492883 MPLKIPQ8TAP9 179 aa7.06□□□□□ -1.28
CCM2-217ENST00000492883 J3QR89 54 aa7.04□□□□□ -1.28
CCM2-217ENST00000492883 HIST1H4AP62805 103 aaKnown RBP7.03□□□□□ -1.28
CCM2-217ENST00000492883 LINC00643Q86TS7 51 aa7.03□□□□□ -1.28
CCM2-217ENST00000492883 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
CCM2-217ENST00000492883 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
CCM2-217ENST00000492883 TP53AIP1Q9HCN2 124 aa7□□□□□ -1.29
CCM2-217ENST00000492883 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
CCM2-217ENST00000492883 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
CCM2-217ENST00000492883 LCE2BO14633 110 aa6.94□□□□□ -1.3
CCM2-217ENST00000492883 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
CCM2-217ENST00000492883 A0A087WVE0 104 aa6.92□□□□□ -1.3
CCM2-217ENST00000492883 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
CCM2-217ENST00000492883 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
CCM2-217ENST00000492883 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
CCM2-217ENST00000492883 K7ERU9 68 aa6.86□□□□□ -1.31
CCM2-217ENST00000492883 UQCRQO14949 82 aa6.86□□□□□ -1.31
CCM2-217ENST00000492883 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
CCM2-217ENST00000492883 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
CCM2-217ENST00000492883 CYP4F30PQ9H0H9 118 aa6.81□□□□□ -1.32
CCM2-217ENST00000492883 LOC101927531A0A1B0GV80 90 aa6.8□□□□□ -1.32
CCM2-217ENST00000492883 H0Y9P7 68 aa6.8□□□□□ -1.32
CCM2-217ENST00000492883 ATOX1O00244 68 aa6.79□□□□□ -1.32
CCM2-217ENST00000492883 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
CCM2-217ENST00000492883 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
CCM2-217ENST00000492883 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
CCM2-217ENST00000492883 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
CCM2-217ENST00000492883 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
CCM2-217ENST00000492883 MT-ATP8P03928 68 aa6.74□□□□□ -1.33
CCM2-217ENST00000492883 MP68P56378 58 aa6.74□□□□□ -1.33
CCM2-217ENST00000492883 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
CCM2-217ENST00000492883 LINC00208Q96KT6 92 aa6.73□□□□□ -1.33
CCM2-217ENST00000492883 MT2AP02795 61 aa6.71□□□□□ -1.34
CCM2-217ENST00000492883 C5orf47Q569G3 176 aa6.71□□□□□ -1.34
CCM2-217ENST00000492883 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
CCM2-217ENST00000492883 S4R3F8 94 aa6.68□□□□□ -1.34
CCM2-217ENST00000492883 MT1FP04733 61 aa6.67□□□□□ -1.34
CCM2-217ENST00000492883 H3BPC8 53 aa6.64□□□□□ -1.35
CCM2-217ENST00000492883 FAM236AA0A1B0GUQ0 79 aa6.63□□□□□ -1.35
CCM2-217ENST00000492883 FAM236BA0A1B0GV22 79 aa6.63□□□□□ -1.35
CCM2-217ENST00000492883 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
CCM2-217ENST00000492883 CSAG1Q6PB30 78 aa6.62□□□□□ -1.35
CCM2-217ENST00000492883 LCA10Q71F78 164 aa6.62□□□□□ -1.35
CCM2-217ENST00000492883 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
CCM2-217ENST00000492883 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms