RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
CDC42SE1-205ENST00000491825 J3KT08 172 aa8.12□□□□□ -1.11
CDC42SE1-205ENST00000491825 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-205ENST00000491825 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
CDC42SE1-205ENST00000491825 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
CDC42SE1-205ENST00000491825 ETDBQ3ZM63 59 aa8.09□□□□□ -1.11
CDC42SE1-205ENST00000491825 A0A1B0GV90 55 aa8.07□□□□□ -1.12
CDC42SE1-205ENST00000491825 NREPQ16612 68 aa8.07□□□□□ -1.12
CDC42SE1-205ENST00000491825 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-205ENST00000491825 A0A1B0GVX0 72 aa8.05□□□□□ -1.12
CDC42SE1-205ENST00000491825 A8MWP4 228 aa8.03□□□□□ -1.12
CDC42SE1-205ENST00000491825 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
CDC42SE1-205ENST00000491825 LINC00313P59037 77 aa8.03□□□□□ -1.12
CDC42SE1-205ENST00000491825 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
CDC42SE1-205ENST00000491825 Q75L30 129 aa8.03□□□□□ -1.12
CDC42SE1-205ENST00000491825 IGHV6-1A0A0B4J1U7 121 aa8.02□□□□□ -1.13
CDC42SE1-205ENST00000491825 DSCR10P59022 87 aa8.02□□□□□ -1.13
CDC42SE1-205ENST00000491825 MT1HP80294 61 aa8.02□□□□□ -1.13
CDC42SE1-205ENST00000491825 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
CDC42SE1-205ENST00000491825 FSIP2Q5CZC0 6907 aa8.02□□□□□ -1.13
CDC42SE1-205ENST00000491825 NDUFB1O75438 58 aa8.01□□□□□ -1.13
CDC42SE1-205ENST00000491825 Q6ZVQ6 151 aa8.01□□□□□ -1.13
CDC42SE1-205ENST00000491825 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
CDC42SE1-205ENST00000491825 LINC00846Q9NV44 126 aa8□□□□□ -1.13
CDC42SE1-205ENST00000491825 A8MUU9 505 aa7.99□□□□□ -1.13
CDC42SE1-205ENST00000491825 NOTCH2NLQ7Z3S9 236 aa7.99□□□□□ -1.13
CDC42SE1-205ENST00000491825 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
CDC42SE1-205ENST00000491825 IGKV3D-7A0A0C4DH55 119 aa7.98□□□□□ -1.13
CDC42SE1-205ENST00000491825 BPY2O14599 106 aa7.97□□□□□ -1.13
CDC42SE1-205ENST00000491825 PRR15Q8IV56 129 aa7.97□□□□□ -1.13
CDC42SE1-205ENST00000491825 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.14
CDC42SE1-205ENST00000491825 FAM240AA0A1B0GVK7 77 aa7.94□□□□□ -1.14
CDC42SE1-205ENST00000491825 K7EQZ3 153 aa7.93□□□□□ -1.14
CDC42SE1-205ENST00000491825 ACYP1P07311 99 aa7.93□□□□□ -1.14
CDC42SE1-205ENST00000491825 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
CDC42SE1-205ENST00000491825 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
CDC42SE1-205ENST00000491825 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-205ENST00000491825 LORP23490 312 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE1-205ENST00000491825 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
CDC42SE1-205ENST00000491825 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE1-205ENST00000491825 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE1-205ENST00000491825 CXCL6P80162 114 aa7.87□□□□□ -1.15
CDC42SE1-205ENST00000491825 Q8N9L7 120 aa7.85□□□□□ -1.15
CDC42SE1-205ENST00000491825 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
CDC42SE1-205ENST00000491825 hDV103S1A0JD37 113 aa7.83□□□□□ -1.16
CDC42SE1-205ENST00000491825 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
CDC42SE1-205ENST00000491825 ATP5EP2Q5VTU8 51 aa7.81□□□□□ -1.16
CDC42SE1-205ENST00000491825 J3QR89 54 aa7.78□□□□□ -1.16
CDC42SE1-205ENST00000491825 CASC2Q6XLA1 102 aa7.78□□□□□ -1.16
CDC42SE1-205ENST00000491825 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-205ENST00000491825 HCG22E2RYF7 251 aa7.77□□□□□ -1.17
CDC42SE1-205ENST00000491825 M0R2T5 61 aa7.76□□□□□ -1.17
CDC42SE1-205ENST00000491825 COX6B2Q6YFQ2 88 aa7.76□□□□□ -1.17
CDC42SE1-205ENST00000491825 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
CDC42SE1-205ENST00000491825 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
CDC42SE1-205ENST00000491825 NDUFS5O43920 106 aa7.71□□□□□ -1.18
CDC42SE1-205ENST00000491825 K7ERU9 68 aa7.64□□□□□ -1.19
CDC42SE1-205ENST00000491825 SPINK7P58062 85 aa7.64□□□□□ -1.19
CDC42SE1-205ENST00000491825 HIST1H4AP62805 103 aaKnown RBP7.64□□□□□ -1.19
CDC42SE1-205ENST00000491825 HRES1P13985 223 aa7.63□□□□□ -1.19
CDC42SE1-205ENST00000491825 MPLKIPQ8TAP9 179 aa7.63□□□□□ -1.19
CDC42SE1-205ENST00000491825 Q5W150 140 aa7.62□□□□□ -1.19
CDC42SE1-205ENST00000491825 TP53AIP1Q9HCN2 124 aa7.62□□□□□ -1.19
CDC42SE1-205ENST00000491825 A0A087WVE0 104 aa7.57□□□□□ -1.2
CDC42SE1-205ENST00000491825 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
CDC42SE1-205ENST00000491825 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
CDC42SE1-205ENST00000491825 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
CDC42SE1-205ENST00000491825 USH2AO75445 5202 aa7.55□□□□□ -1.2
CDC42SE1-205ENST00000491825 SSPOA2VEC9 5147 aa7.54□□□□□ -1.2
CDC42SE1-205ENST00000491825 IGKV2D-30A0A075B6S6 120 aa7.52□□□□□ -1.21
CDC42SE1-205ENST00000491825 IGKV2-30P06310 120 aa7.52□□□□□ -1.21
CDC42SE1-205ENST00000491825 IMUPQ9GZP8 106 aa7.51□□□□□ -1.21
CDC42SE1-205ENST00000491825 TRAV22A0A0B4J277 110 aa7.49□□□□□ -1.21
CDC42SE1-205ENST00000491825 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
CDC42SE1-205ENST00000491825 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
CDC42SE1-205ENST00000491825 UQCRQO14949 82 aa7.48□□□□□ -1.21
CDC42SE1-205ENST00000491825 MT-ATP8P03928 68 aa7.46□□□□□ -1.22
CDC42SE1-205ENST00000491825 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
CDC42SE1-205ENST00000491825 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
CDC42SE1-205ENST00000491825 ATOX1O00244 68 aa7.43□□□□□ -1.22
CDC42SE1-205ENST00000491825 MT2AP02795 61 aa7.43□□□□□ -1.22
CDC42SE1-205ENST00000491825 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
CDC42SE1-205ENST00000491825 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
CDC42SE1-205ENST00000491825 H0Y9P7 68 aa7.39□□□□□ -1.23
CDC42SE1-205ENST00000491825 CYP4F30PQ9H0H9 118 aa7.38□□□□□ -1.23
CDC42SE1-205ENST00000491825 FCGBPQ9Y6R7 5405 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-205ENST00000491825 MT1FP04733 61 aa7.37□□□□□ -1.23
CDC42SE1-205ENST00000491825 SCGB1A1P11684 91 aa7.37□□□□□ -1.23
CDC42SE1-205ENST00000491825 C4orf26Q17RF5 130 aa7.36□□□□□ -1.23
CDC42SE1-205ENST00000491825 LCE2BO14633 110 aa7.34□□□□□ -1.23
CDC42SE1-205ENST00000491825 H1FX-AS1Q4G0G2 97 aa7.34□□□□□ -1.23
CDC42SE1-205ENST00000491825 C5orf47Q569G3 176 aa7.34□□□□□ -1.23
CDC42SE1-205ENST00000491825 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
CDC42SE1-205ENST00000491825 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
CDC42SE1-205ENST00000491825 MP68P56378 58 aa7.33□□□□□ -1.24
CDC42SE1-205ENST00000491825 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
CDC42SE1-205ENST00000491825 C1orf64Q8NEQ6 169 aa7.31□□□□□ -1.24
CDC42SE1-205ENST00000491825 H3BPC8 53 aa7.3□□□□□ -1.24
CDC42SE1-205ENST00000491825 SMIM20Q8N5G0 67 aa7.3□□□□□ -1.24
CDC42SE1-205ENST00000491825 LINC00208Q96KT6 92 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms