RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 NREPQ16612 68 aa10.49□□□□□ -0.73
SEC22A-209ENST00000491366 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
SEC22A-209ENST00000491366 F8W1H4 67 aa10.48□□□□□ -0.73
SEC22A-209ENST00000491366 MUC2Q02817 5179 aa10.47□□□□□ -0.73
SEC22A-209ENST00000491366 A0A1B0GVX0 72 aa10.47□□□□□ -0.73
SEC22A-209ENST00000491366 NOTCH2NLQ7Z3S9 236 aa10.46□□□□□ -0.73
SEC22A-209ENST00000491366 Q75L30 129 aa10.45□□□□□ -0.74
SEC22A-209ENST00000491366 NDUFB1O75438 58 aa10.42□□□□□ -0.74
SEC22A-209ENST00000491366 ETDBQ3ZM63 59 aa10.42□□□□□ -0.74
SEC22A-209ENST00000491366 C20orf166-AS1Q96NR2 134 aa10.42□□□□□ -0.74
SEC22A-209ENST00000491366 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
SEC22A-209ENST00000491366 A0A0U1RQV1 116 aa10.4□□□□□ -0.74
SEC22A-209ENST00000491366 A8MUU9 505 aa10.4□□□□□ -0.74
SEC22A-209ENST00000491366 KRTAP16-1A8MUX0 517 aa10.4□□□□□ -0.74
SEC22A-209ENST00000491366 A8MWP4 228 aa10.4□□□□□ -0.74
SEC22A-209ENST00000491366 C8orf87E5RJ46 101 aa10.4□□□□□ -0.74
SEC22A-209ENST00000491366 IGKV3D-7A0A0C4DH55 119 aa10.37□□□□□ -0.75
SEC22A-209ENST00000491366 Q6ZVQ6 151 aa10.36□□□□□ -0.75
SEC22A-209ENST00000491366 BPY2O14599 106 aa10.33□□□□□ -0.76
SEC22A-209ENST00000491366 LINC00846Q9NV44 126 aa10.33□□□□□ -0.76
SEC22A-209ENST00000491366 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
SEC22A-209ENST00000491366 C8orf17Q9NRJ1 99 aa10.32□□□□□ -0.76
SEC22A-209ENST00000491366 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
SEC22A-209ENST00000491366 K7EQZ3 153 aa10.29□□□□□ -0.76
SEC22A-209ENST00000491366 Q8N9L7 120 aa10.24□□□□□ -0.77
SEC22A-209ENST00000491366 MMP24-AS1A0A0U1RRL7 71 aa10.23□□□□□ -0.77
SEC22A-209ENST00000491366 FAT4Q6V0I7 4981 aa10.2□□□□□ -0.78
SEC22A-209ENST00000491366 Q8N9P0 234 aaPredicted RBP10.19□□□□□ -0.78
SEC22A-209ENST00000491366 TMEM254Q8TBM7 123 aa10.18□□□□□ -0.78
SEC22A-209ENST00000491366 hDV103S1A0JD37 113 aa10.17□□□□□ -0.78
SEC22A-209ENST00000491366 MRPL34Q9BQ48 92 aaKnown RBP10.16□□□□□ -0.78
SEC22A-209ENST00000491366 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
SEC22A-209ENST00000491366 KRTAP19-2Q3LHN2 52 aa10.14□□□□□ -0.79
SEC22A-209ENST00000491366 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
SEC22A-209ENST00000491366 ACYP1P07311 99 aa10.13□□□□□ -0.79
SEC22A-209ENST00000491366 NDUFS5O43920 106 aa10.12□□□□□ -0.79
SEC22A-209ENST00000491366 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
SEC22A-209ENST00000491366 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
SEC22A-209ENST00000491366 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
SEC22A-209ENST00000491366 COX6B2Q6YFQ2 88 aa10.1□□□□□ -0.79
SEC22A-209ENST00000491366 FAM240AA0A1B0GVK7 77 aa10.09□□□□□ -0.79
SEC22A-209ENST00000491366 CXCL6P80162 114 aa10.08□□□□□ -0.8
SEC22A-209ENST00000491366 HCG22E2RYF7 251 aa10.05□□□□□ -0.8
SEC22A-209ENST00000491366 J3QR89 54 aa10.02□□□□□ -0.81
SEC22A-209ENST00000491366 SPINK7P58062 85 aa9.99□□□□□ -0.81
SEC22A-209ENST00000491366 MT1HP80294 61 aa9.98□□□□□ -0.81
SEC22A-209ENST00000491366 HRES1P13985 223 aa9.97□□□□□ -0.81
SEC22A-209ENST00000491366 ATP5EP2Q5VTU8 51 aa9.97□□□□□ -0.81
SEC22A-209ENST00000491366 FAM236DA0A1B0GTK5 79 aa9.93□□□□□ -0.82
SEC22A-209ENST00000491366 FAM236CP0DP71 79 aa9.93□□□□□ -0.82
SEC22A-209ENST00000491366 Q5W150 140 aa9.93□□□□□ -0.82
SEC22A-209ENST00000491366 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
SEC22A-209ENST00000491366 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
SEC22A-209ENST00000491366 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
SEC22A-209ENST00000491366 K7ERU9 68 aa9.9□□□□□ -0.82
SEC22A-209ENST00000491366 MPLKIPQ8TAP9 179 aa9.89□□□□□ -0.83
SEC22A-209ENST00000491366 M0R2T5 61 aa9.88□□□□□ -0.83
SEC22A-209ENST00000491366 IGKV2D-30A0A075B6S6 120 aa9.87□□□□□ -0.83
SEC22A-209ENST00000491366 IGKV2-30P06310 120 aa9.87□□□□□ -0.83
SEC22A-209ENST00000491366 TP53AIP1Q9HCN2 124 aa9.82□□□□□ -0.84
SEC22A-209ENST00000491366 A0A087WVE0 104 aa9.81□□□□□ -0.84
SEC22A-209ENST00000491366 C7orf65Q6ZTY9 151 aa9.81□□□□□ -0.84
SEC22A-209ENST00000491366 FLGP20930 4061 aaPredicted RBP9.81□□□□□ -0.84
SEC22A-209ENST00000491366 KRTAP10-6P60371 365 aaPredicted RBP9.73□□□□□ -0.85
SEC22A-209ENST00000491366 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
SEC22A-209ENST00000491366 TRAV22A0A0B4J277 110 aa9.66□□□□□ -0.86
SEC22A-209ENST00000491366 C4orf26Q17RF5 130 aa9.65□□□□□ -0.86
SEC22A-209ENST00000491366 UQCRQO14949 82 aa9.64□□□□□ -0.87
SEC22A-209ENST00000491366 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
SEC22A-209ENST00000491366 MT-ATP8P03928 68 aa9.61□□□□□ -0.87
SEC22A-209ENST00000491366 H0Y9P7 68 aa9.6□□□□□ -0.87
SEC22A-209ENST00000491366 H1FX-AS1Q4G0G2 97 aa9.59□□□□□ -0.87
SEC22A-209ENST00000491366 LOC101927531A0A1B0GV80 90 aa9.57□□□□□ -0.88
SEC22A-209ENST00000491366 CYP4F30PQ9H0H9 118 aa9.57□□□□□ -0.88
SEC22A-209ENST00000491366 IMUPQ9GZP8 106 aa9.56□□□□□ -0.88
SEC22A-209ENST00000491366 ATOX1O00244 68 aa9.55□□□□□ -0.88
SEC22A-209ENST00000491366 KRTAP9-2Q9BYQ4 174 aa9.55□□□□□ -0.88
SEC22A-209ENST00000491366 OCR1Q9BZK8 76 aa9.55□□□□□ -0.88
SEC22A-209ENST00000491366 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
SEC22A-209ENST00000491366 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
SEC22A-209ENST00000491366 KRTAP9-8Q9BYQ0 159 aa9.48□□□□□ -0.89
SEC22A-209ENST00000491366 MP68P56378 58 aa9.47□□□□□ -0.89
SEC22A-209ENST00000491366 LINC00208Q96KT6 92 aa9.47□□□□□ -0.89
SEC22A-209ENST00000491366 KRTAP3-1Q9BYR8 98 aa9.47□□□□□ -0.89
SEC22A-209ENST00000491366 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
SEC22A-209ENST00000491366 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
SEC22A-209ENST00000491366 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
SEC22A-209ENST00000491366 MT2AP02795 61 aa9.41□□□□□ -0.9
SEC22A-209ENST00000491366 S4R3F8 94 aa9.37□□□□□ -0.91
SEC22A-209ENST00000491366 KLKP1Q107X0 134 aa9.36□□□□□ -0.91
SEC22A-209ENST00000491366 MT1FP04733 61 aa9.34□□□□□ -0.91
SEC22A-209ENST00000491366 H3BPC8 53 aa9.33□□□□□ -0.92
SEC22A-209ENST00000491366 KRTAP10-10P60014 251 aa9.33□□□□□ -0.92
SEC22A-209ENST00000491366 LCA10Q71F78 164 aa9.31□□□□□ -0.92
SEC22A-209ENST00000491366 SMIM20Q8N5G0 67 aa9.31□□□□□ -0.92
SEC22A-209ENST00000491366 TRAV7A0A075B6U4 112 aa9.29□□□□□ -0.92
SEC22A-209ENST00000491366 CSAG1Q6PB30 78 aa9.23□□□□□ -0.93
SEC22A-209ENST00000491366 A8MUN3 132 aa9.2□□□□□ -0.94
SEC22A-209ENST00000491366 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
SEC22A-209ENST00000491366 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms