RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 BATFQ16520 125 aa8.58□□□□□ -1.04
PDLIM2-217ENST00000491330 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
PDLIM2-217ENST00000491330 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
PDLIM2-217ENST00000491330 Q6ZQT0 140 aa8.57□□□□□ -1.04
PDLIM2-217ENST00000491330 NAA38Q9BRA0 125 aaKnown RBP8.57□□□□□ -1.04
PDLIM2-217ENST00000491330 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
PDLIM2-217ENST00000491330 FAM236DA0A1B0GTK5 79 aa8.55□□□□□ -1.04
PDLIM2-217ENST00000491330 H3BT86 120 aa8.55□□□□□ -1.04
PDLIM2-217ENST00000491330 FAM236CP0DP71 79 aa8.55□□□□□ -1.04
PDLIM2-217ENST00000491330 DEFB116Q30KQ4 102 aa8.55□□□□□ -1.04
PDLIM2-217ENST00000491330 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
PDLIM2-217ENST00000491330 CRCT1Q9UGL9 99 aa8.54□□□□□ -1.04
PDLIM2-217ENST00000491330 NDUFB1O75438 58 aa8.53□□□□□ -1.04
PDLIM2-217ENST00000491330 A0A1B0GVX0 72 aa8.52□□□□□ -1.05
PDLIM2-217ENST00000491330 A0A1W2PPM0 123 aa8.52□□□□□ -1.05
PDLIM2-217ENST00000491330 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
PDLIM2-217ENST00000491330 TAX1BP3O14907 124 aa8.5□□□□□ -1.05
PDLIM2-217ENST00000491330 MTURNQ8N3F0 131 aa8.49□□□□□ -1.05
PDLIM2-217ENST00000491330 C14orf132Q9NPU4 83 aa8.48□□□□□ -1.05
PDLIM2-217ENST00000491330 A8MWP4 228 aa8.44□□□□□ -1.06
PDLIM2-217ENST00000491330 NREPQ16612 68 aa8.43□□□□□ -1.06
PDLIM2-217ENST00000491330 COL5A1-AS1Q5SY13 56 aa8.43□□□□□ -1.06
PDLIM2-217ENST00000491330 NOTCH2NLQ7Z3S9 236 aa8.42□□□□□ -1.06
PDLIM2-217ENST00000491330 SPCS1Q9Y6A9 102 aa8.41□□□□□ -1.06
PDLIM2-217ENST00000491330 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
PDLIM2-217ENST00000491330 Q8N9P0 234 aaPredicted RBP8.38□□□□□ -1.07
PDLIM2-217ENST00000491330 ZCCHC13Q8WW36 166 aaKnown RBP8.37□□□□□ -1.07
PDLIM2-217ENST00000491330 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
PDLIM2-217ENST00000491330 PRR15Q8IV56 129 aa8.36□□□□□ -1.07
PDLIM2-217ENST00000491330 C8orf17Q9NRJ1 99 aa8.36□□□□□ -1.07
PDLIM2-217ENST00000491330 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
PDLIM2-217ENST00000491330 HRES1P13985 223 aa8.31□□□□□ -1.08
PDLIM2-217ENST00000491330 SPINK7P58062 85 aa8.31□□□□□ -1.08
PDLIM2-217ENST00000491330 Q6ZVQ6 151 aa8.31□□□□□ -1.08
PDLIM2-217ENST00000491330 K7EP34 96 aa8.29□□□□□ -1.08
PDLIM2-217ENST00000491330 BPY2O14599 106 aa8.29□□□□□ -1.08
PDLIM2-217ENST00000491330 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
PDLIM2-217ENST00000491330 GTF2H5Q6ZYL4 71 aa8.28□□□□□ -1.08
PDLIM2-217ENST00000491330 MPLKIPQ8TAP9 179 aa8.28□□□□□ -1.08
PDLIM2-217ENST00000491330 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
PDLIM2-217ENST00000491330 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
PDLIM2-217ENST00000491330 hDV103S1A0JD37 113 aa8.24□□□□□ -1.09
PDLIM2-217ENST00000491330 SMCPP49901 116 aaPredicted RBP8.24□□□□□ -1.09
PDLIM2-217ENST00000491330 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
PDLIM2-217ENST00000491330 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
PDLIM2-217ENST00000491330 UBL5Q9BZL1 73 aa8.23□□□□□ -1.09
PDLIM2-217ENST00000491330 F8W1H4 67 aa8.22□□□□□ -1.09
PDLIM2-217ENST00000491330 K7EQZ3 153 aa8.22□□□□□ -1.09
PDLIM2-217ENST00000491330 NDUFS5O43920 106 aa8.22□□□□□ -1.09
PDLIM2-217ENST00000491330 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
PDLIM2-217ENST00000491330 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
PDLIM2-217ENST00000491330 MT2AP02795 61 aa8.14□□□□□ -1.11
PDLIM2-217ENST00000491330 PCP4L1A6NKN8 68 aa8.13□□□□□ -1.11
PDLIM2-217ENST00000491330 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
PDLIM2-217ENST00000491330 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
PDLIM2-217ENST00000491330 CXCL6P80162 114 aa8.09□□□□□ -1.11
PDLIM2-217ENST00000491330 HCG22E2RYF7 251 aa8.06□□□□□ -1.12
PDLIM2-217ENST00000491330 ETDBQ3ZM63 59 aa8.06□□□□□ -1.12
PDLIM2-217ENST00000491330 C7orf65Q6ZTY9 151 aa8.06□□□□□ -1.12
PDLIM2-217ENST00000491330 IGKV2D-30A0A075B6S6 120 aa8.05□□□□□ -1.12
PDLIM2-217ENST00000491330 MT1FP04733 61 aa8.05□□□□□ -1.12
PDLIM2-217ENST00000491330 IGKV2-30P06310 120 aa8.05□□□□□ -1.12
PDLIM2-217ENST00000491330 H1FX-AS1Q4G0G2 97 aa8.05□□□□□ -1.12
PDLIM2-217ENST00000491330 Q8N9L7 120 aa8.05□□□□□ -1.12
PDLIM2-217ENST00000491330 ACYP1P07311 99 aa8.04□□□□□ -1.12
PDLIM2-217ENST00000491330 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
PDLIM2-217ENST00000491330 FAM240AA0A1B0GVK7 77 aa7.99□□□□□ -1.13
PDLIM2-217ENST00000491330 Q5W150 140 aa7.98□□□□□ -1.13
PDLIM2-217ENST00000491330 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
PDLIM2-217ENST00000491330 ATP5EP2Q5VTU8 51 aa7.95□□□□□ -1.14
PDLIM2-217ENST00000491330 LCE2BO14633 110 aa7.92□□□□□ -1.14
PDLIM2-217ENST00000491330 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.9□□□□□ -1.14
PDLIM2-217ENST00000491330 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
PDLIM2-217ENST00000491330 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
PDLIM2-217ENST00000491330 C4orf26Q17RF5 130 aa7.86□□□□□ -1.15
PDLIM2-217ENST00000491330 USH2AO75445 5202 aa7.86□□□□□ -1.15
PDLIM2-217ENST00000491330 LINC00643Q86TS7 51 aa7.79□□□□□ -1.16
PDLIM2-217ENST00000491330 TRAV22A0A0B4J277 110 aa7.78□□□□□ -1.16
PDLIM2-217ENST00000491330 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
PDLIM2-217ENST00000491330 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
PDLIM2-217ENST00000491330 SSPOA2VEC9 5147 aa7.77□□□□□ -1.17
PDLIM2-217ENST00000491330 CSAG1Q6PB30 78 aa7.77□□□□□ -1.17
PDLIM2-217ENST00000491330 C1orf64Q8NEQ6 169 aa7.76□□□□□ -1.17
PDLIM2-217ENST00000491330 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
PDLIM2-217ENST00000491330 HIST1H4AP62805 103 aaKnown RBP7.75□□□□□ -1.17
PDLIM2-217ENST00000491330 C5orf47Q569G3 176 aa7.75□□□□□ -1.17
PDLIM2-217ENST00000491330 S4R3F8 94 aa7.75□□□□□ -1.17
PDLIM2-217ENST00000491330 J3QR89 54 aa7.74□□□□□ -1.17
PDLIM2-217ENST00000491330 ATOX1O00244 68 aa7.74□□□□□ -1.17
PDLIM2-217ENST00000491330 UQCRQO14949 82 aa7.74□□□□□ -1.17
PDLIM2-217ENST00000491330 KRTAP19-6Q3LI70 58 aa7.74□□□□□ -1.17
PDLIM2-217ENST00000491330 CYP4F30PQ9H0H9 118 aa7.72□□□□□ -1.17
PDLIM2-217ENST00000491330 A0A1B0GV90 55 aa7.7□□□□□ -1.18
PDLIM2-217ENST00000491330 FCGBPQ9Y6R7 5405 aaPredicted RBP7.68□□□□□ -1.18
PDLIM2-217ENST00000491330 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
PDLIM2-217ENST00000491330 H0Y9P7 68 aa7.62□□□□□ -1.19
PDLIM2-217ENST00000491330 LCA10Q71F78 164 aa7.61□□□□□ -1.19
PDLIM2-217ENST00000491330 A0A087WVE0 104 aa7.58□□□□□ -1.2
PDLIM2-217ENST00000491330 A8MUN3 132 aa7.57□□□□□ -1.2
PDLIM2-217ENST00000491330 MP68P56378 58 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms